Drosophila navojoa: 108659841
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Entry
108659841 CDS
T05898
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X2
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
dnv
Drosophila navojoa
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnv03021
]
108659841
Transcription machinery [BR:
dnv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108659841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT_EF3_N
HEAT
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
108659841
NCBI-ProteinID:
XP_017968444
LinkDB
All DBs
Position
Unknown
AA seq
1951 aa
AA seq
DB search
MTSRLDRLFILLESGSTAATRHAAAKEIGEVQKLYPHELHTLLNRLVGYLHSASWETRIA
AAQSVEAILKQVPQWQPELQLSAIKLKKERSASDAAEEDSCQSNASSSTTTTPCSERLLS
FDEFDLQQILQKGARLIGSEGNEFDVQEEQPASGGAAEDQSEGVRLSRQRALLNDKLGLT
TAAKLGVNLTDMITDEDVALARSGTSYNVNAEKLPVEHILNIKQANGGGGGAVSASGQRL
SCREMNRAKRKARQSTANSASVVTPTCSRRNSTAGIGAGSNCSSGSSCSNNNSNSNGATV
TGDEPEKKKLKSSDRHEIFYSLNAAVPDATGNWVDAVSWPLENFCARLFIDLFHAKWEVR
HGAATALRQLINLHGKGAGKCVQQSPEQMHEAHGRWLEDAAIRLLCVLCLDRFGDFVSDQ
VVAPVRETCAQVLGTLVKAIDEPKVHRIVDILLQLIRHKNEWEVRHGGLLGLKYVFVVRE
ELLSIHLPKSISDILSGLLDAVDDVGAVAAATLIPVAVWLPKLLNAKQVSAIVKMLWDLL
LDQDELTSACNSFMGLLAAILCLPRAASWIEMEPMGSLVPRLFPFLSHSTSSVRRSTLKT
LLTLTSGGEAEPKQTPSDVKLEPDKGADSTNGQLKVLKLNFGVVDWNWQLLQQSLRHIYQ
RILVEPQEDIQSLAYQVWSNLIKHADLGALLHAACPHVSSWICLAMQPPRLAFDSAVIIR
AVGDTASVSGASTRRRTPRMGDDLGGVALAHTNAMQKLYLGGSEATPLEVREANFMRARI
TASRALGALSHYLVQPAPGVLYTPQVESPTECYTKVLLGHLNAHSAVQRIVCGLIIAFWA
LEDEPVRPGPPNLQEKLHQCVSEYFYYDEVAMSLTRLLQEAQDFIATLKQNKIPINDFNN
AKILTLDQIEAVANTLSDNLRSYTLKPKVLDMLLERKRSLQTSYQQTTSEQGAYHVSAQA
ALASAICALHCLPDKLNPVVKPLMESIKREQCVPLQQLSAEFLVHLMDQVCDRNPSPNSK
IMNNLCTLLRSDAEYTPKLVMPLHTLLETRPTTSVSENDNCDYYGILTLKQQQAATSAPS
SGSSAGTRTGATTLATTPRGPGRPPASEVLAAAAAAAASCDFSTRQAKEAEARQCRIQRL
GAACAIAKLCSTFGERIVDKVPIFQQLMFGKLEQFVASTNAQTLASTLPELTSCNELISS
LQLIETAAPHLHVALHEQLFALLPHLGFIVRHPLKVLRHMAARCIAILAEIDPCRTMQFV
VTELLGLLLKIEQPIERQGAVEAIERIVNRLQIRVVPYIVLLVVPLLGAMSDADESVRLL
ATHSFATLIQLMPLDSNESGKTATQIKSEPLLERKTRDREFLDYLFAPKTIPDYRVPVTL
SVELRGYQQAGVNWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHVQRQEAKLAPLPS
LVICPPTLTGHWVYEVEKFLAQSPVLRPLHYFGFPIGREKLRSQIGTSCNLVVASYDTIR
KDIDYFSGIHFNYCVLDEGHIIKNGKTKSSKAIKQIKANHRLILSGTPIQNNVLELWSLF
DFLMPGFLGTEKQFIQRYSRPILASRDGKSSAKEQEAGVLAMEALHRQVLPFLLRRVKED
VLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLDDTENLGTKTHIFQALRYLQ
NVCNHPKLVLRQSGDERSNVVAQLALNNSTLDDIEHSAKLPALKQLLLDCGIGVQTESVS
QHRALIFCQLKAMLDIVEHDLLRKHLPSVTYLRLDGSVPASLRQDIVNNFNSDPSIDVLL
LTTLVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEK
IMSLQKFKILTANTVVSADNASLQTMGTSQIFDLFNGDNNKASNSGTAATAAGGSGGMSM
NTIIENLPELWSEHQYEEEYDMGNFVQALKK
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccgactcgatcgccttttcatactactcgagtcgggctccacggcagccacg
cgccatgcggctgccaaggaaattggcgaggtgcaaaaactatatccacatgagctgcac
acgctgctgaaccggctagtgggatatctgcacagtgcctcgtgggagacacgcattgcc
gccgcgcagtcagtggaggcgatactgaagcaggtgccgcaatggcagccggagctgcag
