Drosophila navojoa: 108655768
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Entry
108655768 CDS
T05898
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
dnv
Drosophila navojoa
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnv03021
]
108655768
03036 Chromosome and associated proteins [BR:
dnv03036
]
108655768
Transcription machinery [BR:
dnv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108655768
Chromosome and associated proteins [BR:
dnv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
108655768
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Tex_central_region
Spt6_S1
HHH_3
HHH_9
SH2
Tex_YqgF
OB_RRP5_4th
Tex_N
Motif
Other DBs
NCBI-GeneID:
108655768
NCBI-ProteinID:
XP_017963038
UniProt:
A0A484B726
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
MAEFLDSEAAESEDEEELDVHERKKLKKLKAAVSDSSEEEEDDEERLREELKDLIDDNPI
EEDDGSENDSDTGSGGDEDGGSGKKRKKHEDDDLDDRLEDDDYDLIEENLGVKVERRKRF
KRLRRIHDNESDGEEQHVDEGLAREQIAEQLFDENDDQSIERRSERSIREADAFDDEESE
SDADDFIVDDNGRPIAEKKKKRRPIFTDASLQEGQDIFGVDFDYDDFYKPEEDEYEEESE
GDEYDEDLLGDDFRAAKKKKSPKKKAIKKTIFDIYEPSELKRGHFTDLDNQIRRTDIPER
MQLRQVPVTPVPEGSHELDDEADWIYRFAFCKQTVSEQEKADNREKMRKPPTAVNKIKQT
LEFIRNQQLEVPFIAFYRKEYVKPELNIDDLWKVYYYDERWCQLNDRKRKLKQLFEKMRQ
FQLETLCDDPDKPLPDDVRLMLDSDFERLNDVQSMEELKDVHMYFLLNYSHELPKMQAEL
RRKQLQERREARARKQASAAAAAAGSDGESGVDLTDKLDTAELDEAEELELAAEEQLKQA
PNSSPYAVFRKAGICGFAKHFGLTPEQFAENLRDNYQRNEVNQESLSPTEMAKQYLSPRF
MTVDEVLHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRPTKNGMVLIDENSPVYSMK
YVAKKPVGDLFGDQFIKLLMAEEEKLLEITFLDEFEGNANANGPPGDYITEATQFYHLDQ
FSKNVLEWNALRAECVQLALKKWVIPDLIKELRATLHEEAQQFVLRSCIAKLYKWLKVAP
YKPEMPQHHNFEEWSTLRGIRSMGLAYDPDQSVAAFCAIASPEGDITDYLRLPSILKRKN
SYNAEDKALKLADLRKLSEFIKMKKPHVVVIGAESRDAQMIQADIREILKDLEANEQFPP
IEVEIIDNELAKIYANSKKGESDFKEYPPLLKQAASLARKMQDPLVEYSQLCDADDEILC
LRYHPLQERVPRELLLEQLSLEFINRTSEVGLDINLMVQNSRTVNLLQYICGLGPRKGQA
LLKLLKQSNQRLENRTQLVTVCHLGPKVFINCSGFIKIDTSSLGDSTEAYVEVLDGSRVH
PETYEWARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSI
TLYDIRNELSCLYKDYRSPYQKPSAEELFDMLTKETPDSFYVGKCVTAMVTGFTYRRPQG
DQLDNANPVRIDDSDSWQCPFCHKDDFPELSDVWNHFDDNNCPGQASGVRVRLENGLPGF
IHIKNLSDKQVRNPEERVRISQTIHVRIIKIDIDRFSVDCSSKSADLKDVNNEWRPRRDA
FYDYVTEELDNRKVSDAKAKAMKRKTYARRVIAHPSFFNKSYAEVIAMLAEADQGEVALR
PSSKSKDHLTATWKVADDIFQHIDVREEGKENDYSLGRSLWIGTEEFEDLDEIIARHINP
MALAARELIQYKYYKPNKAPANVNERDFMEQLLREEKGRDPKKIHYFFTASKSMPGKFLL
SYLPKTKVRHEYVTVMPEGYRFRGQIFDSVNSLLRWFKEHWLDPPTVMSSSISATPASNT
PTNAHNMMRPPPTSALSSLGNSGSGGGAQGFSSSGSMTGGTPRSGISSSDMRSSSAYSIT
HSMGAPGGGGAGGIGGYGSGSGSSSSLGLINTAGLGHFGSGTPTFGAHINTPYTPSGQTP
FMTPYTPHATQTPRYGHNVPSPSSQSSSSQRHGHYGGTPRYYDNAYNSGNLSQHHQQQSQ
HSHSHGHGHGHSQQQHPHLSQQHHHHMHQQQRAKENLDWQLANDSWARRKPQHQQQSQQQ
QQQQLGLGMSLGMGYGSGSGVGGVGSGAGSTPTNEYHTSSSSTNRSSSSVAGVAAAAAVS
SSAASGGGISSKSSVRSTPRTNTSPHSMNLGDSTPLYDEN
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcttggattctgaagccgccgaatcagaggatgaggaagaattggatgtg
catgagcgaaaaaaacttaagaaactaaaagccgccgtctccgacagcagtgaagaagaa
