Drosophila navojoa: 115563917
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Entry
115563917 CDS
T05898
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
dnv
Drosophila navojoa
Pathway
dnv03440
Homologous recombination
dnv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115563917
03460 Fanconi anemia pathway
115563917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dnv03032
]
115563917
03400 DNA repair and recombination proteins [BR:
dnv03400
]
115563917
Enzymes [BR:
dnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
115563917
DNA replication proteins [BR:
dnv03032
]
Eukaryotic type
DNA Topoisomerases
115563917
DNA repair and recombination proteins [BR:
dnv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
115563917
FA (Fanconi anemia) pathway
115563917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
115563917
NCBI-ProteinID:
XP_030243488
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MLVNALKCLHLVKNARSYSKQPKDMKFLNVAEKNDAAKTIAGLLSNGAAQRREGYSVYNK
VYDFEAPVRGRNAKMVMTSVSGHLMELEFLQSYRNWRNVDPRSLFDAPIRKTVSENFLPI
KRTLEREVRSCQGLIIWTDCDREGENIGYEIIEVCRAIKPNLTVHRASFSEITSVAVRRA
LQQLGLPDKRQSDAVDVRTELDLRTGAAITRFQTMRLQRLFPANIADKLISYGSCQIPTL
GFVAERYKEIEAFVSEPFWKIRVLHSIEDLTVEFNWARNRLFDKEACENYLVLCLAEPEP
RATVESVVVKPKHKWRPTPLDTVEMEKMGSRKLKLSAKETMTIAEKLYSKGFISYPRTET
NQFSKEFELAPLVEQQTGHEAWGAFAQRVLEWGPSPRNGNKSDQAHPPIHPTKLVSNLQG
NEARVYELVVRHFLACISKDAVGSETIVSIDIAGEKFSANGLVIHERNYLDVYVYDKWSA
KQIHNYQQGQRFEPTEIMLHEGATTAPPLLTEADLIALMEKHGIGTDATHAEHINTIKER
GYIGVVEKGALVPGVIGMGLYEGYDAMELTLAKPLLRAEFEADLKRICLGEKDPKQVLRE
QIAKYKTAYQQIMDKITAMDDKIAQRINETPTVAAVNPSSGLVQELFQCPKCEQAPLALK
PKKNQTSFFIGCLNFPDCKNVIWLPEECKELTVLEECCATCGDGYKMLKFKLSTAYYRGL
FNTPHGWYKNCLRCDELFRNTFNINIDQVKRVGGIVGQAGSSGPGPGPGGGGGGGGKTCG
GPGRSLGTHPVSGNSSGSASNRGLQKPAKPKRNTKTTTRGSSDINKANVAAPTTASGGIR
SFFTHTNSRDVASLDGFFDSDNDGFDEQLLAAAAVAESESAVASQLDEDIAAAFAADDDA
DFESLLAESNNSNSRNDNTLAVNLDSSLTQWMRKAYEAEEAPMLWGRQARAAAEAQPTVK
RARINEASAAGAPAAVLCTGCHQPARQLTVLRDGPNKGRHYYKCPKPNECKFFQWAEQQP
TAAVTVTSTDNRGKGAGQETNSSSSWSTSAVDKEERRDSQENLSWGTKGATNRNSQNSND
SSWGSSGTLEQGRTRSPTIFRWGTENAAQAASTNGNSRSSWGTNPATQQRTSVQLTNARS
SSGWSRDSRDWNRGNSSNQTTSTFNHSNNSYQSSHIRSNSSSTVTINQRLATDGSTKCNC
DKPASSLIVRKDGPNKGRPFFACANREKSCGFFQWGDSNEQAASSSKSGAGAVASTGNRT
RRCGLCREEGHTRQKCPRKQDFDY
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcaatgcattaaaatgtttacatttagtaaaaaatgcacgttcctatagtaag
caaccgaaggatatgaagtttttaaatgtggcggaaaagaatgatgcggccaaaacaatt
gcgggcctactttcaaatggcgctgcgcagcggcgcgaaggctattcggtgtacaataag
gtgtacgattttgaggctccagtacgcggccggaatgccaaaatggttatgacttccgtt
tcgggacatctgatggaacttgagtttcttcaatcgtatcgaaattggcgaaatgtcgat
ccacgctcactttttgatgcacccatacgtaagaccgtcagcgaaaactttctacccatt
aagcgaacgttggaacgtgaggtgcgtagttgtcaggggttgataatctggacggattgc
gatcgcgaaggcgaaaacattggctatgaaatcattgaagtatgtcgcgccatcaaaccc
aatttgaccgttcaccgtgccagtttctcagagattacctcagttgcagtccgtcgcgct
ttgcagcaactgggtctgccagacaaacgacagagcgatgccgtggatgtgcgcaccgag
cttgatttgcgaactggcgcagccattacacgtttccaaacaatgcgactacagcgttta
ttccctgccaatattgcagacaagctcatttcgtatggcagctgccaaatacccacattg
ggcttcgtagcagagcgctacaaggaaattgaagcctttgtctccgagcccttctggaaa
ataagggtgctgcactccattgaagatctcacagtggagttcaattgggcacgcaatcgt
