Drosophila navojoa: 108654531
Help
Entry
108654531 CDS
T05898
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
dnv
Drosophila navojoa
Pathway
dnv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108654531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnv03041
]
108654531
Spliceosome [BR:
dnv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108654531
Complex C
U5 SnRNP specific factors
108654531
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
108654531
NCBI-ProteinID:
XP_017961463
UniProt:
A0A484BUC8
LinkDB
All DBs
Position
Unknown
AA seq
2397 aa
AA seq
DB search
MSIPPYMIPPNAWAAQLMAQQQAYAAAHAQQAQLHAQHQMANQIQQIPPPGAPLPPAGHA
NGIPVPAQGVPQPQLGQIPTPKPDILTEDKLQEKALKWQHLQSKRFAEKRKFGFVDTQKE
DMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVL
YHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYA
DNVLDVEPLEAIQIELDSDEDNAVYKWFYDHRPLVDTPYVNGSTYRKWNLSLPQLATLYR
LANQLLTDLVDNNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDHNVGDEDWNEFNDIN
KVIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPIS
HRNANSKIQEPMPDDDEDFTLPDDVQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSR
RAIDVPLVKCWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKAT
KFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSR
FGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLM
RQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQ
FEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRC
WKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRL
TRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLL
ILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFM
DLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGI
NNLQDVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINY
KDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFQDAVT
ETAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDAR
MRLMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPK
CRTQNEEFTHRDGVWNLQNEITKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKI
VNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTP
KELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEF
IDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIR
TEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKS
YKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERY
ARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGCKTLIQQAMAKIMKANPA
LYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLT
TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK
QIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNL
YDDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKV
EVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQL
TATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKE
TGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINL
PNALPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFT
PGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQGSW
NYNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADREDVYA
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgtctataccgccgtatatgataccgcccaatgcctgggccgcccaactgatggcccag
cagcaggcatatgcggcggcccatgcacagcaggctcagctgcatgctcagcatcagatg
gccaaccagatacagcaaataccaccaccgggcgctccattgcccccagcgggtcatgcc
aatggcattccagtaccggcacagggagtgcctcagccccaactaggtcagataccaacg
ccaaagccggatattctgaccgaagataagctgcaggagaaggcgctcaagtggcagcat
ttgcagtccaagcgatttgctgaaaaacgcaaattcggctttgttgatacacagaaagag
gatatgccgccggagcatatacgcaagatcatacgtgaccacggtgatatgacctctcgc
aaatatcggcacgataagcgcgtctatctgggtgcactcaaatatatgccacatgctgtg
