KEGG   Drosophila navojoa: 108655608
Entry
108655608         CDS       T05898                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
dnv  Drosophila navojoa
Pathway
dnv03420  Nucleotide excision repair
dnv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:dnv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    108655608
   03460 Fanconi anemia pathway
    108655608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dnv03032]
    108655608
   03400 DNA repair and recombination proteins [BR:dnv03400]
    108655608
DNA replication proteins [BR:dnv03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    108655608
DNA repair and recombination proteins [BR:dnv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     108655608
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 108655608
NCBI-ProteinID: XP_030244668
LinkDB
Position
Unknown
AA seq 969 aa
MSDATEAQTSETDEQPAAAPLPESNETLEDEELANLVTAEEYLMRKDVQLLEYEKQMFLD
LVHADGLLVAAKGLSYERVLLHILKVYSDAGNLLLVINSSDWEEQYYKSKLDAKYVHEVA
NTATERERVYLEGGIQFISTRILVVDLLKQRIPIELITGIIVLRAHSIIESCQEAFALRL
YRQRNKTGFIKAFSSSPEAFTIGYSHIERTMRNLFVKQLYIWPRFHATVRAALHPWQAQT
IELHVPLSERVSSIQTHILDIMNFLVREIKRINRTVDMEAVTVENCVTKKFHKILQAQLD
CIWHQLNSQTKLIVADLKILRSLMISTMYHDAVSSYALIKRYRSTEYAISNSGWTLMDAA
EQIFVLSKQRVYNGQNEFEPEPCPKWQALSELLTQDIPGDMSRRRGAGHLDPPKVLILCQ
DARACYQLKQYLTQGSARYLLQQALRHEVLVGKLSDEFAKQSQGAAMAEPAAKADGVKLE
PNTAAAAPPAAAPPALDELSQLLSETDAEAQLQQQLFEESYMLTMTQAAPSDPDPNASIF
EIIPELEQFDVSAALAAHRQPCICLQTFKTEREGSMALEHMLEQLQPHYVIMYNTNVTAI
RQLEVFEARRRLPPDDRMKIYFLIHARTVEEQSYLTSLRREKSAFELIIETKSKMVIPEY
QDGKTDEAFVLYKSYEDEEPTNAQTRQGAATGVALASARITPKIIVDMREFRSDLPCLIH
RRGLEVVPVTITIGDYILTPEMCVERKSISDLIGSLNSGRLYNQCVQMQRYYAKPILLIE
FDQNRPFHLQGKFMLSQQTTATNADIMQKLQLLTLHFPRLRLIWSPSPYATAQLFEELKL
GKEQPDAQVAAALGSDEAGPAPGEQLQYNNAIHDFLLRLPGVHTRNVHGLMRKGGSLRQL
LQLSQTELAELLQSQESGKLLWDILHVAHLPEKDEVAGSSALLAASKQFGSGSHNRFRKA
ASEARRGRR
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgtcggacgcaaccgaagctcagacaagcgaaacagatgaacagccagcggccgctccg
ttgcccgagtccaacgagaccctggaggacgaggaactggccaatctggtcacggccgag
gaatatctgatgcgcaaagatgtccagctgctggagtatgaaaagcaaatgtttctcgac
ctggtgcacgccgacggcctgctcgtggcagccaaaggtctgagctatgagcgcgtgctg
ctgcacatcctgaaggtctacagcgacgcgggcaatctgctgctggtgatcaacagctcc
gactgggaggagcagtactacaagtccaagctggatgccaaatatgtgcacgaggtggcc
aatacggctaccgagcgcgaacgcgtctacctggagggcggcattcagttcatatccacg
cgaatcctggtggttgatctgctcaagcagcgcatacccattgagctgatcacgggcatc
atcgtgctgcgcgcccacagcatcatcgagagctgccaggaggcgttcgccctgcgactc
