Diuraphis noxia (Russian wheat aphid): 107161408
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Entry
107161408 CDS
T04900
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03020
RNA polymerase
dnx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107161408
09124 Replication and repair
03420 Nucleotide excision repair
107161408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107161408
03400 DNA repair and recombination proteins [BR:
dnx03400
]
107161408
Enzymes [BR:
dnx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107161408
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107161408
DNA repair and recombination proteins [BR:
dnx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107161408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107161408
NCBI-ProteinID:
XP_015363289
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MAASDSKAPVRTVKRVQFGILSADECRRMSVTEGGIRFSETMEGGRPKLGGLMDPRQGVI
DRFSRCQTCAGNMTECCGHFGHIELAKPVFHIGFLTKAIKILRCVCFYCSKLLVSPTHPK
VKEIVMKSKGQQRKRLAFIYDLCKGKNICEGGDELDINKDNVNDANMPPKKQGHGGCGRY
QPTIRRIGLDLTAEWKHVNEDSQEKKIPLTAERVYEILKHITDEEVVIMGMDPKFARPDW
MILTVLPVPPLPVRPAIVMFGSMRNQDDLTHKLSDIIKCNNELIRNEQSGAATHIIAENI
RMLQYHVATLVDNDSPGLPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDEVGVPRTIAQNMTFPEIVTPFNIDQMLELVRRGNSQYPGAKYIIRDNGERI
DLRFHPKPSDLHLQCGYKVERHIKDGDLVVFNRQPTLHKMSMMGHRVRVLPWSTFRMNLS
CTSPYNADFDGDEMNLHVPQSMETRAEVENIHITPRQIITPQANKPVMGIVQDTLTAIRK
MTKRDVFIEKEQMMNLLMHLPIWDGKMPTPCILKPKPLWTGKQLFSLIIPGNVNMIRTHS
THPDEEDNGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGR
FYGNIQTVVNNWLLYEGHSIGIGDTIADPQTYLEIQRAIKKAKEDVIEVIQKAHNMDLEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNSLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGEAVEFQSIA
TIEPSHKKFENEFKFDISNERHMRKIFTEDVLKDMMGSNDTVAVLEKEWEQLTNDRDTLR
EIFPSGESKVVLPCNLKRMIWNVQKIFHINKRGPTDLNPVKVVNGVKKLLDKCVIVAGED
ELSKKANKNATLLFQCLVRSTLCTKLVSENFRLSSEAFEWLVGEIENRFKQAQAQPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIREDQEFVNVYYEMPDFDPTRI
SPWLLRIELDRKRMTDKKLTMEAISEKINAGFGDDLNCIFNDDNADKLILRIRIMNGEDG
KMNGGDDEDTVDKMEDDMFLRCIEANMLSDMTLQGIDSIGKVYMHLPQTDSKKRIIITET
GEFKAIADWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFSVLGIEAVRKSVEKEMNTV
LQFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASH
AEVDPMRGVSENIIMGQLPRMGTGCFDLLLDAEKAKDGIEIPMDNGYMGMGGGGMFMAAG
TPSMSPAMTPWDQTSTPIYQNSWSSSLETGMTPGGPGFSPAGSSEASGTSPFWMSSGGTP
GSPGSPSMATSPYVPSPSSMSPNYNYPSSPQFGSLSPSMTPTNYSPTSPQYSATQQNTPK
YSSMSPNYNYSPTSPSYSPTSPSYSHTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQY
AASSPSYTPSAASGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGG
TQYNQSYSPSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYSGPD
ES
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagcgattcaaaggctccagtccgaactgtcaaacgtgtgcagtttggtata
ttatctgcagacgaatgccgtcgcatgtctgtcaccgaagggggcattcgcttttcagaa