ttgtttgacaaagaggcatgtgagaactatttagtactctgcctggcagagccagagccg
cgagccactgttgaaagcgttgtagtgaagccgaaacataagtggcgacccacgcctttg
gatactgtggaaatggaaaagatgggctctcgcaaactgaagctatctgccaaggaaacg
atgaccatagccgaaaaactctatagcaagggttttataagttacccacgtaccgagact
aaccaattctctaaggaatttgaattggcaccccttgtggaacagcaaacgggacacgag
gcgtggggtgcattcgctcaacgtgtcctcgagtggggacctagtccaaggaacggaaac
aaatccgatcaagcgcatcctcctatccaccccactaagcttgtctcaaatctgcagggt
aacgaggcgcgcgtatatgagctggtcgtgcgacattttcttgcatgcatcagcaaagat
gcagttggctcggagacaattgtcagcattgatatagccggggagaagtttagcgccaat
gggttggttatacacgaaaggaactatttggacgtttatgtgtatgataagtggagtgcg
aagcagattcacaactatcagcagggtcaacggtttgagccgacggagattatgctgcat
gagggagcaactactgcgcctccgctgcttacagaagctgatttgatcgcgttgatggag
aagcacggaatcggcactgatgcaacacatgctgagcacatcaacacgatcaaggaacgt
ggttatataggcgtggtggagaaaggagctctagtgccaggtgttattggcatgggcttg
tacgagggctatgatgccatggagttgactttggcgaagccgctgctgcgagctgaattc
gaagctgatctgaaacgcatttgccttggtgaaaaggacccaaagcaggtgctgcgcgag
caaatagctaaatataaaacagcttaccagcagattatggacaagatcacagccatggat
gacaaaatagcgcagaggattaacgaaacgccaacggtcgccgccgtgaacccgtcaagt
ggtttggtgcaagagctcttccagtgccctaaatgcgagcaagcaccgcttgccttaaaa
cccaaaaagaatcagacaagctttttcattggttgtcttaatttcccggactgcaaaaat
gtcatttggctaccggaggagtgcaaggagttaaccgtgctggaggaatgctgcgccacc
tgtggcgatggttataaaatgctaaaatttaagctaagcaccgcctactatcgcggttta
ttcaatacaccccacggatggtacaagaattgcttacgctgtgatgaattgtttagaaac
accttcaacatcaatatagaccaggtaaagcgcgtgggcggaatagtgggacaggcggga
agctcaggaccaggaccagggccgggaggtggtggtggcggtggagggaaaacctgcggt
ggacccggtcgcagtttaggtacacatccggtaagtggcaattcatcgggctcagcaagt
aatagaggcttacaaaagccagcgaagccaaagcggaacaccaaaacaacaactagagga
tcatcagatatcaataaggcgaatgttgcagcaccaacaacagcatcaggtggcataaga
agcttcttcactcacaccaatagtcgggacgttgcaagtctagatggtttctttgacagt
gacaacgatggattcgatgagcagctgctggcagctgcagctgtagcagaatcagaatcc
gcggtagcttctcagctggatgaggatattgcggcagcatttgctgctgatgatgatgcg
gactttgagtcgttgctggctgaaagcaacaacagcaacagcagaaatgataacacattg
gcagttaatttagatagtagcctgacgcaatggatgcgtaaggcttacgaggccgaggag
gcgcccatgctgtggggcaggcaggcacgcgctgcagccgaagcgcagccaacagtgaag
cgagcgcgaataaatgaagcttctgccgctggagctccagctgcggtgctttgcactggc
tgccatcagcctgctcgccagcttactgtgctgcgcgatgggcccaacaagggccggcat
tactacaaatgccccaagccaaatgagtgtaaattctttcagtgggccgagcagcagcca
acagcagcagttaccgtcacaagcaccgacaatcggggcaagggagctgggcaagaaacc
aatagctcatccagttggagcacatcagcagttgacaaggaggaaaggcgcgattcccaa
gaaaatctctcatggggcacaaagggagcaacgaaccggaactctcaaaattccaatgat
tcgagttggggtagttctgggaccctggagcaaggcagaaccagatcgccgacaatcttt
agatggggcacggaaaatgctgcccaagcagcatcaacaaatggcaacagcagatctagc
tggggcacaaatccagctacgcagcaaaggacaagcgtccagctaactaatgcgcgcagc
tcttcaggttggagtagagacagcagggattggaatcgtggcaacagcagcaaccaaacc
acctccacatttaatcacagtaacaacagctaccagagctcacacatccggtcgaattcc
agtagcactgtgaccataaatcaacgactcgctaccgatggcagcactaaatgcaattgc
gacaagcccgctagcagtctgatcgtccgcaaggatggacccaataagggacgacccttt
tttgcatgcgcgaatcgcgaaaagtcctgcggtttttttcaatggggcgattcgaatgag
caggcagctagctcatcaaaatctggtgcaggagcagtggcctcaactgggaatcggacg
cgtcggtgcggtctatgtcgcgaggaaggacacacccgccaaaagtgtcctcgtaaacag
gattttgactattga
DBGET
integrated database retrieval system