ctgagcgccattaaattgaagaaagagcgctcggccagcgatgcggccgaagaggacagc
tgtcaatcgaatgcctcttcgtcgactacgacgacgccatgcagcgagcgattgctcagc
tttgatgagttcgatttgcagcagattttacagaaaggcgcccgactgatcggctctgag
gggaatgaattcgatgtgcaggaggagcagcctgccagtgggggcgccgccgaagatcag
agcgagggcgtccgactgagtcgccagcgtgccctgctcaacgacaaactgggcctcacc
actgccgccaagctgggcgtcaatctgactgacatgatcaccgacgaggatgtggcattg
gcgcgctctggcaccagctacaatgtgaatgccgagaagctgcctgtggagcacatactg
aatatcaagcaagccaatggaggaggaggaggtgctgtcagtgcgtcgggccagcggctc
agttgccgtgagatgaatcgtgccaagcgcaaagcgcgtcaaagcaccgccaattccgcc
tccgtagtcacgcctacttgcagtcgccgcaattcaacagccggcattggcgccggcagc
aactgcagcagcggcagcagctgcagcaacaacaacagcaacagcaacggtgccacagtc
acaggcgatgagccagagaagaaaaaactgaaatcaagcgacagacacgagattttctac
agcttaaatgccgctgtgccagatgcgacgggcaactgggttgatgcggtctcatggccc
ttggagaacttttgtgcgcggctctttattgatctctttcacgccaaatgggaggttcgc
catggggcggccactgcgctgcgccaactcatcaatctgcacggcaagggagcaggcaaa
tgcgtgcagcagagcccggagcagatgcacgaggcgcacggtcgatggctggaggatgct
gcaattcggctgctgtgcgtgctatgccttgatcgattcggagactttgtgtctgaccag
gtggtggctccggtgcgtgagacatgtgcgcaagtgctgggcaccctggtcaaggcaatc
gatgagcccaaggttcaccgcattgtggacattctgctgcagctgatacgccacaagaac
gagtgggaagtccgccatggcggcctgctgggccttaagtatgtgtttgtcgtacgcgag
gaactgttgtccattcacctgcccaagtcaatatcggacatactatcgggtctactggat
gccgttgatgatgtgggcgcggtagcggctgcgacgctaatcccagtggccgtgtggctg
ccaaagctgttgaatgccaaacaagtgtcggccattgtgaagatgctgtgggacttgctg
ctcgatcaggatgaactgacgtcggcctgcaacagcttcatgggtctgttggcagctata
ctatgtttgccacgggcagctagctggatcgaaatggaacccatgggcagcttggtgcca
cgcctatttccgttcctgtcccacagcaccagctcggtgcgtcgctcgacactgaagaca
ctgctcacactaacgagtggcggcgaggctgagcctaaacaaacaccctctgatgtcaag
ctggagccagataagggagccgacagcaccaatggtcagctaaaggtgctgaaactcaac
tttggcgtcgtggactggaactggcaattgcttcagcaaagcctgcgtcacatttaccag
cgtattttagttgagccgcaggaagacatacagagtttggcgtatcaggtctggtcaaat
cttatcaagcatgcggatttgggtgcgctgctgcacgcagcctgcccgcacgtctcgtcc
tggatatgcctagccatgcagccaccacgtctggcctttgactcggccgttatcatcaga
gctgttggcgatactgcttctgtgtcgggagccagcacgcggcgtcgcacccctcgaatg
ggcgacgatttgggcggagttgccttggctcatacaaatgccatgcagaagttgtatttg
ggcggcagtgaggcgacaccactagaggttcgggaagcgaacttcatgcgcgcgcgtatc
acagcatcgcgagctctgggcgctctctcgcactacctggtgcagccggcgccaggcgtg
ctttataccccacaggtggagagtcctacggagtgctataccaaagtgttgctgggccat
ttaaatgcgcactcggcggtgcagcgcattgtgtgcggtttgataattgccttctgggca
ctggaggatgagcctgtgcgacctggaccaccaaatctgcaggaaaagctgcatcaatgt
gtgtcagagtatttttactatgacgaagtagccatgtcgctaacacgactgctgcaggag
gcacaggactttatagcgacactgaagcagaacaaaataccaatcaacgacttcaataat
gccaagattctcacgctcgatcagatcgaagcggtggccaacacgctgagtgacaatctg
cgcagctatacgctcaaaccaaaggtgctggacatgctgctggaacgaaagcgcagcctg
cagacctcctatcagcagacgaccagcgaacagggcgcctatcacgtcagcgctcaggcg
gcattggccagtgccatctgtgcgctgcattgtcttcctgacaagctaaatcccgttgtc
aagccattgatggagtcgatcaagcgagagcaatgcgttcccttgcagcaactatcagcc
gaattcttggtgcacctcatggaccaagtttgtgaccgaaatcctagtcccaatagcaaa
