KEGG   Drosophila navojoa: 108659292
Entry
108659292         CDS       T05898                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
dnv  Drosophila navojoa
Pathway
dnv03013  Nucleocytoplasmic transport
dnv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dnv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108659292
  09122 Translation
   03013 Nucleocytoplasmic transport
    108659292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dnv03019]
    108659292
   03041 Spliceosome [BR:dnv03041]
    108659292
Messenger RNA biogenesis [BR:dnv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108659292
Spliceosome [BR:dnv03041]
 Complex C
  Other components
   EJC/TREX
    108659292
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108659292
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_EML_2 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 EIF3I Beta-prop_Aladin ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_EML Beta-prop_Vps41 Tricorn_2nd WDR90_beta-prop_4th RMC1_N WD40_MABP1-WDR62_1st PD40 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SPT8 B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 WD_LRWD1 Beta-prop_Nup120_160 DPPIV_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 108659292
NCBI-ProteinID: XP_017967632
UniProt: A0A484BM20
LinkDB
Position
Unknown
AA seq 322 aa
MSRNEQTFEDLKSYFRSHSKIREQRPHMSKVHSVCWNANGCHLASGSFDKTVAVYTLERD
RFTKNNVFRGHTASVDQLCWHKTNPDQFSTASGDKTVRIWDIRVGKCVSVTNTKGENINI
AWSPDGKTIAVGNKEDLITFIDTRTNKIRVEEPFSFEVNEISWNNTNDLFFLTNGMGCMH
VLSYPSLEHYITLKAHPANCICIEFGPTGKYFATGSADAQVSLWDANELACLRMISRLEW
PVRTISFSHDERLIASASEDLLIDIAYTETGERVTDIHVDASTFTVAWHPKQYLLAYACD
EKETIGDRRRDVGNVKIFGFPE
NT seq 969 nt   +upstreamnt  +downstreamnt
atgagtcgcaacgagcagacattcgaggatctgaaatcctattttcgatcacacagcaaa
atacgcgagcagcggccgcatatgtcaaaggtgcactcggtttgctggaatgcaaatggc
tgccacttggcatcgggatcctttgataagactgtggctgtgtacaccctggagcgggat
cgctttacgaagaacaacgtgttccgcggccacacagcctccgtggatcagctgtgctgg
cacaaaaccaatccggaccagttcagcacggcgagcggcgacaagaccgtgcgaatctgg
gacattcgagtgggcaaatgtgtctcggtcaccaacacaaagggcgagaacataaacatc
gcctggtcgcccgacggcaaaacgattgccgtgggcaacaaggaggatctgatcacgttc
attgacacgcgcaccaacaagatccgcgtggaggagcccttcagctttgaggtgaatgag
atctcgtggaacaacacgaacgacttgttcttcctgaccaacggcatgggctgcatgcac
gtgctcagctaccccagtctggagcactacataacgctgaaggcgcatcccgccaactgc
atatgcattgagtttgggcccacgggcaaatactttgccacgggctcagcggacgcgcag
gtctccctgtgggatgccaacgagctggcctgcctgcgcatgatcagccgactggagtgg
ccagtacgcaccatatccttcagccacgacgagcggctgatagcctcggccagcgaggat
ctgctcatcgacattgcgtacacggagacgggcgagcgagtcacggacatccacgtggat
gcctccactttcactgttgcgtggcatcccaagcagtatctgctcgcctatgcctgcgac
gagaaggaaaccattggcgatcgtcggcgcgatgttggcaacgtcaagatattcggattt
ccggaataa

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