acgatggaaggtggacgccccaagcttggtgggctcatggacccccgtcaaggagttatt
gatcgtttctcaagatgtcaaacttgtgcaggtaacatgaccgaatgttgtggacatttt
ggccatattgaacttgctaaaccagtatttcatataggatttctaaccaaagccataaaa
attctacgttgtgtctgcttttactgttccaaattattagttagtcctactcatcccaaa
gtaaaagaaattgttatgaaatcaaaaggacaacagagaaaacgattagcttttatttat
gatttatgtaaaggaaaaaatatttgtgaaggaggtgatgaactggacatcaataaagat
aatgttaatgatgcaaatatgcctccaaagaaacaaggtcatggtggttgtggtcgttat
caaccaactataagacgtattggtttggatttaacagctgaatggaagcatgttaatgaa
gattctcaagagaaaaaaataccacttacagccgaaagagtctatgaaattttaaaacat
attactgatgaagaggttgtaattatgggcatggatcccaaatttgcacgtcctgattgg
atgatattgacagtgctacctgttcctcctttacctgtacgtccagcaattgttatgttt
ggatcaatgagaaatcaagatgatttgactcataaactgtctgatatcataaagtgtaat
aatgaattaattcgtaatgaacagtctggtgctgctactcatattatagctgaaaatatt
agaatgttacaatatcatgtagcaactttggttgataatgatagtcctggcctaccgaga
gcaatgcaaaaatctggcaagccgttaaaagcaattaaagctcgtttaaaaggcaaagaa
ggcagaatccgaggaaacttgatgggaaagcgtgtagatttttctgctcgaactgttata
acacctgatccaaatttacgaattgatgaagttggtgtacctcgtactattgctcaaaat
atgacctttccagagatcgttactccatttaacattgatcaaatgctggaattggttcgt
cgtggtaattcacaataccctggtgccaagtacattatacgtgataatggtgaaagaatt
gatttacgttttcatcctaaaccttcagatttacatttgcaatgtggttataaagttgaa
agacacataaaggatggcgatttagtagttttcaacagacagcctactttacacaaaatg
agtatgatgggtcacagagtgagagtcttaccttggtctacatttcgaatgaatttaagt
tgtacgtctccatataatgctgattttgatggtgatgaaatgaaccttcatgttccacaa
tctatggaaacaagagctgaagtagaaaatattcatattacaccaaggcaaattattact
ccccaagctaataaacctgttatgggaattgtacaagatacattgacagccatcaggaaa
atgacaaaaagagatgtatttattgagaaggaacaaatgatgaatttactaatgcatctt
cccatctgggatgggaaaatgccaactccttgtattttaaaaccaaaaccattgtggact
ggaaaacaactcttttctttaattatcccaggaaatgtcaatatgattcgaactcactcc
actcatccagatgaagaggataatggaccttacaaatggatatcgcctggtgatacaaag
gtaatggttgagcatggtgagttggtgatggggatattatgtaagaagacwttaggtaca
tcagctggatcattgcttcatatatgtatgttagaattgggacatgaagtatgtggacgg
ttctatggtaatattcagactgtagttaataactggcttttatatgaaggtcattctatt
ggtattggtgatactattgctgatcctcaaacttatttggagattcaaagagcaattaaa
aaagccaaagaagatgtaatagaggtgatacaaaaagcgcataatatggatcttgagcca
acaccaggtaacactctccgtcagacttttgaaaatcaagtaaacagaattttaaatgat
gctcgtgacaaaactggaggctctgctaaaaaatctttgactgaatacaatagtcttaaa
gctatggtagtttctggttccaaaggttcaaacattaatatttctcaggttatcgcttgt
gtaggtcaacaaaatgtagaaggtaaacgtataccatttggttttcgaaaacgtacatta
ccacattttattaaagatgattatggtccagaatcaagaggttttgtagaaaattcttat
ctggctggacttactccttctgagttctacttccatgctatgggaggkcgtgaaggtctt
attgatactgctgttaaaactgctgaaacaggttatatccaaagacgtttgatcaaagct
atggaatctgttatggttcactatgatggaactgtacgtaactctgttggtcaattgatt
cagttgcgttatggagaagatggtctttgtggagaggcagttgaattccagagtattgct
actatagaaccgtcacataagaaatttgaaaatgaatttaaatttgatatttcaaatgag
agacatatgagaaaaatattcactgaagatgttttaaaagatatgatgggtagtaatgat
actgtagctgtattagaaaaagaatgggaacaattaactaatgacagagatactctaaga
