Drosophila navojoa: 108657903
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Entry
108657903 CDS
T05898
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
dnv
Drosophila navojoa
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dnv03000
]
108657903
Transcription factors [BR:
dnv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108657903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF3077
Motif
Other DBs
NCBI-GeneID:
108657903
NCBI-ProteinID:
XP_030246292
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MTDIESNIQQQQQQQQLQNVQRMQQESCLQELHQQLSAKYGAGGFTVQHQQQHHQHHFHT
VASLPSNLMPFLPFLRPPVPIMPDQVASIQSHYSLSPSHSHSHSRTHASAHKLTMQSIWP
TAAVAAAHIQAALAVAAFQGRIWSANTGSVSEPNTNLSIGIETGRVEGPSARVARTSRDS
LNSCGTSSERSAALDPEYQAHSHSHGQLSGQSQRHNHGHSKPHIKRPMNAFMVWAKDERR
KILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRT
CIVDGKKMRISEYKVLMRNRRAEMRQLWCRGGGPGGPIGSSSNGHSQDGGSAVQAAAAVA
AAAYHLQEMSQAIVDDCETPPPPTQLLDSGPIASSSSNYYYPPESLSPSGFSSEDMEISS
LRDDD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgactgacattgaatcgaatatacaacaacagcagcagcaacagcagttgcagaacgtg
caacggatgcaacaggagagctgcctgcaggagttacatcagcagctgagtgccaaatac
ggcgcaggaggattcactgtgcagcatcaacagcagcatcatcagcatcactttcataca
gtggcttcacttcccagcaatttaatgccatttttgccattcctgcgtccacctgtgccc
ataatgcctgatcaagtggcgtcaatccaatcgcattacagcctcagtcccagtcactcg
cattcgcacagccgcactcatgcaagtgcccacaaactgacaatgcaatcaatatggcca
acagcagcagtcgcagccgctcatattcaagcggcactggctgtcgccgcttttcagggc
cgcatctggagtgcaaacactggcagtgtctccgagccaaacacaaatttatcgataggc
atcgagacgggcagggttgaagggccgagtgctcgagtcgcccggacaagtcgggattcc
ttaaatagctgtggcaccagctcagaacgatcggctgcattggacccggagtaccaagct
cattcccatagccatgggcaattgagtggacagtcgcagcgacataatcatggacatagt
aagccacatattaagaggccaatgaatgcgtttatggtctgggccaaggatgagaggcgt
aaaatattgaaagcttgtccagacatgcacaattcgaatatttcaaaaattttgggcgct
cgctggaaagcgatgtcgaacgctgacaagcagccctactacgaggagcaatcacgtcta
tccaagctgcacatggaacaacatcccgactatcgctatcgtccacgtcctaaacgcact
tgcattgtcgatggcaaaaagatgcgcatatctgaatataaagttctgatgcgcaaccga
cgtgcggaaatgcgacaactttggtgtagaggtggcggaccaggtggtccaataggttcc
agctctaatggtcatagccaggatggcggctccgccgtgcaagcagcagcagcagtagct
gctgccgcctaccacctgcaggagatgagtcaagcaattgtcgacgattgtgaaacgcca
ccgccgccaactcagctattggattctggacccatagcgagcagcagtagcaattattat
tatccaccagaaagcttatcgccatcgggattctcttccgaggacatggaaatctcatca
ttgcgtgatgacgactaa
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