gaagacgatgaggagcgtttgcgcgaagagcttaaggatctgattgatgacaatcccatt
gaggaggatgatggcagcgaaaatgattcggatactggcagcggaggtgacgaagatgga
ggcagcggtaagaagcgtaaaaagcatgaggatgatgatctggatgatcgcttggaggac
gacgattacgatctgattgaggagaatttgggcgttaaggttgagagacgtaaacgtttt
aaacgcctgcgacgcattcacgacaacgaaagcgatggcgaggagcagcacgtagacgaa
ggacttgcacgcgagcaaattgctgagcagctattcgatgagaatgatgatcagagcatt
gagaggcgcagcgagcgcagcattcgcgaggcggatgccttcgatgacgaggagagcgaa
tcggatgctgatgattttattgtggatgacaatgggcgtcccatagccgaaaagaaaaag
aagcgacgacccatatttacagatgcctccctgcaggagggccaagatatctttggcgtt
gattttgactacgatgatttttataagcccgaagaggatgagtatgaggaggaatcggag
ggcgatgaatatgatgaggatctgcttggagatgatttccgtgcggccaaaaagaagaaa
tcaccgaaaaagaaggcaatcaaaaagacgatatttgatatatatgagccaagcgaattg
aaacgtggccatttcactgatttggacaatcagatacgaagaaccgatataccagagcgg
atgcagttgcgtcaggtgccggtgacgccggtgccggagggatcccatgagctggacgac
gaggccgattggatatatcgttttgcgttctgcaaacagacggtctccgagcaggagaag
gcggacaatcgcgaaaagatgcgcaagccgccaacggctgtgaataaaatcaaacagact
ttggaattcatacgtaaccaacagttggaggtgccgttcatagcattctatcgcaaggag
tatgtgaaaccagagctgaacatcgatgatctgtggaaggtttactactacgatgagcgt
tggtgccagctaaacgatcgcaagcggaagctgaagcaactgttcgagaagatgcgacaa
tttcagctggaaacactttgtgatgatccagataagccgctgccggacgatgtgcgcctg
atgctcgacagcgatttcgagcgcctgaacgatgtgcagtccatggaggagctgaaggat
gtgcacatgtattttctgctcaactactcacatgagttgcccaaaatgcaggccgagctg
cgacgcaaacagctgcaggagcgacgcgaggcacgggcacgcaaacaggcatcagcagca
gctgccgccgcgggcagtgatggtgaatctggtgtggatctaaccgataaactggatacg
gccgagctcgatgaggctgaggaactcgagttggccgccgaggagcaattgaaacaggca
ccaaatagcagtccctatgctgtattccgcaaggccggcatctgtggctttgccaaacac
tttggcctaacgcccgagcaatttgccgagaatctacgggacaattaccagaggaacgaa
gtcaaccaggagagcctaagccccacagagatggccaagcagtatttgtcgccacgcttc
atgaccgtcgacgaggtgctgcatgccgccaaatatgtggtggccaggcagctggcccag
gagcccctgttgcgcaagacaatgcgtgaggtgtactttgatcgggcacgcatcaatata
cggcccaccaagaacggcatggtcctgatcgacgagaactcgccggtctattcgatgaaa
tatgtggccaagaaaccggtgggtgatctatttggggatcagttcatcaagctgctgatg
gccgaggaggagaagctgttggagattacgttcctcgatgaattcgagggtaatgcgaac
gcaaatggtccgcccggtgattacattacagaggccacacagttctaccatctggatcag
ttttccaagaatgtgctggagtggaatgccctgcgtgccgagtgcgttcagttggcactg
aagaaatgggtcataccggatctaatcaaggagctgcgcgcaacattgcacgaggaggcg
caacagtttgtgctgcgctcgtgcatagccaagctgtacaagtggctaaaggtggcacca
tataagccagagatgccgcaacatcacaatttcgaggagtggagcacactgaggggcata
cgatccatgggtctcgcctatgatccggatcaatcggtggccgccttctgtgccatagcc
agtccggagggcgatatcactgactacttgcgattgcccagcatcctcaagcgtaagaat
tcctacaatgccgaggacaaggctcttaagttggccgatttgcgtaaactcagcgaattc
atcaagatgaagaagccgcacgttgtggtcattggcgccgagtcgcgcgatgcacaaatg
atacaggcggacatacgcgagatactcaaagacttggaggccaacgaacagtttccgccc
atcgaggtggagatcattgacaatgaactggccaagatctatgccaattcgaagaagggc
gaaagtgactttaaggagtatccacccttgctgaagcaggctgcctcgctggcgcgcaaa
atgcaggatccattggttgagtactcccagctgtgcgatgccgacgatgagatactctgc
ctgcgctaccatccgctgcaggagcgtgtgccgcgtgagctactgctggagcagctcagc