ctgaagcttctcgagaatatgcctatgccctgggagcaaattagagatgtgcaggtgctg
taccacataacaggcgccattacctttgtcaatgagattccctgggtaattgagcccgtc
tacatagcacagtggggcacaatgtggattatgatgcgtcgtgaaaagcgtgatcgtcgt
cacttcaagcgcatgcgtttcccgccctttgatgacgaggagccgccattggactacgca
gacaacgtgctggatgtagagcctctggaggccatacaaatcgagctcgacagcgatgaa
gataatgctgtatacaagtggttctacgatcatagaccattagtcgatacaccctatgta
aatggatccacttaccgcaaatggaatctgtcgttgccacagctggctacgctttatcgt
ctggcaaatcagttgctcaccgacttggtcgacaataatttcttttatctgtttgatcca
aagagcttctttacggccaaagcactcaacatggccatacctggagggcccaagttcgag
ccccttatcaaggatcataatgttggtgatgaggactggaatgagttcaatgacattaat
aaagttattataagacaacccatacgaacggagtatcgcattgcatttccatatctatac
aacaatatgccacattttgtgcatctcagctggtatcacactccaaacgttgtctacatc
aagaccgaggatcctgatttgcctgccttttactttgatcctttaatcaatcccatttcg
catcgtaatgctaactccaagatccaggagcccatgccagacgatgatgaggactttacg
ttgcccgatgatgtgcagccttttctgcaggacacgccgctctatacagacaacacggcg
aatggcattgcgctgctgtgggcaccgcgtcccttcaatatgcgctcgggtcgctcacgt
cgtgctattgatgtgccgctggtcaagtgttggtacaaggaacattgtccacctggtcat
ccggtcaaggtgcgcgtcagctatcagaagctgctcaagtactatgtgctcaacgcattg
aagcaccgcaagccgaagccgcaaaagaaacgctatttgttccgttcattcaaggccacc
aagttcttccaaaccaccaccttggattgggttgaggctggcttgcaggtgtgtcgccag
ggctataatatgctcaatctgcttattcaccgcaagaatcttaactacctgcatttggac
tacaactttaacttgaagccggttaagaccttgaccactaaggagcgtaaaaagtcccgt
ttcggcaatgctttccatttgtgccgtgagattttgcgtctgactaaactgatcattgac
tcgcatgtacagtatcgtctcaataacgtggacgcctttcagctagctgatggcctgcag
tatatctttgcccatgtgggccagctgacgggcatgtatcgctacaaatacaaactgatg
cggcagatacgcatgtgcaaggatttgaagcatttaatctactatcgcttcaacacggga
cccgtgggcaagggccctggctgtggcttctgggcgcctggctggcgtgtttggttgttc
tttatgcgtggcattacaccgctgctcgaacgctggctgggcaacctgttgtcgcgtcaa
ttcgagggtcgtcattcgaagggcgtggccaagacggtgaccaaacagcgtgttgaatcc
catttcgacttggagttgcgtgcctcagttatgcacgatattgtggacatgatgcccgag
ggtattaagcaaaacaaggcgcgtactatactccagcacctgtccgaggcttggcgctgc
tggaaggccaacataccgtggaaggtgcccggtctgcccatacccatagagaacatgata
ttgcgttatgtgaaaatgaaagccgattggtggacgaacacggcgcactacaatcgtgag
cgtatacgtcgtggtgccactgtcgataagacagtctgcaaaaagaatttgggtcgtttg
acgcgtttgtatttgaaggccgagcaggaacggcagcataattacctcaaggatggtcct
tatatatcgcccgaagaggcggtggccatatataccacaacggtacattggttggaatcg
cgtcgctttgcgcccataccctttcctccgttgtcctataagcacgacactaagctgctg
attttggccttggagcgtctgaaggaagcgtacagcgtaaagtcgcgcttgaatcaaagc
cagcgcgaggagctgggtttgattgagcaggcctacgataacccgcacgaggcgttgtcc
cgtatcaaacgtcatctgttgactcaacgtgctttcaaggaggtgggcatcgaatttatg
gatctgtatagccatttaatacctgtttacgaagtggagcccttggagaagatcaccgat
gcctatttggatcagtatctgtggtatgaggcagacaaacgcagactgttcccgccatgg
atcaagcccagcgatacggagccaccaccgctattggcctacaaatggtgtcaaggtatc
aacaatttgcaggatgtctgggacgtcggtgagggcgaatgcaatgtgctgctcgaatca
cgctttgagaagctttacgagaagattgatttgactttgctcaatcgtctgttgcgtctc
attgtggatcacaatatcgccgattatatgacagcgaagaacaacgtcgttattaactac
aaggacatgaatcatacgaacagctatggcattatacgtggcctacaattctcttcgttc
atcacacagtactatggacttgttttggatttgttggtgctgggtctgcatcgttccagc
gaaatggctggaccaccgcaaatgcccaacgatttcctaacattccaggatgcagtcaca
gagacagcgcatcctattcgactttactgtcgctacgtggatcgcatacatttgttcttc
agattttcggctgaggaagcgcgcgaccttattcagcgttatctgaccgagcatccagat
ccgaataatgagaatatcgtgggctacaataacaaaaaatgctggccacgcgatgcgaga
atgcgtttgatgaagcacgatgttaatctgggtcgcgctgtgttttgggacatcaagaac
cgtttgcctcgctctgtgactaccattggctgggagagcactttcgtctcggtctattcc
aaggacaatcccaatctgttattcaacatgagcggcttcgagtgtcgcattctgcccaag
tgtcgcacgcaaaatgaggagtttacgcatcgtgatggcgtttggaatttgcagaatgag
