Drosophila navojoa: 108659173
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Entry
108659173 CDS
T05898
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
dnv
Drosophila navojoa
Pathway
dnv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108659173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnv03021
]
108659173
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108659173
Transcription machinery [BR:
dnv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108659173
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108659173
U7-dependent histone pre-mRNA processing factors
108659173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
108659173
NCBI-ProteinID:
XP_017967460
UniProt:
A0A484BJR5
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAQAQSNNDTRVPDEESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDA
LPYVDLIEADEIDLLFISHFHLDHCGALPWFLMKTSFRGRCFMTHATKAIYRWMLSDYIK
ISNISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGHVLGAAMFMIEIAGI
KILYTGDFSRQEDRHLMAAEVPPKKPDVLITESTYGTHIHEKREDRESRFTSLVQKIVMQ
GGRCLIPVFALGRAQELLLILDEFWSQNPDLHEIPIYYASSLAKKCMAVYQTYINAMNDR
IRRQIAVNNPFVFRHISNLKGIDHFDDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGV
IIAGYCVEGTLAKTILSEPEEITTLSGQKLPLNMSVDYISFSAHTDYQQTSEFIRMLRPN
HVVLVHGEQNEMSRLKLALQREYEADASTDIKFYNPRNTHAVDLYFRGEKTAKVMGHLAA
KKPEVGSKLSGVLVKRDFKYHLLAPSDLGKYTDMSMSVVTQRQSIPWTSSLATLQLLLDR
IGAGCVEIIEPDRKLRVFNCVELIVEQKIIIMEWHATHVNDVYADAVLACLMQSELGGTN
IKGATKQTKSEESRFRECLIETLQDTFGDSCVPKLFKGDLLPVTVSGKHAEINLETLTVQ
CVEDEVLRQMLNTTVQKLHQTLVSVH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcccaatcaaataatgacacccgagtgccagatgaagagagtgatctgtta
caaatcaagccgcttggagctggccaagaagtgggacgctcctgcatcatgctggagttc
aagggcaagaaaataatgttggactgtggcatacacccgggactgtctggcatggatgcc
ctgccctatgtggatttgatagaagctgatgaaattgacttgttatttatatcacatttc
catctggatcactgtggggctctgccatggttccttatgaagacaagctttcgcggtcgc
tgctttatgacacatgccaccaaagccatttatcgctggatgctctcagattatattaag
atcagcaacatatccaccgagcagatgctttacactgaagctgatctggaggcatccatg
gagaaaatcgagacaatcaattttcacgaggaacgagatgtgatgggtgtccgcttctgc
gcctacaacgctggccatgttctgggcgctgcaatgtttatgattgagatcgctggcatt
aaaatcctttatacgggcgacttttcgcgccaggaggatcgccatttgatggccgccgag
gtgccgcccaaaaagccagatgtgctgatcacagagtcaacctatggcacacacatacac
gagaagcgcgaagatcgcgagagtcgcttcacatcgctggtgcagaaaatcgtaatgcag
ggcggacgctgcctcattccggtcttcgccttgggccgtgctcaggagttgttgctgata
ttggatgagttctggtcccagaatccggatctgcacgaaatacccatctactatgcgtcc
tcgctggccaagaagtgcatggccgtctatcagacctacatcaatgccatgaatgatcgc
attcggcgtcagatcgctgtgaacaatccatttgtctttcgtcatatttccaatttgaag
ggcattgatcactttgacgatattggaccatgcgtcatcatggcgtcgccgggtatgatg
cagtcgggcctgtcgcgggagctcttcgagagctggtgcacagatcccaagaatggcgtc
atcattgccggctattgtgtggagggcactttggccaagaccatcttatccgagcccgag
gagatcacaaccctgtctggtcagaagctaccgctcaacatgtccgtcgactacatatcc
ttctcggcgcatacagactaccagcagactagcgaatttattcgcatgctgagacctaac
catgtggtgctcgtccacggggaacagaatgagatgtcgcgcttgaagctggcgctgcag
cgtgaatatgaagcagatgccagcacggacatcaagttctataatccccgcaatactcac
gctgtagatctctatttccgcggcgaaaagacagctaaggtgatgggtcatctggcagct
aagaagcccgaggtgggcagcaagctctccggcgtgctcgtaaagcgcgatttcaagtac
catctgttagctccctcggatctgggcaagtacaccgacatgagcatgtcggtggtcacc
cagcgtcagtcgataccctggaccagttctctggccacgcttcaactgctgctcgatcgc
attggcgctggctgtgtggagatcattgagccggatcgcaagttgcgcgtcttcaactgc
gtcgaactgatcgtggagcaaaagattattatcatggagtggcatgccacccatgtgaat
gatgtctatgcggatgccgtgctggcctgcctaatgcaatccgagctgggtggcaccaac
atcaagggtgccaccaagcagaccaaatcggaggaatcccgctttcgcgagtgcctcatc
gagacgctgcaggacaccttcggcgacagctgtgtgcccaagctattcaaaggcgacttg
ctgccggttacagtcagcggcaagcacgccgagatcaatctggaaacattgactgtgcaa
tgcgttgaggatgaggtgctgcggcaaatgctgaataccaccgtgcagaagctgcaccag
accttggtctctgttcattga
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integrated database retrieval system
