Drosophila navojoa: 108658471
Help
Entry
108658471 CDS
T05898
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dnv
Drosophila navojoa
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dnv03036
]
108658471
Chromosome and associated proteins [BR:
dnv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108658471
microRNA pathway
RISC loading complex
108658471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
Cas3-like_C_2
Med16_bridge
Fe-S_biosyn
DUF745
Motif
Other DBs
NCBI-GeneID:
108658471
NCBI-ProteinID:
XP_030239877
LinkDB
All DBs
Position
Unknown
AA seq
2256 aa
AA seq
DB search
MAFHWCDNNLHTTVFTPRDFQVELLATAFERNTIICLGHRSSKEFIALKLLQELSRQGRR
NGKVSVYLTNQIDAENTSIYTMLTHLTDLKVWQEQRDQGISADHCWTDYHVSIHKPSSFL
LLLKTGNLQLSSVQLIVLEDCHDSAVYRSILPIFEEFILPAKSVDRPRILGLAGPLHSAN
CELEELHAMLDTLEQQMLCRIETASDIVTVLRYCAKPHEYIVQCAPLQLDHLSRVIVDIL
TTHKSFLSDHRYDPFEIYGTDQFMEDLKDIPDPKQDPLNVLDALLSVLHEMGPWCTQRAA
LYFYQRNEKLKVKTPHERHYLLFCLVNTALIEINALCEQTFQKLMVEDPLGTIERYSSPK
VRRLLRVLRCFKPAEAHNQAEGLRKMRHQVEQTDFNKLSQALKAKCHVVEQLDEKNVETS
SIVNNLQQLVQSSEKGAKVAAQAKANTDENAPGTQPTTTTTKSKSNGQQHSRRRMHTRRH
NRHHNDAGETLCALIYCNQNHTARVLFELLAELSRRDPHLKFLRCQYTTDRVADPATEPK
EAELEHRRQEDVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVIRWDPPTTYRSYVQCKGR
ARAAPAYHIMLVAPTYDPSDAAIKAAVQLNAQSHRFICATSSDDTANADQEVDSDSDDSA
LPNSLASDPYTFGTARGTVKILNPEVFSNQPPTVCDIKLQEIQDEAPAVLDAGNSSDDAI
SLSNTTPSDRSAERRPKQRFQCELHSMPDIESATEVNVPAIADNLTSTTQVLVHRMAQYR
EIEQMLLSKCANTEPAELEQIQAERFTSCLAAYRPKPHLSTGASVDLSTAIALVNKYCAR
LPSDTFTKLTALWRCASAVRDGVTLYQYTLRLPINSPLKHDIIGLPMPTQTLARRLAALQ
ACVDLHKIGELDDQLQPIGKEGFRALEPDWECFDLEPEDEQIVQQNDEPRPGTTKRRQYY
YKRIASEFCDCRPVAGAPCYLYFIQLTLQCPIPEEQNTRGRKIYPPEEAQQGFGILTLKR
IPKLSAFSIFTRSGEVKVSLDLARDRVVLTEEQIKCINVFLNYTFTNVLRLQKFLMLFDP
DSTENCVFIVPTIRSTADSRIIDWQFLELIQATGNMMPQPVPDEERQKQSFDAQRFQDAV
VMPWYRNQDQPQYFYVAEICPHLSPLSCFPGDHYRTFKHYYLVKYGLTIQNATQPLLDVD
HTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASLWRTA
VCLPCILYRINGLLLADDIRKQVSADLGLGRQQIDDEEFEWPMLDFGWSLSEVLKKSRES
KQKSDSKEAINEVTEDLAVETVAEPSLDKVEKTANELVIEGEEQLSSTAEFIEIGTWSND
MADDIASYSEGDDDEEDEDFLPVLPANVKFCDQQMRYGSPTFWDVSNTNSFKQPADSVQQ
RTAKPRGGGGAGKSAKVEGKPKYAYYESDNSLSSSSDDDDHVGPVHNYSSDDDDSDDIAA
GRIEFTSKNEAEAIETAQELEKRQKQMSIIQATNANERQYQETKNLLIGYNFEHAERSNS
VNYEQSIVRFKSEIETCGMLVSQDEELNIKRTEDSLVKVDKDGATLQLELLKQLLPYVPE
DAILAKLDSHESLELSDLVELNASWLQQHEPETYTVLGCGASFDNYNDHHLLSLDNKQIR
LEYQRESATNNESAVNPTERLLTGRPDAGFSFDQQPELVGHPGPSPSIILQALTMSNAND
GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEY
MIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLDIKNLSSVQICELVREK
AEALGLGTNADQPTATQQNADLDDSNETNDFSCFIPYNLVSQHSIPDKSIADCVEALIGA
YLIECGPRGALLFMAWLGVRVLPYQMEPAPADVSQRKPGSTKPDDNNMVTVYGDWPTPRS
PLLHFAPNAHRELEELLSGFEEFEASLGYTFRDRSYLLQAMTHASYTPNRLTDCYQRLEF
LGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFRHLSPGLN
DVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSL
DVVWQVFSNMMKPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFC
KGTFRGIGRNYRIAKCTAAKCALRQLKKQGLIAKKD
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccattggtgcgacaacaacctgcataccacagtgttcaccccgcgagatttt
caagtggagctgcttgcgactgcctttgagcgtaacacgattatctgtttgggtcataga
agctccaaggagtttatagcactcaagttactgcaagagctttctagacaaggacgccgg
aacggtaaagtgagcgtgtacctgaccaatcagattgatgctgagaacacgtccatctac
acgatgctcacgcatctcaccgatctcaaagtgtggcaggaacagcgagatcagggaatt
tcagctgatcattgctggaccgactaccatgtcagtatacacaagccgtcttcctttcta
ctcctgctgaaaactggaaatctgcaactaagtagcgttcaactgattgtgcttgaggat
tgtcacgacagcgctgtctatcgcagtattttgcccattttcgaggaatttattctgcca
gcaaagtctgttgatcgtccccgaatattggggctggcgggtcccttgcatagtgcaaac
tgtgagcttgaggaactgcacgccatgttggacacactggagcagcagatgctgtgtcgc
atcgaaacagccagtgacattgtcaccgtgctgcgatactgtgccaagccccatgagtat
attgtgcaatgtgcgcccttacaactggaccacttgtctcgtgtgatagtcgatatcctg
accacgcataagtcgttcctaagtgatcatcgctatgatccctttgagatttatggcacc
gatcaattcatggaggacttaaaagatattcccgatcccaagcaggatccactaaatgtg
ctagatgccctactttctgtgctccatgaaatgggaccttggtgtacgcaacgcgccgca
ctttatttctaccaacgcaacgagaagctgaaagttaagactccacacgaacgacactat
ttgcttttctgcctggtgaacacagcgctgatcgaaataaatgccctgtgcgaacaaaca
ttccaaaagctaatggttgaggaccctctgggtaccatagagcggtactctagtcccaag
gtgcggcggctgttgcgagtactacgctgtttcaaaccagctgaggcgcacaaccaggcc
gagggattgcgtaaaatgcgccatcaggtggagcagactgatttcaataaattgtcgcag
gcactcaaagccaagtgccacgtggttgaacagctggatgagaagaatgtggaaacaagt
agtatagttaacaatctgcagcaactcgtacaatcgtcagaaaagggagcaaaggtggcg
gcgcaagccaaagccaacaccgatgaaaacgctccaggaactcaaccaacgaccaccaca
acgaaatccaaatccaatggacagcagcactcaaggaggcggatgcacacaaggcggcac
aatcgacaccacaatgacgcgggcgagaccctttgtgctcttatctattgcaatcaaaat
cacacggctcgcgttctattcgaactgttggcggagttgagtcgacgcgatcctcatcta
aagttcctgcgctgccagtataccacggatcgcgtggctgatccggccacagagccaaaa
gaagctgaactggagcataggcggcaggaggatgtgctgaaacggtttcgcatgcacgat
tgtaatgtgctaattggcacctcggtgctagaggagggaattgatgtgcccaagtgcaat
ctggtaattcgctgggatccacccacaacttatcgcagctatgtgcaatgcaagggacgt
gcgcgagccgcacccgcttaccatataatgcttgtagcacccacgtatgatccgtctgat
gcggcaatcaaagctgcagtgcagctcaatgcgcagagccatcgatttatctgtgcaacg
