Diuraphis noxia (Russian wheat aphid): 107161682
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Entry
107161682 CDS
T04900
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107161682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107161682
03036 Chromosome and associated proteins [BR:
dnx03036
]
107161682
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107161682
Coactivators
SAGA/TFTC/STAGA complex
107161682
Chromosome and associated proteins [BR:
dnx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107161682
STAGA complex
107161682
TFTC complex
107161682
SAGA complex
107161682
SLIK complex
107161682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
WD_LRWD1
PEP5_VPS11_N
Beta-prop_SPT8
WDR54
DUF7226
Motif
Other DBs
NCBI-GeneID:
107161682
NCBI-ProteinID:
XP_015363677
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MEEDIKPDIKPVIDEAPKEPDDKKTSLCVALKILKKYNLNSTAETLKKEANLTDSAYNTS
EHDVSNALNIFKSQGDPSVYENAYITLSKFVETSLDIYKHELGCVLYPVFVHMYLDLVCN
RHEAEAVKFMQKFGPAQESYYQADIQNLAIITKKEELEDNALISNYKSNEFVVRMSRDTL
SLLKRHLKEKKQTVLLDIVQENLFFDVYEGIARNKQQIDAVAGGMIGEGTRQDNKSRVYY
GLLKEPDLQTAAATVNLDEDEEETQESEKPKKKKSKSNPLLSKKTKIDPNAPSLDRMPLP
QLREIDKKIKVQAVLDSAKRVALNHETLPSICCYTLLNCSNAVNCATISDDATMLAVGMA
NSRVRVWSLVPQKLRAMKTADQLLDIDLESDDVMHRILDDRSAETTRTLLGHYGPVYQVS
FSPDKTLLLSCSEDCTIRLWSLLLWSCVVAYKGSYHPVFDVKFSLHGYYFATSSRDRTAR
LWATDNYQSLRLFSGHFSDVDCCQFHPNSNYIATGSSDRTVRLWDCVTGEQVRLMTGHKG
EILTLCFSNEGRILASAGNDCNVLLWDIAHGHLVAMLTGHKGPIYTITFSRDSTILATGS
HDCKIMLWDYSKLLEDLSLDEMNVHNPTVMNDSSKYLLRAFGTKNSPVIHLFFSRRNIMF
CVCSFNSPQSN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagatattaaaccagatattaagccagtgattgatgaagctcctaaagaacca
gatgataaaaagactagtttatgtgttgcattaaaaattctcaaaaagtataacttaaat
tctactgccgaaactttgaaaaaagaagcaaatttgacagattctgcatataatacttca
gaacatgatgttagtaatgcattaaatatatttaaatctcaaggagatccatcagtttat
gagaatgcttatataactctatcaaaatttgttgaaacatcattagatatttacaaacat
gagttgggatgtgtattatacccagtatttgtacacatgtatttggaccttgtttgtaat
cgtcatgaagctgaagctgtaaagtttatgcaaaagtttggaccagctcaagaatcttac
tatcaagctgacattcaaaacttagcgatcattacaaaaaaagaagaattagaagataat
gcactgataagcaattacaagtcaaacgaatttgttgttcgaatgtctagagatacatta
tctcttttaaaacgacatttgaaagaaaaaaaacaaactgtcttattagatattgttcaa
gaaaatttgttttttgatgtatatgaaggaatagctagaaacaaacaacaaattgatgca
gtggcaggaggaatgatcggagaaggaactagacaagacaataaatccagagtatattat
gggttattgaaagaacctgatttacaaactgccgcagcaacagtcaacttagatgaagat
gaagaagaaactcaagagagtgaaaaaccaaaaaaaaagaaatcaaagtctaatccttta
ttatctaaaaaaactaaaattgatcctaatgctccatcattagatagaatgccattacca
caattgagagagattgataaaaaaattaaagttcaagcagttttagattctgctaagcga
gtggcattaaaccatgaaacattaccttctatatgttgttatacattattgaattgttct
aatgctgtgaattgtgccacaattagtgatgatgccacaatgttggccgtaggaatggct
aatagtcgagtacgtgtatggagcttagtacctcaaaaactacgtgccatgaaaacagct
gatcaactgcttgatattgatctggaatcagacgatgtaatgcataggatacttgatgat
agatcagctgaaaccactcgtacattactcggacattatggtcctgtatatcaagtgtca
tttagccctgataaaacattattgttgtcatgttcagaagattgtacaattagactttgg
agtttactattatggtcatgtgtagttgcatataaaggaagttatcatcctgtatttgat
gtcaagttcagtttacatggttattattttgccacttctagtagagatcgcacagcaaga
ctatgggcaacagataattatcaatcactaagattgttcagtggtcatttttcagatgta
gattgttgtcagtttcatcctaattcaaattatattgcaactgggtcaagtgacagaact
gtacgtttatgggactgtgttaccggagaacaagtgcgattaatgactggccataaagga
gaaattttaacgttgtgtttttcaaacgagggacgaattttagcatcagctggcaatgat
tgcaatgtactyctatgggacattgcacatggacatttagtagctatgcttactggacat
aaaggacctatttatacaattacctttagtagagacagtactattttagcaactggctct
catgattgtaaaataatgctctgggattattcaaaacttttagaagatctctcgttggat
gaaatgaatgtgcataaccctactgttatgaatgatagttccaagtacttacttcgagca
tttggtacaaagaactcaccagttatacatctatttttttcaaggcgaaatattatgttt
tgtgtatgttcatttaattctcctcaatcaaattaa
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