Drosophila navojoa: 108659869
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Entry
108659869 CDS
T05898
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
dnv
Drosophila navojoa
Pathway
dnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108659869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
108659869
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108659869
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
ANAPC3
ANAPC8
Paf67
DUF963
Motif
Other DBs
NCBI-GeneID:
108659869
NCBI-ProteinID:
XP_017968498
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MCVLLLFFIFGMDPADSPTKTQDSDDENYNLLCQAHEQFNNREYDRCLELLQRLETKGES
SGLILRHNRAVVNYYKTGCLEHQTLLNELEKLGNDQPAPGEPTVPLALKNAGSALTVARY
NKAVIYFHRHMYGTALDRLAPLVTRLEALEKQMAALVATLQLQLLLATNQLNRAEAFLDY
LQYKLNLVASAPGASPSSSLEEPTTTAAAAVSAAAAAAAAAAAASSTASTAVASSTPILD
SSVTRAAGENGSILRLLQLLTHVLNRKPVVITEDGTPEIAALKAQQYYIMKDFQMAAKQL
MRINDDCTQAGTVTPQLSTCIANNMGVIHLRVRHYAIAAKFFQNALRFDQQLTSNLRQCS
LQTMGLARSCEIMYNLGIAMLHLRRPKEAFQCFLVPVKQYHSNPRLWYRMAEACIMEHEA
QKLPGKDRYTIDSSLNSSGSKPYGTHSTAVPEPTLEFAALCLRNALTLSLQYKASFYMAA
SPDETLDPKDSSQQLWSQTQDNNFCNPSKPISLESMENMLDAIYAAHSFVSLRLGDHVTA
LEMAKHLLQSERLSDAHKLLGHMYAGEALMMMDKSGEARDHLEPTFVNSLNALDLETRDW
QLKSLDAAQNVVRYNLAVTFALQNDFQAAKSLLGTLTHPIVSKKALTLHRYIELKISATA
LH
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgcttcttttgttttttatttttggcatggaccctgcggattctccgacgaaa
acgcaagacagcgatgacgaaaattacaatctactctgccaggcccatgaacagttcaac
aatcgagagtatgaccgatgcctggagctgttacagcggctggagacgaaaggtgagagc
agcggccttatactgcgtcacaatcgggcggtggtgaattattataaaactggttgcctt
gaacaccagacgctgctcaatgaactcgaaaagctgggtaatgaccaacccgcgcctggc
gagccgactgtgccgcttgcactaaagaatgccggcagcgcccttactgtggcacgctac
aacaaagcggtcatatatttccatcggcatatgtacggcacggcactagataggctagcg
ccgctggtgaccaggctggaggcactggagaagcaaatggctgcgcttgttgccacgttg
cagttgcagctgctgttggccaccaatcagctaaatcgcgctgaagcatttctcgactat
ttgcagtataaattgaatctagtggctagtgcacccggcgcaagtcccagcagcagtctg
gaggagccgacgacaacagcagctgcagccgtgtctgccgctgctgctgctgctgctgct
gcagctgctgcttcctcaacagcgtccacagccgtggcgagctcaacgccgattctagat
agtagtgtcacgagagctgctggcgaaaacggtagcattctccggctattgcagttgcta
acacacgtgcttaatcgcaagcctgtagtcataaccgaggatgggacgccagagattgcg
gcgctgaaggcgcagcagtattacatcatgaaagactttcagatggccgctaaacagctg
atgcgcatcaacgatgattgcacccaggccggcactgtgacgccgcagctgagcacgtgc
atcgccaacaatatgggagtcatccatctgcgggtacggcattatgcaatcgctgcaaaa
ttctttcagaatgcactgcgcttcgatcagcagctaacatcaaatttacggcaatgctct
ctgcaaacgatgggattggcaagatcgtgtgagatcatgtataatttgggcatcgcgatg
ttgcatctacgtagacccaaagaggcgtttcagtgcttcttggtaccagtcaagcaatac
catagtaatccacgcctttggtatcgaatggccgaagcctgcattatggaacatgaggcg
caaaaactacctggaaaggatcgctatacgatagacagcagcctaaactcatcgggatct
aaaccatatggaacacactccactgcggtgccagagccaacacttgaatttgcagctctt
tgcctgcgaaacgctctcaccctatctctgcaatacaaggccagtttttatatggcagcc
tcgcctgacgaaacactggatccgaaagactcatcacagcagctatggagtcaaacacag
gacaataacttttgcaacccatcgaagccgattagcttagaatcaatggaaaacatgttg
gatgccatttatgcggcgcacagctttgtgtccctgcgcttgggtgatcacgtcaccgcc
ctggaaatggccaagcacctgctgcagagtgagcgtctctccgacgcacacaaattgctg
ggtcacatgtatgcgggcgaggctttaatgatgatggacaaatccggggaggcgcgtgac
catctggagccaacttttgtgaattcgttaaatgctcttgatctggagacacgtgactgg
cagctaaagtccctcgatgctgcccagaatgttgttcgatacaatttggccgttactttc
gccttgcaaaacgatttccaggcagccaaaagtctgctgggtacgctgacccacccgatt
gtaagcaaaaaagcgctgactttgcatcgttacattgagctcaagataagcgccactgca
ctccattag
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