tccagcgatgatacagcgaatgctgaccaggaggtggacagcgattcagacgactctgca
ctgcccaattcgcttgcttccgatccatatacttttggaactgctcgtggaacggtcaaa
atactcaatccagaggtgtttagcaaccaaccgcccaccgtgtgtgacataaaactgcag
gagatccaggacgaggcgcccgctgttctagatgccggcaattccagtgacgatgccatt
agcttatcgaataccacgcctagtgacagaagcgcggagcgtagacccaagcaacgcttc
caatgcgaactccattcgatgccagatattgagtcagccactgaggtaaatgttccggca
atagcagacaatctgacaagtacaacacaggtgctggtgcatcgaatggcacaatatcgc
gagatcgagcagatgctgttatcgaagtgtgccaatacggagcccgccgagctggagcag
atacaagcggagcgattcacgagctgccttgccgcctataggcccaagccgcacctgtca
accggcgcctcagttgacttaagtactgccatagccctggtcaacaaatattgcgcccgg
ctgcccagcgataccttcaccaagctaacagctctgtggcgttgtgcgagcgccgttcgt
gacggcgtcacgttataccagtacacgttgcgcctgcccattaattcacctctaaagcac
gatattattggtctgccgatgcccactcagacacttgcacggcggttggccgcactgcag
gcctgtgtggatctgcataagattggtgaactggacgatcagctgcagcccattggtaag
gagggctttcgggcactggagccagactgggagtgcttcgatttggagccagaggacgag
cagatagtgcaacaaaatgacgagccacggccgggcaccacaaaacggcggcaatattac
tacaagcgtattgcatcggagttttgtgactgccgtcctgtggctggcgctccttgctac
ctgtatttcattcagctaacactacagtgtcctatacctgaagagcagaacacccgcggt
cgcaaaatctatccgccggaagaggcacaacaaggcttcggcatattgacgctgaaacgc
ataccaaagctgagcgccttctcgatatttacgcgatctggtgaggtaaaggtatcgctg
gatctggcacgtgatcgtgttgtcctaactgaggagcagattaagtgcatcaatgttttc
cttaactatactttcacaaatgtgttgcgtctgcaaaagttcctcatgctcttcgatcca
gactccacggaaaactgcgtgttcattgtgcccacgataaggtcgacggcagacagtcgg
attattgactggcaatttctggagctcattcaagccactgggaacatgatgccacagcca
gtgccagatgaggaacggcaaaagcaatcattcgatgctcaacgttttcaggacgctgtc
gttatgccctggtatcggaaccaagatcagccacagtacttctatgtagccgaaatctgc
ccacatttgtcgccactgagctgctttccgggcgaccattatcgcacctttaagcattac
tatctagttaaatatgggctcaccatacagaatgcaacgcagcctctgctcgatgtggat
cacacgagtgcacggttaaattttctaactccgcgttacgtgaatcgaaagggcgtggca
ctacccaccagttcggaggaaacgaagcgggcaaagcgagaaaatcttgaacaaaagcag
attctagttcccgaactctgtacagtgcatccgttcccggcgtctctatggcgcacagca
gtttgtctgccctgcatcctgtaccgcatcaatgggctgctgttggctgacgatattcga
aaacaggtctctgcggatcttggcctcggccggcaacaaatcgatgatgaggagttcgag
tggcccatgctagactttggctggagcctctcggaagtgctgaagaaatcccgcgagtct
aagcagaaatccgatagcaaagaggcaatcaacgaagttacggaggacttggctgtcgag
acagtagctgagccaagcctggataaagtagagaagactgccaacgagctggttattgaa
ggagaagaacagttaagcagtacggcagaatttatagagataggcacctggtcgaatgac
atggccgatgacatagccagctattcagagggtgatgacgatgaggaggatgaagatttt
ttgccagtgcttcccgctaatgttaagttctgcgatcaacagatgcgatacggttcgccg
acgttttgggatgtcagcaataccaatagctttaagcagccagctgactctgtccaacag
cgaaccgctaaaccgcgaggcggtggtggcgcgggcaaatctgcaaaagtagagggaaaa