tatcgccagcgcaacaagaccggcttcatcaaggccttctcgagcagcccggaggccttc
accattggctactcccacatcgagcgcaccatgcgcaatctgttcgtgaagcaactgtac
atctggccgcgattccatgccacggtgcgtgccgcactgcatccgtggcaggcgcagacc
atcgagctgcacgtgccgctcagcgagcgggtgagctccatccagacccacatactggac
attatgaacttcctggtgcgcgaaatcaagcgcatcaatcgcaccgtcgacatggaagcg
gtcaccgtggagaattgtgtcaccaagaagttccacaagattctgcaagcccaattggac
tgcatttggcatcagctcaactcgcaaacaaaactcatcgtggccgatctcaaaatactg
cgcagtcttatgatatccacgatgtaccacgatgccgtcagctcgtacgccctgatcaaa
cgctaccgcagcacagagtacgccattagcaactcgggctggacgctcatggatgccgcc
gagcagatattcgtgctctccaagcagcgcgtctacaatggccaaaatgaatttgagccg
gagccgtgccccaagtggcaggcgctgagcgagctgctcacgcaggacatacccggcgac
atgagtcggcggcgaggcgccggccacctggacccgcccaaggtgctgatactctgccag
gacgcgcgcgcctgctaccagctgaagcagtacctgacccagggcagcgctcgctacctg
ctgcagcaggcgctgcggcacgaggtgctcgttggcaagctgagcgacgagtttgccaag
cagagtcagggcgccgccatggcagagccggcagccaaggcggacggcgtcaagctggag
ccgaacactgcggctgctgctcctccggcggcagctccgccggcgctcgacgagctctct
cagctgctgagcgagacggatgcggaggcgcagctgcagcagcagctgttcgaggagagc
tacatgctcaccatgacccaggccgcgcccagcgatcccgatccgaatgcctcgatcttc
gagatcatacccgaactggagcagttcgacgtgtcggcggcactggccgcccatcgacag
ccctgcatttgcctgcagaccttcaagacggagcgcgagggctccatggccctggagcac
atgctggagcaactgcagccgcactacgtgatcatgtacaacacgaatgtgacggccata
cggcagctggaggtcttcgaggcgcgtcgtcgcctgccgcccgacgaccgcatgaagatc
tacttcctgatccatgcgcgcaccgtcgaggagcaatcctatttgaccagtttgcggcgt
gaaaagtccgccttcgagctgatcatcgaaacgaagagtaaaatggtcatacccgagtat
caggatggcaagacggacgaggcctttgtgctctacaagagctacgaggacgaggagccg
acgaacgcgcagacgcgtcagggggccgccacgggcgtggcattggccagtgcacggatc
acgcccaagatcatcgtggacatgcgcgagtttcggtccgatctgccgtgcctgatccac
cggcgcggcctggaggtggtgccggtgaccatcaccatcggcgactacattctgacgccg
gagatgtgcgtggagcgcaagtcgatctcggatctgatcgggtcactcaactcgggccgg
ctctacaaccagtgcgtccagatgcagcgctactacgccaagcccatactgctcatcgag
ttcgaccagaaccggccgttccacttgcagggcaagttcatgctctcccagcagacgacg
gccacgaatgcggatatcatgcagaagctgcagctgctcaccctgcacttcccccggctg
cggctcatctggtcccccagcccgtatgcgacggcccagctgttcgaggaactgaaactg
ggcaaggagcagccggatgcccaggtggccgccgccctgggcagcgacgaggccggccca
gccccgggcgagcagctgcagtacaacaacgccatccacgatttcctgctgcgcctgccg
ggcgtccacacgcgcaatgtccatggcctgatgcgaaagggcggcagcctgcgccagctg
ctgcagctcagccagacggagctggccgagctgctgcagtcgcaggagagcggcaagctg
ctctgggacatactgcatgtggcgcatctgcccgagaaggacgaggtcgccggctcctcg
gcgctgctggcggcgagcaaacaatttggcagcgggtcacacaatcgcttccgcaaggca
gccagcgaggcgcgacgaggcaggcgttga

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