Drosophila navojoa: 115564115
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Entry
115564115 CDS
T05898
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dnv
Drosophila navojoa
Pathway
dnv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dnv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115564115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnv03021
]
115564115
Enzymes [BR:
dnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115564115
Transcription machinery [BR:
dnv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115564115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
115564115
NCBI-ProteinID:
XP_030243911
LinkDB
All DBs
Position
Unknown
AA seq
1628 aa
AA seq
DB search
MGARRPPEVHMFPSDLEFAVFTPEEIRKLSVVKIITGLLFDGLGHPIPGGLYDIRLGSYG
RCMDPCGTCLKMQDCPGHMGHIELGSLVYNPFFIKLVQRLLCIFCLHCHKLQMRDHESEI
IMLQLRLIDAGYIIEAQELELFKSEVVCQNTDEMVKLDNGDAVHPRIAAVKELLAKNVSN
ATNTTKTSCSLRTAITHAALQRGSSKKCRHCNKSMRFVRYLHRRLVYYVTIADMKERIGD
VPESSGQNKVIFADECRRYLRKIYENYPELLKLLVPVLNLNRSDSSPSDDYSPVDIFFMD
TIPVTPPRVRPMNVINDMLKGNPQTSIYVNIIQNNHVLNVILKFMKGQQDKLSAEAKAAY
QNMRGANDHEKLYNAWLSLQSSVDVLLDVNMSRDIKSAEGLKQVLEKKEGLIRKHMMGKR
VNYAARTVITPDPNIDVDEIGIPDIFARKLSYPVPVTEWNVIELRKMVMNGPDVHPGANY
IQDSKGLTTYIPADNAAKRASMAKLLLSNPKDGVKIVHRHVLNGDVLLLNRQPSLHKPSI
MAHKARILHGEKTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARAEAYNLVNVASNYLVP
KDGTPLGGLIQDQVISGVKLSIRGRFFNREDYQQLVFQGLSHVKGDVKLLPPAILKPAVL
WSGKQVLSTIIINLIPDGYERINLDSFAKIGGKNWKVARSRRPLCGSTPQEQELSESQVQ
IRNGELLVGVLDKQQYGATTFGLIHCMYELYGGDVSTRLLTAFTKVFTFFLQLEGFTLGV
KDILVTEEADRKRRKIINECRDVGNSAVAAALELDDVPPHDELAEQMEAAYVKDAKFRVL
LDRKYKSMLDGYTNDINKACLPGGLISKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIE
LEGKRPPLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAV
KTSRSGYLQRCLIKHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLDILKAKFFNGEFCADF
LTQNAKAVLRPSQLQLMKDEECLAKVKRHEKHIRSWQKKKPAKLYAAFTHFSKELRNDVE
VDRPNEINTKTGRRRFDEGLLKLWKKADPEDKALYRKKYARCPDPTVAVYKQDNYYGSVS
ERTRQLIDEYATKHPKQKHIISDIMHMKTIKALASPGEPVGLIAAQSIGEPSTQMTLNTF
HFAGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIKPGQQLNAEKLRISLNCVTLASL
LECKFYQKKIXTSXXXXRPKRIIKYMHQTFFKQLIRAILKVSNAKKTSKIVVVDEKKEGG
NRQDEDNDQELDVADDVGAQRVADNDDDSSDDGGDDDATGIKLKQRKTDENDYDDPDDVE
EIIDANDDEDEHDEEDGDGNEQANEENNEVDDKSVEKLLSNQMVQDYTYDKDQHLWCRVK
LNLSVRYQKPDLTSIIRELAAKSIVHQVPHIKRAIIYKGNDDEQLLKTDGINIGEMFQHN
KILDLNRLYSNDIHAIARTYGIEAATQVIVKEVSNVFKVYGITVDRRHLSLIADYMTFDG
TFQPLSRRGMEHSSSPLQQMSFESSLQFLRSAAGFGRPDELNSPSSRLMVGLPVRNGTGA
FELLTRIC
