Drosophila navojoa: 108656909
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Entry
108656909 CDS
T05898
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
dnv
Drosophila navojoa
Pathway
dnv03013
Nucleocytoplasmic transport
dnv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108656909
03015 mRNA surveillance pathway
108656909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108656909
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108656909
mRNA cycle factors
P-body specific factors
108656909
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
DUF7794
Motif
Other DBs
NCBI-GeneID:
108656909
NCBI-ProteinID:
XP_017964804
UniProt:
A0A484AX96
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MSANQTSEAPTVPTTSASVEAAAATTTPTTVSATVSEADIETSDSIETGGIVGVPDNDVE
GLAELKQFISELQEKIDAKRQLRQQNANFELPGDEYFARLDSSLKKNTAFVKKLKLFTST
QLDSLLRELSALNLSKYISEICAALTEAKLKMTDVPAVVTLASKLHCTYADFSPQFLEAW
QKALKTTEKISNPSKLRVDLRLFAELVSSGVIQMKPGLALLGMVLVQLIAMDKDDHSNFS
IILSFCRHCGEEYAGLVPQKMQQLALKYDIEIPKSDFLSADKQLNLRTMLKGYFKALCKH
VLAEQAALMNMTKNIRRTMECKGEISQEKREKCELMQASFDKLLASAQSLSELLGEPMPE
LTKESECCNPGTVIDNMLDSAAFGTLDPWGDEETRAFYTDLPDLRQFLPNFSAPKVDLET
LEEPSELTEEAIDANIDAELDMDDPPSATSDTALDKDQEEQQQPGAAAESGAVALPAATA
AVPPLPVDKKMGSALMELGRQQQQQQQQQQLTSQSQSQHLRQQFDVFLLNLFNCVNKELI
DSAAIEFLLNYNTKHQRKKLTRTIFGVQRTRLDILPYLSRFVAIVHMCNTDVAADLSDLL
RKEFKWHIRKKNQLNIESKLKIVRFIGELVKFGLFKKFDALGCLKMLLRDFIHHHIEMAC
AFVEVSGVYLYNCRDSRLLMNVFLDQMLRMKTATAMDSRHAAQIESVYYLVKPPESAKRE
LAPRPVMHEYIRHLIFEELCKQNVERCIKMLRRINWDDPDVHNYAIKCLSKAYLLRFPLI
RCLADLVSGLSSYQPRAVTIVIDNVFEDIRAGLEIHSPKMSQRRIAMAKYLGEMYNYKLV
ESSHILNTLYSIISLGVTLDQSVISPLDPPESLFRLKLACMLLDTCAPYFTSQATRKKLD
YFLVFFQRYYWHKKSHPVFSRSENTSDLFPILVDHTYRDCLASVRPKLKLYKSLEQAKEA
IDQLQEQLYPQLRACSNNNNAQDSTLDTINEISELDDGVTDDSGSSDDQRERQAAGGSEE
ADQGNWTEYEVEQMAPPPPPEKSKEDLEFEQMYEKMTSDSYQERLKEPPLKATHKDIPVP
MMARLQKKSYDQLNCNNAMQISKGNASAPTTPTNHGHNWDGGNHLTSAAAATSSNDVAAT
DATGGGGCSGKGSGAVPFVLMVRGNKGGKQQFKSFVAPSDSQLAINLKLQEQKTREEKER
VKRLTLNITERIEEEDYQESLLPLQQRNFTQSYYQKPNKNKFKHQKGAPDADLIFH
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaaccaaacaagcgaggcgcccacagtgccaacaacatcagcatcagtcgag
gcagcggcagcaacaaccacaccaacaacagtaagtgcaactgtaagcgaggcagatatc
gaaacatcagattccatagagactggaggaatcgttggagtcccagacaatgatgttgag
ggactggctgaactgaagcaattcattagcgaactgcaggagaagatagacgccaaacgt
cagctgcggcagcaaaacgccaacttcgagttacccggtgatgaatactttgcgcgcctt
gactcgagcctaaagaagaatacggcatttgtcaagaaattaaagctcttcacaagcaca
cagctggactcgctattgcgcgaactctcggccctaaatctaagcaaatatatatccgaa
atatgcgcggctctgacggaggccaagttgaagatgacagacgtgccagccgtagtaacg
ctggcctccaagctgcactgcacctatgctgactttagtccacagttccttgaggcgtgg
cagaaggctttgaagacaacagagaaaatcagcaatccaagtaaattgcgcgtggatctg
cgtctgttcgcagagctggtcagctcgggtgttatacagatgaagccgggcttggcgctg
cttgggatggtgctggtgcagctgatagccatggacaaggacgaccatagcaacttctca
ataatattgtcgttctgtcgccactgcggcgaggagtatgccggcctagtgccgcaaaag
atgcagcagctggctctcaaatacgacatcgagatacccaagtcggatttcctaagcgcc
gacaagcagctcaacttgcgcaccatgctcaagggctacttcaaggcgctctgcaagcat