ataacaaaggagcgcacggctcagtgtttcctgcgcgtcgatgatgagtcgctgggacgt
ttccataatcgtgtgcggcaaattttaatggcctccggctccaccacattcacaaagatt
gtcaacaaatggaacacggctttaattggtctgatgacctatttccgcgaggctgttgtg
aatacgcaggagctcctcgatttgctggttaagtgtgaaaataagattcagacgcgtatt
aagattggcttgaattccaaaatgccctcgcgtttcccgcccgtggtgttctatacgccc
aaagagctgggcggcttgggcatgttgagcatgggccacgtgctgataccgcaatccgat
ctgcgctggtccaagcagaccgacgtgggcattacgcatttccgctccggcatgtcgcat
gacgaggatcagcttataccaaatctgtatcgttatatacagccatgggagagtgaattc
attgactcgcagcgtgtttgggcagagtatgcgctaaagagacaggaagcaaatgcacag
aatcgtcgcctgacactggaggatctggaggatagctgggatcgtggtataccgcgtatc
aatacgctcttccagaaggatcgtcacacgctggcttacgacaagggctggcgcattcgc
actgagttcaaacagtatcaggtgctcaagcagaatcccttctggtggacacatcagcga
cacgatggcaaattgtggaatctgaacaactatcgcacagacatgatccaagcgctgggc
ggtgtggaaggcatcctggagcatacactgttcaagggcacctacttcccaacgtgggag
ggtctgttctgggagaaggcatccggctttgaggagtccatgaagtacaagaagctgaca
aatgctcagcgctctggtctcaatcagatacccaatcgtcgcttcacgctctggtggtca
ccgactatcaatcgtgccaacgtttacgtcggtttccaggtgcagctggatctaacgggc
attttcatgcacggcaaaattcccacactgaaaatctcgctgattcaaatcttccgtgct
cacttgtggcagaagatacacgaatcgattgtcatggatttgtgtcaggtgttcgatcag
gagctggatgcccttgagattgagacggtgcaaaaggagacgatacatccgcgtaaatca
tataaaatgaattcctcgtgtgccgatatactgctgttccctgcctacaaatggaacgtg
tcgcgaccttcgctgctagcagacaccaaggacaccatggacaatacaacgacacagaaa
tattggctggatatacagctgcgttggggtgattacgattcgcacgacgtggagcgttat
gcaagggcaaagttcctggactacaccacggataacatgtccatttatccgtcgccgacg
ggcgtgctcattgccatcgatttggcttacaatttgcactcggcctacggcaattggttc
cccggctgcaagactctgatccaacaggccatggccaagatcatgaaggccaatccggcg
ctgtatgtgctgcgcgagcgtatacgcaaggccttgcaactgtactcatcggagcccacg
gaaccgtaccttagctcccagaattatggcgaactcttctcgaatcaaatcatttggttt
gtggacgatacgaatgtctatcgcgtcaccatccacaagacctttgagggtaatttgacc
acgaagcccatcaacggcgccatcttcatcttcaatccacgtactggacagctgttcttg
aagatcatccacacgtccgtgtgggcgggtcagaagcgtttgggccagctggccaagtgg
aagacggccgaggaagtggctgccctgattcgttcgctgcccgttgaggagcagccgaag
cagattattgtcacacgcaaaggcatgttggatccgcttgaggtgcatttacttgacttc
cccaacattgtcatcaagggctcggagttgcagctgcccttccaggcctgcctcaaggtg
gagaagtttggcgacttgattctgaaagccaccgagccgcaaatggtgttgttcaatctg
tacgatgactggctaaagacgatatcctcatatacggcattcagtcgtttgatattgata
ctgcgtgccctgcacgtgaatacggagcgaacgaagatcatactgaagccggataagaca
accataacggaggcgcatcacatttggcccacgctaacggacgaggaatggatcaaggtg
gaggtgcagctgaaggatctcattctggccgattacggcaagaagaacaacgtgaacgtt
gcctcgctgacacagtccgagatccgtgacatcattctgggcatggagatcagcgcaccg
tccgcacagcgtcaacagattgccgagatcgagaaacagacgaaggaacagaatcagttg
acggccaccacgacgcgcacaacgaacaagcacggagatgagattatcacgtcaaccacc
tcgaactatgagacgcaaacgtttagctcgaagaccgaatggcgcgtgcgtgcgatatcc
gcaacgaatctgcacttgcgtacgaatcacatctatgtcagctccgacgatatcaaggaa
acgggctatacgtatattttgccaaagaatatactgaagaagttcgtcacgatatccgat
ttgcgtgcacagatcgctggctatttgtacggtgtgagtccgccggataatccgcaggtg
aaggagatacgctgcattgtgatgccgccacagtggggcacacatcagacaatcaatctg
cccaatgccctgcccacgcatcagtatctgaaggatatggagccacttggctggattcac
acgcaaccgaatgaactgccgcagctgtcgccgcaggacatcaccacccatgccaagatc
atgcaggagaactccaattgggatggcgagaagacaatcgtcattacctgctccttcacg
cccggctcctgctccctgacggcctacaaactgacgccgtccggcttcgaatggggctcc
aagaatacggacaagggcaataatcccaagggatatctgccatcgcactatgaacgcgtt
caaatgctgctgtccaacaagttcctcggattcttcatggtgccggcgcagggcagttgg
aactacaatttcatgggcgtgcgacacgatccgaatatgaaatacgaactgcaattggcc
aatccgaaggagttctatcacgaactgcaccgcacatcgcatttcctgctcttctccaat
ctggaggatggcggcgatggcgccggcgctgatcgtgaggatgtctatgcctaa
DBGET
integrated database retrieval system
