Drosophila navojoa: 108660041
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Entry
108660041 CDS
T05898
Name
(RefSeq) collagen alpha chain CG42342 isoform X1
Organism
dnv
Drosophila navojoa
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
HeLo
PgaD
Motif
Other DBs
NCBI-GeneID:
108660041
NCBI-ProteinID:
XP_017968772
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MRKHKAPPGGHPISSNSNSSPSSVTRTMPTVHNDTNAAGTTATATVRATAIATTATSTTA
AATALDMEQQRMLLGHAAVDSATPAAAATAAATSPTSRLATPAATCQQRSATVRVANGKE
RPRYTVQLMSLLHIASYVLCLCAFSFALYANVRQTRVEQRLQRLQELDARIVELELRLEQ
QQLLHWPADQPQILSSPISSSSSSNSDSNSNSENGTSSHLVLHVRRELHRLRRDVSHLQL
TRRQQRRQAAEAAAAAAAANLGGSPAANGECQCQPGPPGPPGPPGKRGKRGKKGDPGEKG
EAGLNGISGEKGAAGKPGDKGQKGDTGHPGVDVFQTVKGLKRSVTTLHGGTLGYAEIVAV
KDLQEAGVNVSASTVIQLKGEPGEPGPPGPPGEPGVAGVPGERGPPGETGQQGLQGEAGQ
PGPIGPPGVPGAPGMKGDKGDRGDRGLTTTIKGDEFPTGIIEGPPGPPGPPGPPGERGEP
GQMGPIGPAGPPGEKGPRGKRGKRLFGPGGAKLEDDYDDPPVTLLRGPPGPPGAAGKDGR
DGRDGSKGEPGEPGEPGSLGPRGLDGLPGEPGIEGPPGLPGYQGPPGEKGDRGDIGPPGL
MGPPGLPGPPGYPGVKGDKGDRGDSYRKMRRRQDDGMSDAPHMPAIEYLYGPPGPPGPMG
PPGHTGPQGERGLDGRKGDPGEKGHKGDQGPMGLPGPMGMRGESGPSGPAGKAGIPGPPG
LDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKG
EQGVPGLDAPCPLGVDGLPLPGCGWRPPKEPIVSTPMHKDYLPDVTQPESNASDYEQEDE
DEEDQPEDNENEYDEYQEHLHNND
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacataaagcgccgcccggcggccacccaatcagttctaattccaattccagt
cccagttccgtgacaaggacaatgccaacagtgcacaacgacacaaacgcagcaggcacg
acagcaacagcaacagtgagagcaacagcaatcgcaacaacagccacatcaacaacagca
gcagcaacagcactcgatatggagcagcagcggatgttgctgggccatgcagctgttgac
agcgctacgccagcagcagcagcaacagctgctgcaacaagcccaactagtcgccttgca
acaccagcggccacctgtcagcagcgatctgcaacagttcgagtagccaacggcaaggaa
cggccgcgatatacagtccagctcatgtccttgctgcacatcgccagctatgtgctgtgc
ctgtgtgcgttcagctttgcgctctatgcgaatgtgcggcagacgcgtgtcgagcagcga
ctgcagcgcctgcaggagctggacgcacgcattgtcgagctggagctgcgcctggagcag
cagcaattgctgcactggcccgccgaccagccccaaatcctctccagccccatcagcagc
agcagcagcagcaacagcgatagcaacagcaacagcgagaatggcacatcttcgcacctc
gtgttacatgtgcgccgcgagctacatcgtctgcgtcgcgacgtctcccacctgcagctg
acgcgacgtcagcagcgccgacaggcggccgaagcggctgcagcagcggcagcagcgaac
ctcggaggcagcccagcggccaatggcgagtgtcagtgccaaccaggtccacccggtcca
cctggaccgcccggcaagcgagggaagcgcggcaagaagggcgaccccggcgagaagggc
gaggcgggtctcaatggcatcagcggcgagaagggcgcggccggcaagcccggcgacaag
ggccaaaagggcgataccggccatccgggcgtcgacgtcttccaaacggtgaagggcctc
aagagatcggtgacaacgctgcatggcggcacccttggctatgcggaaattgtagctgtt
aaggacttgcaagaagcgggcgttaacgtctccgcttcgacggtcatacagctgaagggt
gagccgggcgagcctggtccgccgggaccgccgggagagccgggcgtagcgggcgtgccg
ggcgagcgtggaccaccaggcgaaactggacagcagggactacagggtgaggccggacag
ccaggcccgattggaccgcccggtgtgcctggcgcacctggcatgaagggcgacaaaggc
gatcgcggtgatcgcggactcaccacaaccatcaagggtgacgagttcccaacgggcatc
atcgagggtccgccgggaccgcccggaccacctggcccgcccggagagcgaggagagccc
ggacagatgggacccatcggaccggccggaccgccgggcgagaaaggaccacgcggcaag
cggggcaagcggctatttggacccggcggcgccaagctggaggacgactatgatgatccg
cccgtcacactgttgcgtggcccacccggaccaccgggcgccgcgggcaaggacggccgc
gacggacgtgatggcagcaagggtgagcccggagagccaggtgagccgggctccctgggc
ccacgtggcctggacggcctaccgggtgagccgggcattgagggcccacctggcctgccc
ggctaccagggaccgcccggcgagaagggcgatcgcggcgatattggtccacctggtctg
atgggaccacctggcctgcccggaccaccaggctatccaggcgtcaagggcgacaagggt
gaccgtggcgattcgtaccgcaaaatgcgacgcaggcaggacgatggcatgtccgatgcc
ccgcacatgccggcaattgaatatctttacggaccacctggtcctcccggtcccatgggc
ccgcccggacacactggcccacagggcgagcgcggcctggacggacgcaagggcgatcct
ggcgagaagggacacaagggcgatcaaggacccatgggcttacccggcccaatgggcatg
cgtggcgaatcgggaccctccggtccggcgggcaaggctggcattccgggtccgcctggc
ttggatggcatgaagggcgctcagggcgagacgggacacaagggcgagcgcggtgatcca
ggattgccgggcaccgacggcatacccggacaggagggcccgcgtggcgagcagggctca
cgcggcgatgctgggccgccgggtaagcgcggacggaaaggagatcgcggcgacaagggc
gagcagggcgtgcccggactggatgcgccctgtccgctgggcgtcgacggactgccgttg
cctggctgcggctggcgtccgccaaaggagcctatcgtctcaacgcccatgcacaaggat
tacttgccggatgtgacgcagccggagagcaatgccagcgactacgagcaggaggacgag
gacgaggaggaccagccggaggataatgaaaacgaatatgatgaatatcaggagcatttg
cataacaatgactaa
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