Drosophila navojoa: 108658455
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Entry
108658455 CDS
T05898
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dnv
Drosophila navojoa
Pathway
dnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108658455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108658455
03012 Translation factors [BR:
dnv03012
]
108658455
Enzymes [BR:
dnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108658455
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108658455
Translation factors [BR:
dnv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108658455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
ATPase
AAA_19
Red1
Rad17
ABC_tran
NB-ARC
Motif
Other DBs
NCBI-GeneID:
108658455
NCBI-ProteinID:
XP_030243736
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MHRGSKSNGRLGKNSSRPPGLKGRDIGMYYRNLARQRQNSDTKNEPKINLSCDVSVPPGV
IARVNEYIDQFKAARKAGHKHLDEDFQQQFHHMLSMNFAAFIEETKKQNQDLNLQNRSLD
AHLVDKQKELLQNADFRARYEDRMKLPAMVHAAEIIDAVDKNQVLLIVGSTGCGKTTQVP
QFLLDDCVAKGIGSCCRIVCTQPRRISAITVAERVSYERVEPIGHSVGYQIRLESRKPRE
RASITYCTTGVLLQQLQSDPLLHSVSILLLDEIHERSIETDLLMALLKIILPHRPTLKVI
LMSATVREEDFCNYFNRCPMFRIEGVMHPVEVFYLEDILAMTGYQFDCRNSNRCRPRLDQ
SDHRIMIEPYIRQVRDRYDSKVLEQLRVPHSEGCEDIEFIASLIYYICNNKSDGAILVFV
PGFNKISQLHNTLKNPRSPLGQRWRNQLLIFPLHSMLPSVEQQSVFRPAPKGKRKVIIST
IIAETSVTIDDVVYVINTGRTKVTDYDIETNIQSLEECWVTHANTQQRKGRAGRVQPGVC
YNLFSRAREALMSEVPTPEILRCKLEAIILSLKVLHIDDPYALFQTMIDPPAQRTVSIAI
NLLKRIEALDIDGKLTPLGMHLAKLPIDPQVGKMIVISALFRCVDPITSVAAALSYKNPF
YTPLGQELRVDQAKRRMAQGMHSDHLMIHNTICNYRESVENHRDRDFCYNNFLSHMTLQQ
LERMKSQFCELLSNYKFLNSTNCLDQSSNINSDKIPLLRAIIGGGLYPNMAHLRKARQIK
NRVRAIHNMTTDDGRRVNFHPSSVNSGATGFDSNYFVYYQRQKSTDLYLLDATMVFPMAL
IIFGDGVETGVVDNRHYLSVAQTYYFKCNTETISVVLDLRSSLQLLLLEKALHPTPIEEN
SNADKLIKAIELLLSIDEQMGDDFEIMSDEIDNI
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaggaagtaagtcgaatggacgtttggggaaaaacagctctcgtccgccagga
ctgaaaggcagagacattggcatgtactacagaaatcttgcccgacaacgtcagaactca
gacaccaaaaatgagcccaaaatcaatttgagttgcgatgttagtgttccgcctggagtt
attgcgcgtgtcaatgaatacattgatcagtttaaggcagcccggaaagctgggcataag
catttggatgaggatttccagcagcaatttcaccacatgttaagtatgaatttcgctgcc
ttcatagaagagacaaaaaaacagaaccaagatttgaatttacaaaacagaagcctagat
gcccaccttgtggacaaacaaaaggaacttcttcaaaatgcagactttcgagcgcgctac
gaagatcgtatgaaattgcccgcaatggttcacgcagcagaaatcatcgacgctgtggat
aagaatcaagttttgttaattgtgggcagcaccggctgtggtaagacaacccaggtgccg
cagtttctgctagacgattgcgtagcaaaaggaataggatcttgttgccgtatcgtgtgc
acgcagcctcgtcgaatctcagctataacagtggctgagcgtgttagttatgagcgtgtg
gaacccattggacattctgtaggttaccagatccgcttagagagccggaagcctcgcgaa
cgtgcctctataacgtactgcaccacaggagtgctcttgcagcagcttcaatctgatccg
ttgttgcacagcgtgagtattcttctcctggatgagatacacgagcggagcattgagacc
gatttgcttatggcattgctcaaaattatactgccacaccggcctaccttgaaagttata
ttaatgagtgcgacggtgcgggaggaagatttctgtaactactttaatagatgcccaatg
tttcgcatagaaggtgttatgcatccggtcgaagttttctacctggaggatattctcgct
atgacaggctatcaatttgactgccggaacagtaatcgatgccgtccccgcctggatcag
tcagatcacagaatcatgatcgaaccttatatacgacaggtgcgcgacaggtacgatagc
aaagtgcttgaacagctgcgagtaccccattccgaaggatgcgaggacatagagttcatt
gcgagtctcatatattatatatgtaacaataaatcagatggtgctatattggtctttgtg
cctggattcaataagatatcacagttacataacactctaaaaaacccacgttcacctttg
ggacagcggtggcgcaaccagttactcatctttccactgcattcaatgctgccctcggtg
gaacaacagtctgtgttcaggccagcccccaaaggcaaacgaaaagtaattatatccacc
attattgccgagacttcagtaaccattgacgatgttgtttacgtcattaatacgggccga
accaaagtaactgactatgatattgagacaaacatacaatcccttgaggagtgctgggta
acgcatgcaaatacgcagcagcgcaaggggcgtgcgggccgtgttcagccaggggtctgt
tataatctgtttagtcgggcacgagaggctctgatgtcagaagtgccaactccagaaatt
ttgcgttgcaaactagaagcgatcatacttagtctcaaagtactgcatatcgatgatcct
tacgcattgtttcaaacaatgatcgatccccctgctcaacgaaccgtgagcatagccatt
aatctacttaagcggatagaagcgcttgacattgatggtaagctgacaccgctgggcatg
catctggcgaagcttccaattgatccacaagtgggtaaaatgattgtgatatcagcactt
tttcgttgtgtggatcccattacatccgtcgcagctgctctctcctacaagaatccgttc
tatacgcccttgggtcaggaactgcgggtagaccaggccaagcgcaggatggcccaagga
atgcacagcgatcatctaatgatacataacacaatctgcaactatcgcgaaagcgtagag
aaccatagagatcgtgacttttgctacaacaactttctcagtcacatgacacttcagcag
ctagaacgtatgaagtctcaattttgcgagctcctcagtaactataagttcctaaattca
acgaactgtttggaccaatcatctaacattaattctgataaaattcccctgcttcgtgca
ataattggaggcggtctctatcccaacatggcgcatttgcgtaaagcccgacaaataaaa
aatcgtgttcgcgcgattcacaatatgacgactgatgatgggcggcgtgtaaattttcac
ccttcatcggtaaacagcggcgcgacaggatttgactcaaactattttgtatactatcag
cggcagaagtcaacagatctctatctgctcgacgctacaatggtgttcccaatggcactt
ataatttttggtgatggcgtcgaaactggcgttgtagataatagacattatctgtccgta
gcccagacctactattttaaatgcaatacagaaacgatttcagtagtgctggatttgcgt
tccagtttacagctcctgttgcttgaaaaagctttgcatccaacgcctatcgaggaaaac
agcaatgctgataaattaatcaaagccattgagcttctgctttcaattgatgaacaaatg
ggtgacgactttgaaatcatgtcggatgagattgacaacatttaa
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integrated database retrieval system
