Diuraphis noxia (Russian wheat aphid): 107161649
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Entry
107161649 CDS
T04900
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107161649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnx03019
]
107161649
Messenger RNA biogenesis [BR:
dnx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107161649
U7-dependent histone pre-mRNA processing factors
107161649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
Beta-Casp
CPSF100_C
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Baculo_FP_2nd
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
107161649
NCBI-ProteinID:
XP_015363628
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All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MTSIIKFYTLSGAHDESPPCYLLQIDEFKFLLDCGWDERFSMGVVNKLKRYIHQIDAVLL
SHPDRFHLGILPYLVGKCGLNCPVYATIPVYQMGQMFMYDLHQSLCNVEDFNLFNLDDVD
AAFDKVIQVKYNQVVSLKGKGIGLRIVALPAGHMVGGTIWRISKVGEEDIVYAVDFNHKK
ERHLNGSDLERLGRPSLLILDCFNAAYSQPRRRSRDEALMTCILTTLRVKGNVLMAIDTA
GRVLELMHMLDQLWRNKESGLGVYSLVFLTNVSYNTVEFAKSQIEWMSDKLMKSFEGARN
NPFFFKHVKLCHNMNDLSKVSEPKVVLASNGDLESGFSREVFIMWASNPKNSIILTDRTA
PGTLARDLIDEGGNRNIKLIVKKRVPLDDNELEEYNIKHNEEKLEASKIDPVSSDSEDEL
EAMRGKYDLLVDAETLTSKKSSKKEFPPMFPYYEEKSKFDPYGEIIKQEDFIKFDVAPGN
KPMVDEQNKICDEDEETDSYDVPSKCVEYEQIIYVAAKIVHIDFEGRSDGESIKQIVLAL
KPRRLILVRGNPYSTKVVYNFAKVFIDSKVFTPKIGQCLNVTTESHIYQVRLTDALLSKI
NFKKGPNGDLAYMNAKLKLKSRDNDMEVDNAVSEKMPRIDDQLFTLXPLEDHEIQPRKTV
LINRLKLSDFKQILSKNNIPCELSKGVLWCCNRTVCVRRNSSGKVLMEGIISRQYYYIRS
LLYSQFIII
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattataaaattttataccttgtcgggtgcgcatgatgaatcgccaccatgc
tatttattacaaattgacgaatttaaattcttgttggactgtggatgggatgaacgtttt
agcatgggtgttgtgaataaattaaaaaggtacatccatcaaatagatgcggttttatta
tcgcacccagatcgttttcatcttggaattttgccgtatcttgttggaaaatgcggttta
aactgtcccgtctatgctactatacctgtttaccaaatgggacaaatgttcatgtatgat
ttacatcaatctttgtgcaatgtggaagattttaatttatttaatttagatgatgtagat
gctgcgtttgataaagtcatacaagtaaaatataatcaagttgtttcattaaaaggtaaa
gggattggtttaagaatagtagcattgcctgctggccatatggttggcggtacaatttgg
agaatatctaaagttggcgaagaggatattgtctatgctgtagatttcaatcataaaaaa
gaaagacatttgaatggcagtgacttagaaaggcttggaagaccatcattactaatattg
gattgttttaatgctgcttattcacaacccaggcgtagatctcgcgatgaagctttaatg
acttgcatattgacaacattacgtgtcaaaggcaatgttttgatggcaattgatacggca
ggtcgtgttttagaattgatgcatatgctggatcaattgtggcgtaataaagaatctggt
cttggtgtgtactcattagtatttttaacaaatgttagctacaatactgtagaattcgca
aagtctcaaattgaatggatgagtgataaattaatgaaaagttttgaaggtgcaagaaat
aatccatttttttttaagcatgtaaaactatgtcataacatgaatgatttaagcaaagta
tctgaacctaaagttgtattagctagcaatggtgatcttgaaagtggattttcaagggaa
gtttttatcatgtgggcttctaatccaaaaaacagtattattcttacagacagaactgct
cctggtacattagctcgtgatttaattgatgagggtggtaatagaaatattaaactgatt
gtcaagaaacgtgtacctttagatgataatgagttggaagaatataatataaaacataac
gaagaaaaattggaagccagtaaaattgatccagtaagttccgattctgaagatgaacta
gaggctatgagaggcaaatatgatttattagtagatgctgaaacattaacttccaaaaaa
tcttccaaaaaagaatttcctcctatgtttccttactacgaagaaaaatctaaatttgac
ccatatggtgaaattataaaacaagaagattttataaaatttgatgtagcaccgggaaac
aaacccatggtagatgaacaaaataaaatatgtgatgaagatgaggaaacagattcatat
gacgttccatccaagtgtgtggagtatgaacaaatcatttatgttgcggccaaaattgta
catattgattttgaaggtcgctctgatggagaatcaataaaacaaattgtacttgcatta
aaacctagacgtttaatcttagttagaggcaacccatacagtactaaggttgtttacaat
tttgccaaagtatttattgatagtaaagtttttactcctaaaattggacaatgtttgaat
gtaacaactgaatctcatatataccaagtacgtttaacagatgcacttctttctaaaata
aattttaaaaaaggaccaaatggtgatttagcttacatgaatgccaaattaaaattaaaa
agtcgtgataatgatatggaagttgacaatgctgtatctgaaaagatgccaagaatagat
gatcaattatttacacttkaacctttagaagatcatgaaattcaacctcgcaagactgtg
cttattaaccgtttaaaactgtcagattttaaacaaattctatccaaaaataatatacct
tgtgaactttctaaaggtgtcttatggtgctgtaaccgaactgtatgtgttcgtagaaat
tcttctggaaaggttttgatggaaggaattatcagtcgtcaatactattacatacgtagt
ttattatacagtcagtttattatcatttaa
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