KEGG   Drosophila navojoa: 115565354
Entry
115565354         CDS       T05898                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dnv  Drosophila navojoa
Pathway
dnv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dnv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115565354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dnv03021]
    115565354
   03036 Chromosome and associated proteins [BR:dnv03036]
    115565354
Transcription machinery [BR:dnv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115565354
   Coactivators
    SAGA/TFTC/STAGA complex
     115565354
Chromosome and associated proteins [BR:dnv03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115565354
    STAGA complex
     115565354
    TFTC complex
     115565354
    SAGA complex
     115565354
    SLIK complex
     115565354
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 TFIID_NTD2 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD_LRWD1 WD40_like Beta-prop_NWD2_C PROPPIN
Other DBs
NCBI-GeneID: 115565354
NCBI-ProteinID: XP_030246336
LinkDB
Position
Unknown
AA seq 711 aa
MNLDVANVNGGNGNDNSQHSQDKRELLCLLKLLKKYQLKGTEELLCREANVNSADLSKID
DDDVKTVLNAALSFTEENLNRQAASAASAAAAQSNESKAATETNAAEALAKFIGDDAFDA
QQYEQAYEELRTFVEESLDIYKHELSMVLYPILVQIYFKILASGQVEKARGFIEKYKSDL
DGYYIEGLFNLLLISKPEELLDNDLVNAMETDKFVIRMSRDAHSLFKRHIQDRRQEVVAD
IVSKYLHFDTYEGMARNKLQCVATAGSHTGDAKRQDNKIRVYYGLLKEVDFQTLTTPAPA
PEEEDDDPDAPDRPKKKKPKKDPLLSKKSKSDPNAPAIDRIPLPELKDADKLLKLKALRE
ASKRLPLNKDQLPSAVFYTILNSMQGVTCAEISDDSTMLACGFADSMVRIWSLTPAKLRA
LKDAEALRELDKESSDINARMLDERSGEMTRSFLGHTGPVYRCAFAPEMNLLLSCSEDST
IRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQSLRVFVGH
LSGVDCVQFHPNSNYVATGSSDRTVRLWDVLTGQSVRLMTGHKGTVSSLAFSTCGRYLAS
GSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTLLAAGGLDNNLTLWDFHKLTDD
YLSNQITVSHHQDENDEDVYLLRTFPSKNSPFLTLHFTRRNLLMCVGLFKS
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgaatttagacgtagcaaacgtaaatggcggcaatggcaatgataactcacaacattca
caggacaagcgcgaactactctgtttgcttaaactcctgaaaaaataccaattaaaagga
acagaggagctgctctgccgggaggcaaatgtgaacagcgcagatttgtcaaaaattgac
gatgacgatgttaagacggtgcttaacgccgcgctgtcgttcactgaggagaatctcaat
cgtcaggcagcgtcggcagcgtcggcagcagcagcacaatccaacgaatcgaaggcggcc
acggaaaccaacgccgccgaggcgctggcaaaattcattggcgacgatgccttcgatgcc
caacagtacgagcaggcgtacgaagaactgcgaacatttgtggaggaatctttggacatc
tataagcacgaattgtccatggtgctctacccaatactggtgcagatctactttaaaatt
ctagccagtgggcaggtagaaaaggcgcgtggatttattgagaaatataagtctgatctc
gatgggtattatatagaaggcctcttcaacttgttgctgatatccaagcccgaggagctg
ctcgacaacgatcttgtgaatgccatggagaccgacaagttcgtgatacgcatgtcccgg
gatgcccattccctgtttaagcgccacattcaggatcggaggcaagaggttgtggccgat
atcgtatccaagtatctgcactttgacacctacgagggcatggctcggaacaagctgcag
tgcgtggcaacggcgggctcccacactggcgatgcaaagcgtcaggacaacaaaatccgc
gtctactacggattgctcaaggaagtggactttcagacgctgaccacgcccgcaccagcg
cccgaagaagaggacgacgatccggatgcaccagatcgacccaaaaagaagaagcccaaa
aaagatccgctgctgtcgaagaaatcgaaatccgatcccaatgccccggccatagatcgc
atccctctgccggagctaaaggatgcggacaaattactcaagctcaaggcgttgcgcgag
gccagcaaacgtctgccgctgaacaaggatcaactgccctctgccgtattctatacaata
cttaattccatgcagggcgtcacctgtgccgagatttcggatgactctacaatgctcgcc
tgtggcttcgcggattccatggtgcgcatttggtcattgacgccagccaagctgcgtgct
ttaaaagacgccgaggcgctacgcgaactggacaaggaatcatcggatatcaatgcccgt
atgctggacgagcgcagcggagagatgacgcgctccttcctgggccacacgggtcccgtc
tatcgttgcgcatttgcgcctgagatgaatctgttgctctcttgctcggaggacagcacc
attcggctgtggtcactgctaacctggtcctgtgtggtcacctatcgcggccatgtctac
ccggtgtgggatgttcgctttgcgccgcatggctattattttgtatcgtgctcgtatgac
aaaaccgctcggctctgggccacggactcgaatcagtcgctgcgcgtatttgtcggacat
ttatctggcgtggattgcgtgcaatttcatccgaattcgaattatgtggccaccggctct
agcgatcgcacggtgcgtctgtgggacgtgctgactggccaatccgtgcgcctgatgacc
ggacacaagggcaccgtcagctccctagccttctccacttgcggccgttacctggcctcc
ggttcggtcgatcacaacatcatcatctgggatctgtcgaatgggtcgctggtcactacg
ctgctgaggcacacgagcaccgtgaccacgattaccttcagccgggacggcactttgttg
gctgccggcggactggataacaacctgacgctgtgggacttccacaagctcaccgatgat
tacctgagcaatcagataaccgtgtcacaccatcaggacgagaacgatgaggatgtctat
ctgttgcgcacatttcccagcaagaattcgccgttcctcacgctgcacttcacgcgtcgc
aatctcctgatgtgcgttggtctcttcaagagttag

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