ctggagttcatcaatcgcaccagcgaagtgggcttggacatcaatctgatggtgcagaac
tcccgtaccgtcaatctgcttcaatatatttgtggactgggtccgcggaagggccaggcg
ctgctgaagctgctcaagcagagcaaccaacgcctcgagaatcggacacaattggtgacg
gtgtgccacctgggtcccaaggtcttcatcaattgcagtggcttcatcaagatcgatacc
agttcgctgggcgacagcacggaggcgtatgtcgaggtgctggatggctcgcgtgtgcac
ccggagacatatgagtgggcgcgcaagatggccatcgatgccatggagtacgatgatgag
gaaacaaatccagccggtgcactcgaggagatcctcgaatcgccggagagactcaaggat
ctggacttggatgcattcgccgtggagctggaacgtcagggatttggcagcaaaagcatc
acgctctacgacatacgcaacgagctgagctgcctgtacaaggattatcgttcaccctat
caaaagcccagcgccgaggagctcttcgatatgctgaccaaggagacgccggactcattc
tatgtgggcaagtgtgtgacggccatggtgactggatttacgtatcggcgtccacagggc
gatcagctggacaatgccaatccggtgcgcatcgatgactccgacagctggcaatgtccg
ttctgtcacaaggatgacttcccggagctgtccgatgtgtggaatcatttcgatgataac
aattgcccgggccaggcgtccggcgtgcgtgtacggctcgagaatggcctgcccggtttc
atacacatcaagaatctgtccgacaaacaggtgcgcaatccggaggaacgtgtccgcatc
tcacagaccatccatgtgcgcatcattaagattgacattgatcgcttctcggtcgactgc
agctccaagtcggccgacctgaaggacgtgaacaacgaatggcgacccagacgtgatgcg
ttctatgattacgtcaccgaggagctggacaatcgcaaggtgtcggatgccaaggcgaag
gccatgaagcgcaagacctatgccagacgcgtcatagcccatccaagtttcttcaacaag
tcgtatgcggaggtcatcgccatgctcgccgaagcggaccagggcgaggtggcgctgcgg
cccagcagcaagtccaaggatcatttgacggccacgtggaaggtggccgacgacatcttc
cagcacatcgatgtgcgcgaggagggcaaagagaatgactatagtctgggacgcagtctc
tggatcggcaccgaagagttcgaggatctcgacgagatcatcgcacgtcacatcaatccc
atggctctggctgcccgcgagctcatccaatacaagtactataagccgaacaaggcgcca
gcgaacgtgaatgagcgtgacttcatggagcagctgttgcgcgaggagaaggggcgtgat
ccgaagaagatccattactttttcacggcatcgaagagcatgccgggcaagtttctgttg
tcctatctgcccaagacgaaggtgcgccacgaatatgtcactgtcatgccggagggctat
cggtttcgtggccaaatctttgactcggtcaacagtctgttgcgatggttcaaggagcac
tggctggatccgccaacggtcatgtccagttcgatcagtgccacgcccgccagcaatacg
cccacaaatgcgcacaacatgatgcgaccaccgcccacatcggcgctcagttcgcttggc
aacagtggcagcggtggcggagcccaaggattcagtagctcgggcagtatgacgggcggc
acaccacgcagcggcatcagtagcagcgatatgcgcagctccagcgcctactcaataacg
cattccatgggcgctcccggtggtggaggcgctggcggcattggcggctatggcagcggt
agcggcagcagctccagcctgggcctcatcaataccgctggcctgggccactttggcagc
ggcacgcccacctttggcgcccacatcaatacgccgtacacgccaagcggccaaacacca
ttcatgacgccctatacgccgcatgcgacgcaaacaccacgctacggccacaatgttcca
agccccagctcccagtcgagcagcagtcagcggcacggtcactatggcggcacgccccgc
tactatgacaacgcctacaacagcggcaatctgtcgcagcatcaccagcagcagtcacag
cattcgcattcgcatggccatggccatggacactcacagcagcaacatccacacttgtcg
cagcagcaccatcatcatatgcatcagcagcaacgtgccaaggagaatctggactggcag
ctggctaacgattcgtgggcacgtcgcaagccccagcatcagcaacagtcgcagcagcag
cagcagcagcagctcggcttgggcatgagcctgggtatgggctatggcagcggcagtggt
gttggcggtgtcggcagcggtgccggctccacgcccaccaacgaataccatacgagcagc
agcagcacgaatcgcagttcgtcttcagttgccggcgttgcagcagccgctgctgtttct
agtagtgctgctagtggtggcggcatctcttccaagtcttcggtgcgcagcacgccgcgc
acaaacacctcgccgcactccatgaacttgggcgattcaacgcctctatatgacgagaac
tag
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integrated database retrieval system