atcatgaacaatctctgtacgctgctgcgcagcgatgcggagtatacccccaaactagta
atgccgttgcacacgttgttggagacacggccgactaccagcgttagtgagaacgacaat
tgcgactattacggaatacttacgcttaagcagcaacaggctgcgaccagtgcgcccagc
agcggcagcagcgcgggcactcgaacgggcgccacgaccctggcaacaacgccgagggga
ccgggcaggccgccggccagtgaagtattggctgcggcggcggcggctgcggccagttgt
gatttcagtacccggcaggccaaagaggccgaggcgcgacagtgtcgaattcagcgattg
ggagccgcctgcgccatagccaagctttgcagcacattcggggagcgcattgtggacaag
gtgcccatatttcagcagttgatgttcggcaagctggagcaattcgtggccagcacgaat
gcgcagacgctagctagcacgctcccggaactgacgtcatgcaacgaattaatcagctca
ctgcagcttatcgaaacggctgcgccgcatttgcacgttgcgctgcatgagcagctgttt
gcgcttctgccacatctcggcttcattgtgcggcatccgttgaaggtattgcgtcacatg
gctgctcggtgcatcgccatcttggctgagatcgatccatgccgcaccatgcaattcgtg
gtgacggagctgctggggctgctactcaagatagagcagccgattgagcgacagggcgct
gtggaggctattgagcggatagtcaaccgactgcaaatccgcgtagtgccatatatagtt
ctgctagtggtgccactgcttggtgctatgagtgatgcggatgaatcggtccgcttgctg
gccacccactcctttgccaccctaatccaactgatgccattggacagcaatgagagcggg
aagacagcaacacagatcaaaagcgagccgctgctagagcgcaagacgcgagatcgtgag
ttcctcgactatctgttcgcgccaaagactatacccgactatcgtgtgccggtgacgctc
agtgtggagctgcgcggctatcagcaggcaggcgtcaactggttgtggttcctcaataag
tacaatctgcacggcatactctgcgacgatatgggcctgggcaagaccctccagaccatc
tgcatattagccggtgaccatgtgcagcgccaggaggccaagctggcgccacttcccagc
ctagtcatctgcccaccaacactcacaggccactgggtgtacgaggtggaaaagtttctg
gcccagtcgccagttttgcggccattgcattacttcggctttcccattggacgcgagaaa
ctgcggagccaaattggcactagctgcaacctggtggtcgcttcgtacgacaccattcgg
aaggacattgactacttcagtggcatccacttcaactactgtgtgctggacgaggggcac
atcataaaaaatggaaagacgaagagctccaaagccataaaacagataaaggcgaaccat
aggttaatcttgtctggcacgcccattcagaacaatgtgctggagttgtggtcgctgttt
gatttcctaatgcctggctttctgggtactgagaaacagtttatacaacggtactctcgg
cccatattggcctcacgcgatggcaaaagctcggccaaggagcaggaagctggcgtgctg
gccatggaggcattgcatcgccaggtgttaccattcctgctacgccgtgttaaagaagat
gtgctgaaggacctgccgcctaaaatcacccaggatctgctgtgcgaactgagtccgttg
cagctgcgcctgtacgaagactttagcaataaacatttgaaagactgtttggataagttg
gacgatacggagaatctcggtaccaaaacacacatattccaagccctacggtatttgcaa
aacgtttgcaatcaccccaaactagtgttgcgccaatccggcgatgagcgcagcaatgtc
gtcgcccagctcgcacttaacaatagcacactggatgacatcgaacattcggctaagctg
ccagccttgaagcaattacttttggattgcggcattggtgtccaaacggagtcagtcagt
cagcaccgggcactcatcttctgccagttgaaggccatgctggatatcgtggaacacgat
ttgttgcgcaagcatttacccagcgtaacatatctgcgactggacggtagcgtgccagca
tccttgcgccaggatattgtgaacaacttcaacagtgatcccagcatcgatgtgctgctg
ctgaccactttggttggtggcttgggtctgaatctgactggtgctgatactgtcattttt
gtggagcatgactggaatcccatgaaggatctgcaggctatggatcgggcgcatcgcatt
gggcaaaagaaagtggtcaacgtgtatcgcctaattacacgcaactcgctcgaagagaaa
attatgagcctgcaaaagtttaagatcctaaccgctaatacggtcgtcagtgccgacaat
gcttcgcttcagaccatgggcacctcacagatctttgatctgttcaatggtgataataac
aaggccagtaacagcggaactgctgcaacagccgctggaggcagtggtggcatgtctatg
aatactatcattgagaaccttccggagctgtggtccgagcaccagtatgaggaagaatac
gacatgggcaactttgttcaggctttaaagaagtag
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integrated database retrieval system
