Drosophila navojoa: 115564013
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Entry
115564013 CDS
T05898
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
dnv
Drosophila navojoa
Pathway
dnv03020
RNA polymerase
dnv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115564013
09124 Replication and repair
03420 Nucleotide excision repair
115564013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnv03021
]
115564013
03400 DNA repair and recombination proteins [BR:
dnv03400
]
115564013
Enzymes [BR:
dnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115564013
Transcription machinery [BR:
dnv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115564013
DNA repair and recombination proteins [BR:
dnv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115564013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
115564013
NCBI-ProteinID:
XP_030243676
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYDNEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGMEPLETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGTLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgataatgaagaagagaatttcgatgaagaaaatgcagaggaaatctctcac
gagctgtggcaggaggcctgctggatcgtgatcaacgcctattttgacgagaaaggcctt
gtgcgtcagcagctggacagcttcgatgagttcatacaaatgtctgtgcagcgcattgtt
gaggactcgccggccattgagctgcaggctgaggcccagcatacatccggcgaagtggaa
acacctccccgattttccctaaaattcgaacagatttacctgtccaagccgacgcattgg
gaaaaggatggctcacccagtcctatgatgcccaacgaggcgcgcttgcgcaatttgacc
tactcagctccgctatatgtggatattacaaagacaaagaatgtcgagggcatggagccc
ctggagacgcaacatcagaaaaccttcattggcaaaattcccatcatgttgagatcaaca
tattgtctgctctcccaactcaccgatcgtgatttgactgagcttaacgagtgcccgcta
gatccgggtggctacttcatcataaacggctcggagaaagtgctcatcgctcaggagaag
atggccacgaacacggtgtacgtattcagcatgaaggacggcaagtacgcctttaaaacg
gagatacgctcctgcctggagcacagctcgcgtcccacctccacgctctgggtgaacatg
atggcgcgtggctcgcaaaacatcaagaaatcggcgattggacagcggatcattgccatt
ctcccgtacattaagcaagagatacccattatgatagtttttcgtgccctgggatttgtg
gctgatcgcgatattttagagcacattatatacgactttgacgatccagagatgatggag
atggtgaagccctctctagacgaagctttcgtggtgcaggagcagaatgtggccctcaat
ttcatcggcgctcgcggcgcacgccccggcgttaccaaggacaagcgtataaagtatgcc
aaggaaattctgcagaaggaaatgttgccgcacgttggcgtctctgacttttgcgagaca
aagaaggcatattttctaggctatatggtgcatcgcttgctgctggcctcgctgggtcgc
cgagagctcgacgatcgtgatcactatggcaacaagcgcctggatcttgctggtcctctg
ctggccttcctcttccgtggcctcttcaagaacttgatgaaggaggtgcgcatgtacaca
cagaagttcattgaccgcggcaaggacttcaatttggagctggccataaaaacaaatatt
atcactgacggcctgcgctactcgctggctaccggcaactggggcgatcagaagaaggcg
catcaggctcgcgccggcgtctcgcaggtgttgaatcgtctcacattcgcttccacattg
tcccatctgcgtcgcgtaaactcgcccattggacgcgacggcaagctggccaagccacgt
caattgcataacacactgtggggcatgttgtgcccggcagagacgcctgagggcgcagct
gtgggcttggtaaagaatctggcactgatggcctacatatctgtgggctcacagccgtcg
ccgattctggagttcttggaagagtggtccatggagaatctggaggaaatcgcgccctcc
gcgattgcagatgctaccaaaatcttcgtgaatggctgttgggtgggcatacatcgagat
cccgagcaattgatggccaccctccgtaagctgcgccgtcagatggacatcattgtatca
gaggtgtccatgattcgcgacattcgcgatcgtgagatccgaatctacacagatgcgggt
cgcatatgtagacctctgcttattgtcgagaatggcacgctgctgttgaagaagacccac
gtggagatgttaaaggagcgagactacaacaactacagctggcaggtgctggttgcttcc
ggtgtcgttgaatacattgacacactcgaggaggagacggtcatgattgccatgtcgccc
tacgatctcaagcaggacaaggactacgcctattgtaccacgtacactcactgtgaaatt
catccggccatgatattgggtgtttgtgcttctattattcccttccccgatcacaaccag
agtccacgtaacacctatcaaagtgctatgggtaagcaggctatgggtgtttatataacc
aacttccacgtacgtatggacaccttggcgcacgtactgtattatcccatgaagccattg
gtgacgacgcgatccatggagtatctgcgtttccgtgagctgcctgccggcatcaattcc
attgtggctattttgtgctacactggctacaaccaggaggattccgttatcctgaacgcc
tcagctgtggagcgtggcttcttccggtcggtgttctatcgatcgtacaaggatgcggag
aacaaacgcgtgggtgatcaagaggagaactttgagaaaccgcatcgcggcacctgccaa
ggcatgcgaaatgctcattatgacaaactggacgatgatggcatcattgcgcctggcatt
cgcgtctctggcgacgatgtcgtcattggcaagacaattacgctgcccgagaacgacgat
gaactggacagcaatacaaagcgattcgccaagcgcgatgcctccacatttttgcgtaac
tctgagacgggcattgtggatcaagttatgctgacactaaacagcgagggctacaagttc
tgcaagattcgtgtgcgttccgtgcgcataccacagattggcgacaagttcgcctctcgt
cacggacagaagggtacatgcggcatccagtatcgacaggaggacatgccgttcacctgc
gaggggctagcgccagatattatcatcaatccccacgccattccctctcgtatgacaatt
ggccatttgatcgagtgtctgcagggaaagcttggctccaataagggcgaaatcggcgac
gccacgcccttcaacgatgccgtcaacgtacaaaagatttctactttccttcaggagtac
ggctaccatctgcgtggcaatgaggtcatgtacaatggacacactggacggaaaatcaat
gctcaggtgtttttgggcccaacctactatcagcgtctcaagcacatggtggacgacaaa
attcactcacgtgcccgtggtccagtgcagatccttgtgcgccagcctatggagggcaga
gctcgtgacggcggcttgcgtttcggcgagatggagcgtgactgtcaaatctctcacggc
gccgctcagttcctgcgcgaacgactgttcgaagtgtccgatccgtatcgcgtgcacatt
tgcaacttttgcggcctgattgccattgccaatctgcgcaacaatacgttcgagtgcaaa
ggctgcaagaacaagacgcagatctcgcaggtgcgactgccgtacgcggccaagctgctc
ttccaggagctcatgtccatgaacatagcgccgcgcctgatggttagctga
DBGET
integrated database retrieval system