cccaaatacgcctactacgaatcggataattcccttagctccagcagtgatgatgacgat
catgtagggccggttcacaactacagctcggatgacgatgattcggatgacattgccgcc
ggccgcattgagttcacatcgaagaacgaggcggaggccatcgaaacagctcaagagctg
gaaaagcgccagaaacagatgtccattattcaagccaccaatgccaacgagcgccaatat
caagagacaaagaatttgctcatagggtacaacttcgagcatgcggagcgtagtaacagt
gtcaactacgagcagtccattgttcgctttaagtcagagattgagacctgcggcatgctg
gtgtcacaagacgaggagctcaacatcaagcgaacagaagacagcctagtcaaagtggac
aaagatggggctacgttgcagctggagctgcttaagcaactgctgccatacgtgccagaa
gatgcaattttggctaagctcgatagccacgagtcgctggagctctctgatctggttgag
ctaaatgcaagttggctgcagcagcatgaacctgaaacctacaccgtattgggttgtggc
gctagctttgacaactacaatgatcaccacctactgagcttggacaataaacagatcaga
cttgagtatcaaagagaatcggcaacgaataatgaaagtgctgtgaatccaacggaaagg
ctcttaacaggcaggcctgatgccgggtttagtttcgatcagcagccggagctggtaggg
catcccggacccagccccagcatcattttgcaggcactgacaatgtcaaatgccaacgat
ggcattaatttggagcgtctggagacaattggagactcgttcctcaagtatgcaattaca
acatatctgtatatcacctatgagaatgtgcacgagggcaagttaagccatctgcgctcc
aagcaagtggccaatctcaatctgtatcgattggggcgacgcaagcgactaggcgaatat
atgatagccaccaagttcgagccgcacgataattggctgccgccctgctattatgtaccc
aaagagctggaaaaggcgctaattgaggctaaaattccaacgcaccactggaagctggcc
gacctgctggatatcaagaatttgagcagcgtgcaaatctgcgagttggttcgtgaaaag
gccgaagcattgggcctgggcaccaatgcagatcagcccacagcaacacaacaaaatgct
gatttggacgactcgaacgagacgaacgatttcagttgcttcattccatataatctagtc
tcgcagcatagcataccggacaaatctatagcggattgtgtagaggcgttgattggcgct
tatctcatcgagtgtggtccgcgcggcgcattgctctttatggcctggctgggagtccgt
gtgctgccctaccaaatggaaccggctcctgcagacgttagccaacgcaagccgggcagc
acgaagccagatgacaacaacatggttaccgtatatggtgattggccgacgccgcgcagt
ccgcttctgcactttgcacccaatgcgcatagggagctggaggagctgcttagtggattt
gaggaattcgaggccagcctgggctatacttttagagatcgttcctatttactgcaggcc
atgacgcatgccagttacacgcccaatcgtctaacagattgttatcagcgtctcgaattt
ctgggcgatgccgtcctcgactacctgataacacgacatttgtatgaggatccacgccaa
cattcgccaggcgctttgactgatctacgttcggctttagtgaacaacacaatctttgcc
tcattggctgtgcggcatggcttccacaagtattttcgtcatctatcacccggactcaac
gacgtcatcgaccgctttgttcgcattcagcaggagaacggtcactgcataagcgaagag
tattatctgctctctgaggaggagtgcgatgatgccgaggatgttgaggtgcctaaggca
ttgggcgatgtattcgaatcaatcgccggtgccatatttctcgactcgaatatgtccctg
gatgtggtgtggcaggtattcagcaatatgatgaagccagagatagagcagtttagcaat
tctgtgccaaagtcacccatacgagagctgctcgagctggagccggaaacggccaaattt
ggcaagccagagaaactggcggacggacgtcgcgttcgcgtcactgttgatgtcttttgc
aagggcacattccgcggcatcggacgcaactaccgtatagccaaatgtacggctgccaaa
tgtgcactccgacagctgaaaaagcaaggcctgatagccaagaaagactaa
DBGET
integrated database retrieval system
