Drosophila navojoa: 108655339
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Entry
108655339 CDS
T05898
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dnv
Drosophila navojoa
Pathway
dnv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108655339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108655339
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108655339
U7-dependent histone pre-mRNA processing factors
108655339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
PglZ_C
Motif
Other DBs
NCBI-GeneID:
108655339
NCBI-ProteinID:
XP_017962526
UniProt:
A0A484BWV5
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLL
SHPDVYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMYDFDLFSLDDVD
TAFEKITQLKYNQTVSLKGKGYGISITPLSAGHMIGGTVWKIVKVGEEDIIYAVDFNHKK
ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN
NPFQFKHINLCHTLADIYKLPAGPKVVLASTPDMESGFTRDLFVQWAGNPNNSIIFTTRT
GPGSLSMDLVENYSPGRQIELDLRRRVELEGAELEEYLRTQGEKLNPLIVKPEVEEESSS
ESEDDIEMSVITGKHDIVVRSEGRHHSGFFKSNKRHHVMFPYHEEKIKYDDYGEVINLDD
YRIVDSSYDYAPTDDQNKENIKKEEPHVEPQSNGNLNNDVQLLEKPTKLISQRKTIEVNA
QIQRIDFEGRSDGESMLKILSQLRPRRVIVVHGTAEGTQIVAKHCEQNVGARVFTPQKGE
IIDVTTEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRLQAIDAPTQSEVTVEQD
VAALEGKTLTLEMLEEDEIPVHNSVLINELKLSDFKQVLMRNNINSEFSGGVLWCCNGTL
ALRRVDVGKVAMEGCLSEDYYKIRELLYEQYAIV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattattaagctgcacaccatatcgggtgccatggatgaatcgccgccctgc
tacattctacaaatagacgatgtacgaatattgctcgactgcggttgggacgaaaaattt
gatccgaattttataaaggaattaaaaaggcaagtgcatacactggacgctgtactgctc
tcccatccggatgtgtatcacctgggcgcactgccatatcttgttggcaagttgggcctt
aactgtcccatttatgcgacgattcctgtcttcaaaatggggcagatgttcatgtatgac
ttgtatatgtcgcatttcaatatgtacgacttcgatctgttttcattggacgatgtggac
acagccttcgaaaagatcacacaactgaagtacaaccaaacggtctcactgaaaggcaag
ggctatggcatttctataacaccgctcagcgcaggacacatgattggaggaacggtttgg
aagatagttaaagttggcgaggaggatatcatctatgccgttgatttcaatcacaagaaa
gagcggcatctctctgggtgtgagctagacagactgcaaaggccatcgctactcattacc
gatgcatacaacgcacaataccaacaggcgagacgccgagcacgcgatgagaaattgatg
accaacattttgcagacagtacgcaataatggaaatgtactcattgctgtggacactgcg
ggtcgtgtgctagaactcgcacacatgctggaccaactgtggaagaataaggagtccgga
ttaatggcatattccttagcactgctcaacaatgtgagctacaacgtcattgaattcgcc
aagtcgcaaattgaatggatgagcgataagctgacgaaagcttttgagggcgcgcgcaac
aatccgtttcagttcaagcacatcaatctgtgtcacactctagccgacatctataagctg
cccgcgggtcccaaagtggtgctggccagcacacccgatatggagagtgggttcacccgc
gacctattcgtgcaatgggccggcaatccaaacaatagcattattttcacaacacgaacc
ggtcccggatcactcagcatggatttagtggaaaattattcgcctggccgacagattgaa
ctggacttgcggcgtcgcgttgagcttgagggcgctgaactggaggaatatctgcgaacg
cagggcgaaaagctcaatccacttattgtaaagccagaagtagaggaggaaagcagctca
gagtctgaggatgacattgaaatgagcgtgattacaggcaaacatgacattgtggtgcgg
tccgaagggcgtcatcattccggtttcttcaagtccaacaaacgtcatcatgtgatgttt
ccttaccacgaagagaagatcaagtacgacgattatggagaagtcattaatttggatgac
tatcgcatcgtagactctagctatgactatgcgcccacagacgatcaaaacaaggagaat
atcaaaaaggaggagccacacgtcgaaccgcagtccaatggcaatctaaacaacgatgtt
caattgcttgagaagcccactaaattgatcagtcaacgcaaaaccatcgaggtcaatgct
caaatacagcgcattgattttgagggacgatcggatggcgaatctatgctcaagattctc
tcacagttgcgcccacgacgcgttattgtggtgcatggcacagcggagggcactcaaata
gtggccaagcactgtgagcaaaatgtgggtgcccgcgtctttactccccagaagggagaa
ataatcgacgtaacaacggagattcacatatatcaggtgcgcctaacagaaggtctcgtc
tcccagctacagttccagaagggcaaagatgctgaggtggcctgggttgatgggcgactc
ggtatgcgcctacaggccatcgacgcaccaactcaatcggaagtcaccgtggagcaagat
gtggcggcgctagagggcaaaacgctaacgttagagatgctcgaagaagacgaaattccc
gttcacaattcggtgttgatcaacgaactgaaactgtcggacttcaagcaggtgctaatg
cgcaacaacatcaactcggaattctccggtggcgtcctctggtgctgcaatggcacgctg
gcgctgcggcgtgtcgacgttggcaaagtggccatggagggctgcctctccgaggattac
tacaagatacgtgaactactttatgaacagtacgccattgtgtag
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