gaaatattcccwtcgggtgaaagcaaggtagtattaccttgtaatctgaaacgtatgatt
tggaatgttcagaaaatttttcacatcaataaacgaggaccaacagacttgaatcctgta
aaagttgtgaatggagtcaaaaaactattagacaaatgtgttatagtagctggggaagat
gagttaagcaagaaagctaataaaaatgctactttattatttcaatgtttggtgcgttct
actctgtgtactaaattagtttctgaaaatttccgcctctcttctgaagcatttgaatgg
ttagttggtgaaattgaaaacagatttaaacaagctcaggcacaacctggtgagatggtt
ggagcattagctgctcaaagtttaggagaacctgctactcaaatgacattgaatactttt
cattttgctggtgtatcttcaaaaaatgtaactctaggagtaccaagactaaaagaaatt
attaatataagtaagaagcccaaagcaccatcactaactgtgtttttgactggagcagct
gctagagatgcagaaaaggccaaaaacgtattatgtcggcttgagcatacaacattgcgt
aaagtcacagcaaacacagctatttattatgatcctgatcctcaaaatacagttattaga
gaagaccaagagtttgtaaatgtttattatgaaatgcctgattttgatcctacacgaatt
tctccatggttgttgcgaattgaattagatagaaaaagaatgactgataaaaaattgact
atggaagctatatctgaaaagatcaatgcaggatttggagatgacctcaattgtatattc
aatgatgacaacgctgacaagttaattttacgtatacgtataatgaatggtgaagatggt
aaaatgaatggtggtgatgatgaagatactgttgataaaatggaagatgatatgttcctg
agatgtattgaagctaacatgttatctgatatgactttacaaggtattgattctattgga
aaagtgtatatgcatttaccacaaacagattctaaaaaaagaataattattacggaaact
ggggaatttaaggcaattgctgattggttgttagaaactgatggtacaagtttgatgaaa
gtcttgagtgaaagagatgttgatcctgttagaacattctccaatgacatttgtgaaata
ttttcggttttgggtattgaagctgtacgtaagtcagttgaaaaagaaatgaatactgtg
ttgcagttctatggtttatacgtaaattatcgtcatttagcattattgtgtgatgttatg
acagccaaaggccatttaatggccattactagacatggtataaatagacaagatacagga
gcattaatgagatgctcgtttgaagaaacagtcgatgttttattagatgctgcttctcat
gctgaagttgaccctatgagaggtgtatctgaaaacattattatgggacaattgcctaga
atgggaacaggttgtttcgatttgcttttggatgctgaaaaagccaaagatggtatagaa
attccaatggataatggttatatgggtatgggtggcggtggcatgttcatggctgctggc
acgccttctatgtcaccagctatgactccatgggatcaaacatccacaccaatttatcaa
aatagttggtcttcaagcttggaaactggcatgactcctggaggacctggcttttcacca
gcaggttcaagtgaagctagtggaacttctccattctggatgtcatctggaggaactcca
ggcagtcctggatctccaagcatggccactagtccatatgtgcctagccctagttccatg
tcaccaaactataattatccttctagcccacagtttggttctttatcaccttctatgact
cctactaattattcaccaacaagtccacaatactctgctacccaacaaaatactccaaaa
tactcttcaatgtctcctaattacaattattccccaacaagcccatcatactcaccgact
agcccttcatactctcatacttcatattctccaacaagtccttcctacagcccaacatct
ccttcgtacagccctacatctccgtcttacagtccaacatctccatcgtatagtccaacg
tctccatcatatagcccaacatctccgtcatatagccctaccagtccgtcatatagccct
acgtctccatcttacagtccaacatcaccatcatacagtccaacttcaccatcgtacagc
cctacatcgccgtcgtacagtccaacatcaccttcttacagtccaagctctccacaatat
gcagcttcttcgccatcatatacacctagtgctgcatctgggacaagcaattacaaatat
tcacctacttcgccttcactggctgtcagtcctacatactcccctaccagtccaatgtac
tcgccttcaaatgcttcttattctccatcttctctacagcatacaccaaatgctggaggt
acacaatacaatcagtcatatagtccaagttcgcctgtttattcacctaccaatttctcc
atggcaagtccaaggtattctcctacttcgccaacttattcacctggtgttggaagtccg
cattattctccatcatcgccgagttattcgccaacgtctccaaattatagtggaccagat
gagtcttaa
DBGET
integrated database retrieval system