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaagaagaccgccagaagtgcacatgtttccttcggacctggagttcgctgtg
ttcacacccgaggagatacggaaattgagcgtggttaaaataatcactggcctcctattc
gatggactgggacatccaatacccggtggcctatacgacatacgattgggctcctatggc
cgctgcatggatccctgcggcacatgtttaaaaatgcaagattgtcccggccacatgggt
cacattgaactgggctcactggtttacaatccgttcttcattaaactggtgcagcgttta
ttatgcatcttctgtctgcactgtcacaagctgcaaatgagagatcatgaaagcgagatt
atcatgcttcagttgcggctgattgacgctggctatattattgaagcgcaagaactggaa
ctatttaaatcagaagttgtttgccaaaacacagatgagatggtgaaactggacaacggc
gatgccgtacatccgcgcatcgcagcggtcaaggagctgttggccaagaatgtgagcaat
gccaccaatactaccaaaacaagctgctccctgcgcacagccattacgcatgctgctctg
caacgtggctccagcaaaaagtgccggcactgcaacaagtccatgcgctttgtgcgctat
ttgcatcgccgtcttgtctactatgtgactattgctgatatgaaggagcggataggcgat
gtgcccgagagcagtggccagaacaaggttatatttgcggatgaatgccgtcgctatctg
cgaaagatctatgaaaactatccggaattgcttaagctgctcgtaccggtgctaaacctg
aacaggagcgactcaagccccagtgatgattactcgcccgttgacatatttttcatggat
acgataccagttacaccgccgcgtgtccgtccaatgaacgtcattaacgacatgttaaag
gggaatccgcagacgagcatctatgtaaacataatccagaacaatcatgtcctcaatgtg
attctcaagtttatgaagggacagcaggacaaattgagtgccgaagctaaagcagcctat
caaaacatgcgcggcgctaacgatcacgagaagctctataatgcatggctttcgttgcag
agctcggtggatgtgttgctcgacgtcaacatgtcgcgcgacatcaagtccgccgagggc
cttaagcaagtgctagaaaagaaggagggtctcatacgtaagcatatgatgggtaagcgc
gtcaattacgccgcacgtaccgtcatcacgcccgatccaaatatcgatgtggatgagatc
ggtataccggacatatttgcgcgtaagctctcctatccggtgccggttaccgaatggaat
gttattgagttgcgcaaaatggtgatgaatggaccagatgttcatccgggcgccaactac
atacaagacagcaagggcttgaccacctacatacccgccgacaatgcggcaaagcgcgcc
agcatggctaaactgttgctgtctaatcccaaggatggcgtgaagattgtccatcgccac
gtcctaaatggtgacgtgctgctgctcaatcgtcagccttcgctgcacaagccatcaatt
atggcgcataaggcccgcatattgcatggcgagaagacttttcgccttcactactccaat
tgtaaggcctacaatgctgatttcgatggtgacgagatgaatgcgcactatccccaaagc
gaagtagcccgcgctgaagcctacaaccttgtgaacgtggccagcaactacctggtgccc
aaggacggcactccactaggaggccttattcaggatcaggttatttcaggcgtgaaactg
tccatacgcggtcgcttcttcaaccgtgaagattatcagcagttggtcttccagggcctg
tcgcatgttaagggcgatgtcaagttactgccaccggctatattgaagcctgccgtattg
tggtctggaaagcaagtgctttcaaccataatcattaatctgataccggatggatatgag
cgcatcaacttggattcctttgccaaaatcggcggcaagaactggaaggtggccaggtcg
cgaaggcctttgtgtggctccactccgcaggagcaagagttaagtgagagtcaagtgcaa
attcgaaacggcgaacttcttgtgggcgtgctcgacaagcagcagtatggcgctaccaca
tttggtctgatccactgcatgtacgagctgtatggcggtgacgtgtccacgcgtctgctc
accgccttcacaaaggtgttcaccttcttcctgcagctcgagggcttcacgttgggcgtc
aaagatattttggtaactgaagaggctgatcgcaagcgtcgcaagatcatcaacgagtgc
cgcgatgtgggcaatagcgctgttgctgctgccctggagttggacgatgtgccgccgcac
