Drosophila navojoa: 108653606
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Entry
108653606 CDS
T05898
Name
(RefSeq) probable nucleoporin Nup54 isoform X2
KO
K14308
nuclear pore complex protein Nup54
Organism
dnv
Drosophila navojoa
Pathway
dnv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108653606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108653606
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108653606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF3135
Gp49
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
108653606
NCBI-ProteinID:
XP_017959732
UniProt:
A0A484BUS2
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MSFFGGNTSLGATSTPAKPGGMFGSAFGATSGAAAPAFGSNISTPAFGTAPTAFGAPTSA
PAATLGGGFGGFGTAAQTNQSSLFSTPASSAPPAFSGFGQLPTSSNAPASGFSGFGATTT
TTPSFGGFGASQTSAFGGSTFGSAFGKPAAPTVTPGFGGFGGTNFMLGQPQQQPVPISAD
EAFAQAILNVAIFGDERDNIVAKWNYLQAMWGTGKLFYSQSAAPVDITQENYLCRFKAIG
YSRMPGKDNKLGLVALNFDRDLATIKTQQQQIVQTLHSLMGSKPHLLVHIDVLKELENKK
CQMVIYVEEKVQIPHGPHDSKRILATELATYLNQATVKPQLTNLGLTEALALTLPDEDQL
KEYLENPPRSVDPRMWRQANLDNPDATQFIPVPMIGFNDLKWRVKCQEQETDTHALYMKK
VEGELQELRRRHASATARIMEHKRKLAEMSHRILRIVVKQECTRKVGTTLTPEEEALRTK
LQNMQAVVSAPTQFKGRLSELLSQIRMQRSQFSSTGLPEYALDKSAEDEMRSIMTMQQRA
MEVLKETVNKDMEALDIIIKGLPELQQT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcattctttggtggcaacacatctttgggtgcgacaagcacgccggctaaaccgggc
ggtatgtttggctcagcgtttggtgcgacaagcggagctgcggcaccggcatttggaagc
aatatatcaacgcctgcgtttggtaccgcacccacagctttcggtgctccaacaagtgcg
cccgctgcaacactgggcggtggatttggtggctttggcacggcagcacagacaaaccag
tccagtttattttctacgcccgcaagctcagccccgcctgctttcagtggatttggacag
ctaccaacgtcgagcaacgcgcctgctagcggattctcaggatttggagcaacaacgact
accacaccatcatttggtggctttggcgccagccagacgtcagcatttggtggtagcact
ttcggatcagctttcggaaaaccagctgcgccgacagtcacgcccggctttggaggcttt
ggcggtacaaactttatgttgggacagccacagcagcagcctgtgccaatttcagcagat
gaagcgtttgcacaggccattctaaatgtcgccatctttggcgatgagcgtgataatatt
gtagccaaatggaactatctgcaggcaatgtggggcactggcaaactgttttactcccaa
agtgcagcaccagtggacattacgcaggagaattacttatgtcgttttaaagctattggc
tacagtcgcatgcctggcaaggacaacaagctggggcttgtcgcactcaactttgatcga
gacttagcaacgattaagacgcaacagcagcagattgtacaaaccctgcacagtttaatg
ggcagcaagccacatcttttggttcacatcgacgttctcaaagagctggagaacaaaaag
tgccaaatggttatctatgtggaggagaaagtgcagattccgcatggtccacatgatagc
aagcgaatacttgccactgagctggccacttatttaaatcaggcaacagtgaagccacag
ttgacgaatctgggattgacggaagccttggcacttacgctacccgatgaggatcaattg
aaagaatacctagagaatcccccgcgcagcgttgacccacgcatgtggcggcaagcaaat
ttagacaatccagatgccactcaatttatacctgtgcccatgattggtttcaacgatttg
aaatggcgtgtcaaatgccaggaacaggagacagatacgcatgcgctgtacatgaagaaa
gtggaaggagagttacaggaactgcggcgacgccatgcttccgcaacagccaggataatg
gaacacaaacggaagctagctgaaatgagccatcgcatacttaggatcgttgtgaaacaa
gaatgcacccgcaaggtgggcacaacattgacgcctgaggaggaggcactgcgcactaag
ctgcagaatatgcaggctgttgtttctgcgcccactcagttcaagggccggctgagcgag
ctactctcccagattcggatgcagcgcagccaattttctagcactggcctgccggaatat
gcattagataaaagcgccgaagatgagatgagaagcataatgacaatgcagcagcgcgcc
atggaagtgctgaaagaaacagttaacaaagatatggaagcactggatattatcataaaa
gggttgcccgagttacagcaaacatga
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