gtgctggccgagcaggccgccctcatgaacatgaccaagaacataaggcgcaccatggaa
tgcaagggcgagatcagccaggagaaacgtgagaaatgcgagctgatgcaggcgagcttc
gataagctgcttgcctcagcacagtcgctctccgagctgttgggcgaaccgatgccggag
ctaactaaggagtcggagtgctgtaatccgggcactgtcatcgataatatgctggacagc
gccgcctttggtacgctcgacccgtggggcgatgaggagacgcgcgcgttttacaccgat
ttaccagacttgcgacagtttttgcccaacttttcggcacccaaagtggatctggaaaca
ctcgaagagcctagcgagctgaccgaggaggccatcgatgcaaatatcgatgctgagcta
gatatggatgatccgccatcagcgaccagcgatacggcgctcgacaaggatcaggaagag
caacagcagccaggcgctgctgctgagtcaggtgcagtagcacttccggctgccactgct
gctgtacctcctctgcccgttgataagaaaatgggcagtgcgctaatggaactgggacgt
caacaacaacagcagcagcagcagcagcagttaacgtcacaatcgcagagccaacatcta
cggcaacagttcgatgtatttctgctcaatctattcaattgcgtgaacaaggagcttatc
gactcggccgcaatcgaatttctgctcaactacaatacaaagcatcagcggaagaagcta
acgcgaaccatattcggtgtgcagcgcactcgactcgatatcttgccatatctgtcacga
ttcgtggccattgtgcacatgtgcaacacggatgtggcggcggatctgtccgatttgctg
cgcaaggaattcaagtggcacatccgcaagaagaatcagctgaacattgagtcgaagctg
aagatcgtacgcttcattggcgaactggtcaagttcggactgttcaagaagttcgatgcc
ctgggctgcctgaagatgctgctgcgtgactttatccatcatcacatcgagatggcgtgc
gcctttgtggaggtcagcggcgtctatctgtacaattgccgcgactcgcggctgctgatg
aacgtctttctcgatcagatgctgcgcatgaagacggcgacggcaatggattcgcgtcat
gcggcgcaaattgagagtgtttactatctggtcaagccgccggagtcggcgaagcgtgag
ctagccccacgtccggtaatgcacgagtatatacgccatttgatattcgaggagctgtgc
aagcagaatgtggagcgttgcattaagatgctgcgacgcatcaattgggacgatccggat
gtccataactatgccatcaagtgcctgagcaaagcgtatctgttgcgcttcccactcatc
cgttgcctggccgatctagtctccggactgagctcctaccagccgcgtgctgtcaccatt
gtcatcgacaatgtgttcgaggatatacgcgccggcctcgagatccattcgcccaagatg
tcgcagcgtcgcatcgccatggccaagtacttgggcgagatgtacaactataagctggtg
gagtcatcgcatatacttaacacgctctattcgataatatcgcttggtgtgacattggat
cagtctgtcatatcgccgctcgatccgccggagagtctgtttcggctgaagctcgcctgc
atgctgctcgacacttgtgctccctacttcaccagccaagcgacgcgcaagaaattggac
tactttttggtgttctttcagcgctattattggcacaagaagtcgcatccggtgttcagc
aggtccgaaaatacttccgatctgtttcccatacttgtcgatcacacctatcgcgactgt
ttggccagtgtgcggccgaagctgaagctgtacaagagtctggagcaggccaaagaggcc
atagatcagctgcaggagcagctgtatccacagctaagagcctgcagcaacaacaataat
gcgcaggattccaccttggatacgatcaatgaaatcagcgagctcgacgatggcgtcacg
gatgactcgggctcatcggatgatcagcgggaacgtcaagcggccggcggctcggaggag
gcagatcaaggcaactggactgaatatgaggtggagcaaatggcgccaccgccaccgccg
gagaaatccaaggaggatctggaattcgagcaaatgtatgagaagatgaccagcgactcg
tatcaggagcgactcaaggagccgccactcaaagccacccacaaggatataccggtgccc
atgatggcgcgcctgcaaaagaagtcctacgaccagctaaactgcaacaatgcaatgcag
atctcaaagggcaatgcttctgcccccaccactcccacaaatcatggccacaattgggat
ggtggcaaccatttaacgtcagcagcagctgccacctcctcgaatgatgtcgccgccacg
gacgctactggcggtggcggttgcagtggcaagggcagcggtgcagtgccgtttgtgctg
atggtgcgcggcaataagggaggcaaacagcagttcaagtcatttgtggccccatcggac
tcccagttggccatcaatctgaagctgcaggagcagaagacgcgcgaggagaaggagcgc
gtcaaacgactgaccctgaacataacagagcgcatcgaggaggaggactatcaggagtcg
ctgctgccgctgcaacagcgcaactttacgcagagctactaccagaagcccaacaagaac
aagttcaagcaccagaagggtgcacccgatgcggatttgatcttccactaa
DBGET
integrated database retrieval system