gatgagctggccgaacaaatggaggctgcatatgtcaaggatgcgaaattccgagttctg
ctcgatcgcaaatacaaatctatgttagatggctacacaaatgacattaacaaagcttgt
ctgcctggagggctcatcagcaagtttccatcaaacaatctgcaactgatggttctatcg
ggcgcgaaaggatcaatggttaacaccatgcaaatctcttgcctgctaggtcaaatagag
ttggaaggtaaacgacctccgttgatgatttctggcaaatctctgcccagttttacctca
tttgagacatcgccgaaatcgggcggatttattgatggccgctttatgacaggaatacag
ccgcaggactttttctttcactgcatggctggtcgtgaaggtctcatcgatacagctgtg
aaaacatcccgttccggttatctgcagcgctgtttaatcaagcacctggaggggttgagc
gtacattatgatctgactgtgcgcgatagtgacaacagtgtggtgcagtttctatacggc
gaggatggtttggacatactaaaggccaagttctttaacggagagttctgcgctgacttc
cttacacaaaacgctaaggccgtgttgcggcccagccagctgcagctgatgaaggatgaa
gagtgcctcgccaaagtgaagcggcacgagaagcacattagaagctggcagaagaagaag
ccagccaaattgtatgcggcattcactcacttttcgaaggagcttcgtaacgatgtggaa
gttgaccgaccgaatgagataaataccaagacgggacgcaggcggtttgacgaagggctg
cttaaactgtggaagaaggcggatcctgaagacaaggctctgtatcgcaagaagtatgca
cgctgtcccgatcctacagttgccgtttacaaacaagacaattactatggatcagtttcg
gagcgcacgcgtcagttaatcgacgagtatgcaaccaagcatccaaaacaaaagcatatc
atttctgacattatgcacatgaagaccataaaggcgctagcgtcgccaggcgaaccggtg
ggtctgattgcagctcagtcgattggcgagccgtccacccagatgacattgaatactttc
cattttgctggccgtggtgaaatgaacgtcactctgggtataccgcgccttcgcgaaatt
ctaatgttggcctcctcaaatatcaagaccccttcaatggatataccaatcaagccgggg
cagcaactcaatgcagagaaactgcgcatttcgctcaactgtgtgactctagccagtctg
ctggaatgtaagttttatcaaaaaaaaattngaacaagtgannnnnnnnnnaggcctaag
cgtattatcaaatacatgcatcagacgttcttcaagcagctcattcgtgctattctgaag
gtctccaatgccaagaagacttcaaaaatcgtggtggtagatgagaagaaggagggtggc
aacagacaggacgaggacaatgatcaagagttggatgttgctgatgatgttggtgcacag
agagtagcagacaatgatgacgattcttcggatgatggaggtgacgatgatgcaactggt
attaagcttaagcagcgtaagaccgacgaaaatgactatgacgatccggatgatgtcgaa
gaaattatagatgccaatgatgacgaggacgagcacgatgaagaggatggagacggaaat
gaacaagcaaatgaagaaaataatgaagtcgatgacaagtcggtggaaaagctacttagc
aatcaaatggtacaggattatacctacgacaaagatcagcatctttggtgccgagtaaag
cttaacctcagtgtgcgctaccagaagcctgatctgacgtctattatacgcgaattggcc
gctaagagtattgtacatcaggtgccgcatataaagcgcgctatcatctacaagggcaac
gacgatgagcaactgttgaaaaccgatggcattaacattggtgaaatgttccagcacaac
aaaatcttggatcttaatcgtttgtattccaacgatattcatgctatagcacgcacatat
ggcatcgaagctgcaacccaggtcattgtcaaagaagttagcaatgtgttcaaggtttat
ggaattacggtcgatcgcaggcatttgtcactgatcgccgactatatgacctttgatggc
actttccagccgctctcacgtagaggcatggaacactcttcatcgccgctacagcaaatg
tcctttgagtcgagcttgcagttcctgcgcagcgcagctggctttggtcgccctgacgag
ctaaattcaccgtcgagtcgtctaatggttggcttacctgtgcgaaacggcactggtgcc
tttgaattgttaaccagaatatgctaa
DBGET
integrated database retrieval system
