Drosophila navojoa: 115562505
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Entry
115562505 CDS
T05898
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
dnv
Drosophila navojoa
Pathway
dnv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115562505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnv03019
]
115562505
Messenger RNA biogenesis [BR:
dnv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115562505
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
115562505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
115562505
NCBI-ProteinID:
XP_030240024
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MTENSENMDTLSQNEDDMLICLPGDRLCRVEDNIVVGQGTYEQGGYIYASKSGIIDIDES
NEKCQIVSVHKPGFHLTIPVTGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKE
DVRETDKDRVDIYKSFKPGDVILARVVNQMEQSFLLSTAEAELGVVVAYASDYRKNRIPM
VPIGWSEMQCPQTTVKEPRKVAKVLPESSIKSEK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatagtgaaaatatggatacgttatctcaaaatgaggatgatatgctcatt
tgcctgcctggagatcgtctgtgtcgcgtggaggataacatcgttgtaggtcaaggcact
tacgaacaaggaggctatatttatgccagcaaatcgggaattatcgatattgacgaatca
aatgaaaaatgccaaattgtaagtgtacacaagcctggcttccatttgaccattccggta
accggagatgttgtcacagctcgggttctagtgacgacaccaaagttcgccaagtgtgcg
atattttgcgtaaggaacgtgttactcgagagcagttaccgcggtcttctgcgtaaggag
gatgtgcgcgaaacggataaggatcgtgttgatatttacaagtcattcaagcccggcgat
gttatattggcgcgcgttgtcaaccaaatggagcaatcctttttgttaagcacagcggag
gcagagctcggcgtggtggtggcctatgcaagtgattatcggaagaatcgaattcccatg
gtgcccattggttggagcgaaatgcagtgtccacaaacgacggttaaggagccaagaaag
gtggcaaaagtattgcccgagagttcaattaagtctgaaaaataa
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integrated database retrieval system