KEGG   Drosophila navojoa: 108659937
Entry
108659937         CDS       T05898                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
dnv  Drosophila navojoa
Pathway
dnv03030  DNA replication
dnv03410  Base excision repair
dnv03420  Nucleotide excision repair
dnv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dnv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108659937
   03410 Base excision repair
    108659937
   03420 Nucleotide excision repair
    108659937
   03430 Mismatch repair
    108659937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dnv03032]
    108659937
   03036 Chromosome and associated proteins [BR:dnv03036]
    108659937
   03400 DNA repair and recombination proteins [BR:dnv03400]
    108659937
DNA replication proteins [BR:dnv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108659937
  DNA Replication Termination Factors
   ELG1-RFC complex
    108659937
Chromosome and associated proteins [BR:dnv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108659937
DNA repair and recombination proteins [BR:dnv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108659937
  Check point factors
   HRAD17(Rad24)-RFC complex
    108659937
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid AAA_lid_RFC1 DNA_pol3_delta2 AAA_16 AAA_22 AAA_assoc_2 Mg_chelatase SLFN-g3_helicase AAA_11 AAA_24 Rad17 DUF815 Gp44_lid AAA_30 DNAX_ATPase_lid RuvB_N AAA_5 AAA_19 AAA_14 bpMoxR nSTAND_NTPase5 AAA_7 ResIII AAA_3 Penaeidin AAA_28 AAA_25
Other DBs
NCBI-GeneID: 108659937
NCBI-ProteinID: XP_017968607
UniProt: A0A484BVL8
LinkDB
Position
Unknown
AA seq 354 aa
MQAFLKAGKSGNSTTDKQASNAPTERRKPPAPWVEKYRPRSVEDVVEQSEVVAVLRKCVE
GADLPNMLLYGPPGTGKTSTILAAARQIFGDMYRDRILELNASDERGINVVRTKIKNFAQ
LTASSVRPDGRPCPPFKIIVLDEADSMTHAAQAALRRTMEKESRSTRFCLICNYVSRIIV
PITSRCSKFRFKALGETQIIARLKHICMQENVNIDPDAYKSIVKISGGDMRRAITTLQSC
YRLKGADHTINTDDLLEMSGIIPEHYLEDYLEVCRSGKYERLEHFVREIGYSAYSVGQMM
EQFVEFIVRCGSLTDKQKAIICDKLGECCYRLQDGGSEYLQIMDLGCTIILALK
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgcaggcatttttaaaagctggaaagtctggcaatagtactacagacaagcaagcatct
aatgcgcccacagaacgtcgcaagcctcctgcgccctgggtggaaaaataccgcccaaga
agcgtggaagatgtagtcgagcaatctgaggtggtggcagtactccgcaaatgtgttgaa
ggtgccgatttgcctaacatgctgctctacggcccgcccggcacaggcaaaaccagcacg
attctcgcagccgctcgtcaaatctttggcgacatgtaccgcgatcgcatactggagctg
aatgcctctgacgagcgcggcattaatgtggtgcgcaccaagatcaagaactttgcacag
cttacggcaagcagcgtgcgacccgatggtcggccgtgtccgccctttaaaatcattgtg
ctggacgaggctgactccatgacacatgcggcacaagccgcgctgcgtcgcaccatggaa
aaggagagtcgcagcacccgcttctgcctcatctgcaactatgtgtctcgcatcattgtg
cccattacgtcgcgttgctccaagtttcgcttcaaggcgctgggcgagacgcaaatcatt
gctcgactgaagcacatctgcatgcaggaaaacgttaacattgatccagatgcatacaag
tccattgtgaagatatccggcggcgatatgagacgagccataactactctgcagtcctgc
tatcgtctgaaaggcgccgaccacactattaacacagacgatctcctcgagatgtcgggc
attataccagagcattatctggaggattatctcgaggtctgtcgctctggcaagtatgag
cgcttggagcatttcgtacgagagattggctactcggcttacagcgttggccaaatgatg
gaacagttcgtggagttcattgtgcgctgcggatctctaaccgacaagcagaaagccatc
atatgtgacaaactgggcgaatgttgctatcgtctgcaggatggcggctctgaatatttg
caaattatggatcttggctgcactatcattcttgcgcttaaataa

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