Drosophila navojoa: 108654777
Help
Entry
108654777 CDS
T05898
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dnv
Drosophila navojoa
Pathway
dnv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108654777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnv03041
]
108654777
03009 Ribosome biogenesis [BR:
dnv03009
]
108654777
Enzymes [BR:
dnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108654777
Spliceosome [BR:
dnv03041
]
Complex A
U2 snRNP components
U2 related factors
108654777
Complex B
108654777
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108654777
Ribosome biogenesis [BR:
dnv03009
]
Eukaryotic type
90S particles
Helicases
108654777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Flavi_DEAD
ResIII
ATPase
ABC_tran
AAA_30
T2SSE
AAA_25
TsaE
AAA_7
PhoH
AAA_24
Motif
Other DBs
NCBI-GeneID:
108654777
NCBI-ProteinID:
XP_017961803
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MSKRRIEVGETYTTKLKKESEASTSSAAASSTGTVAQVTGGFVPSKQPPTMNPFTMKPYS
ARYQNLYKKRITLPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVEFAVSKGRK
GVACTQPRRVAAMSVAQRVSEEMDVNLGDEVGYSIRFEDCSSPKTLLKYMTDGMLLREAM
SDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFDN
APLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHICEEIEGDILMFLTGQEEIEEAC
KRIKREIDNLGSEIGELKCIPLYSTLPPNQQQRIFEPPPPPNASGAIGRKVVVSTNIAET
SLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYT
EKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYL
AALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEA
KKVADEAKMRFAHIDGDHLTLLNVFHAFKQSNEDPNWCYENFINYRSLKNADNVRQQLAR
IMDRFNLKRTSTEFSSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPSTC
LDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLLSLAPQYYDLNNFPQCEAKRQLELLQQR
METKQYQKGF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgacgtattgaagtaggcgagacatacaccaccaagctcaagaaggagtcg
gaagcttcaacttcttctgcagcggcgtcatccaccggcactgttgcccaagtcacgggt
ggatttgtgcccagtaagcaaccacccactatgaatccgttcacaatgaagccttactcc
gcacgctaccaaaacttgtacaagaagcgaatcacattgccggtattcgaatatcaggcg
gactttatgcgcttgcttagccagcatcagtgtattgtgttggtgggtgagacgggctct
ggcaaaacgacacaaataccgcaatggtgtgtggagttcgctgtgtccaaaggacgcaaa
ggcgtcgcctgtacacagccgcgtcgtgtggccgccatgtcggtggcccagcgtgtctct
gaggaaatggacgttaatcttggcgatgaagtcggctattccattcgattcgaggattgc
tcttcgcccaaaaccctgctcaagtatatgacggacggtatgctgctgcgcgaagccatg
tcggatccgatgctggatcaatatcaagtcatattgcttgacgaggcgcacgagcgcaca
ctggccactgatatactgatgggcgtgctaaaagaggttattcgacagcgcaatgatctc
aaattggtggtcatgtcggccacactcgatgcaggcaaattccagcaatactttgacaat
gcgccgttgatgaacgtccccggtcgtacgcatcccgtcgagattttctatacaccagag
cccgagagagactatttggaggcagctattcgcacagttatacaaatacatatatgcgag
gaaattgaaggcgatattcttatgtttcttacgggccaggaagagatcgaagaggcttgc
aagcgtatcaagcgagagattgacaatttgggctccgaaattggcgagctgaagtgcatt
cccctttactcgactctgccgcccaatcaacaacagcgcatctttgagccgccaccgcca
ccaaatgcctcaggtgctattggccgcaaagtggtcgtatccacaaacattgccgaaacc
tcgctgaccattgatggcgtggtttttgtgatcgatccgggctttgccaagcaaaaggta
tacaatccgcgcatacgtgtcgagagtttgctcgtctcccccatatcgaaggcctcggca
cagcagcgtgccggccgtgctggtcgaacacggccaggcaaatgctttagactatataca
gagaaggcgttcaagaacgaaatgcaagataacacctacccggagatattgcgctcaaat
ttgggcactgtggtgctgcagcttaagaaattgggcattgatgacctggtgcactttgat
ttcatggacccgccggcgcccgagactctgatgcgcgccttggagctgctcaactatttg
gccgccctggacgacgacggcaatctaacggatcttggcgctgtgatgtccgagtttccg
ctcgatccacaattggccaagatgctaatagccagttgccagcacaattgctccaatgag
atactttcaattacggccatgctgtcggtgccacaatgtttcgtgcgacccaatgaggca
aagaaggtggctgacgaggccaagatgcgtttcgctcacatcgacggagatcatctaacg
ctgctgaatgtctttcacgccttcaagcagagcaatgaggacccgaactggtgctatgag
aacttcatcaattatcgctcgctcaagaacgccgacaatgtgcgccagcagctggcacgc
atcatggatcgcttcaatttgaagcgcaccagcacagagttcagctcgaaggactattat
gtcaatatacgcaaggctctagtccagggcttctttatgcaggtcgcgcatctggagcgt
acgggacactatctgaccatcaaggacaaccagaacgtgcagctgcatccgtcaacttgc
ctggaccacaaacccgactgggtcatctacaacgaatttgtgctgaccaccaaaaactac
atacgcaccgtgacagatgtgaagcctgaatggctgctcagtctggcgccgcagtactac
gatctgaacaactttccacaatgcgaggccaagcggcagttggagctgctccagcagcgc
atggagacgaagcagtaccagaagggcttctga
DBGET
integrated database retrieval system