Diuraphis noxia (Russian wheat aphid): 107161703
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Entry
107161703 CDS
T04900
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107161703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnx03041
]
107161703
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107161703
Spliceosome [BR:
dnx03041
]
Complex C
Other components
Step II factors
107161703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
107161703
NCBI-ProteinID:
XP_015363699
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MDELTKLEHLSLVSKICTELENHLGLNDKDLAEFIIDLAYKNDTLETFKKALLQNGAEFS
DSFIANLLRIIQHMQPKTSKRSGNKSYENIDKSDTLACKFPGLAIPNDLVGEENDPISAV
MAELESFAPILSTNGTEDKTNKPSASNDKRLSRSRSKSHDRQHRRRNSNNRSRSRERHRR
DKSHDKQRDRQNDRSRDRQKDRQRDRSRDRQRNRSRDRQRDRSRDRQRNRSRDKYRNRSR
DKQSDRSHDRYHKDSRSNDGHRKERHEKEIESKSKFPELGKVYPGKVLNIVDFGCFVQLD
MFRQSQGLVHISQLRQKGRVTSVSDVVSRGDKVMVKVLSISGNQKISLSMKDVDQDTGED
LNPMIQPEDLGEDDDMMGGRNPDRPTSLLELQTIADADEMTNLKRMNKISSPERWEIKQM
LSANCIDKSELPDFDEETGILPKDNTEEEQDIEIEIVEDEPPFLHGHGRNLHDLSPVRIV
KNPDGSLAQAAMMQSALSKERREHKMLAREQEMDSVPKNVTKNWIDPLPDNDSRHLSSNM
RGIGLTAQDVPEWKKHVIGGKKSSFGMKTNLTLLEQRQSLPIYKLKDELIKAVTDNQILI
VIGETGSGKTTQITQYLAEAGFTSRGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYT
IRFEDCTSPETVIKYMTDGMLLRECLVDFDLKNYSVIMLDEAHERTINTDVLFGLLKQAV
TKRKELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITIM
QIHLREPPGDVLLFLTGQEEIDTACEILYERMKSLGPDIPELIILPVYSALPSEMQTRIF
EAAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLVVTPISQAQAK
QRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDF
MDAPPVESLIMALESLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVHLQCSEEI
LTIVSMLSVQNVFYRPKDKQALADQKKAKFNQVEGDHLTLLAVYNSWKNNKFSNAWCYEN
FVQVRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTARIQKAICSGFFRNASKKDPQEGYR
TLVDGQAVYIHPSSALFNRQPEWVMYHELVQTTKEYMREVTTIDPRWLVEFAPAFFKFSD
PTKLSKFKKNQRLEPLYNKYEEPNSWRISRVRRRRN
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattaacaaaattggaacatttgtcattggtatcgaaaatatgtactgaatta
gaaaatcatttgggactcaacgacaaagatttggctgaatttattattgacttggcttat
aaaaacgatacattagaaacattcaaaaaagctcttctgcaaaatggagctgaattttcc
gattcatttattgccaatctgctgcgtattatacagcacatgcaaccgaaaacatctaaa
cgatcaggaaataaatcatatgaaaatattgataaaagtgatacattggcatgtaaattt
cctggattagcaatacctaatgacctcgtcggtgaagaaaatgaccctattagtgctgtc
atggcagaattagagtcttttgctcctattcttagcacaaatggaactgaagataaaact
aacaagcctagtgcttcaaatgataaacgtttgtcaaggagtcgctccaagagtcatgat
cgacaacacaggagacgaaattctaataacagaagtagaagtcgagaaagacatcgtaga
gacaaaagtcatgataaacaaagagacagacaaaatgataggagtcgtgatagacagaag
gataggcaaagagatagaagtcgtgatagacaaagaaatagaagtcgtgatagacagagg
gatagaagtcgtgatagacaaaggaatagaagtcgtgataaatataggaataggagtcgt
gataaacaaagtgataggagtcacgatagatatcataaagatagcagaagcaatgatgga
catagaaaagaaagacatgaaaaagaaattgaatcaaaaagcaaatttccagaactggga
aaagtgtatcctggcaaagttttgaatattgtagactttggttgttttgtacaacttgat
atgttccgtcagtctcaaggacttgtacacatttcacagttacgtcaaaaaggaagagta
acttctgttagtgatgtcgtttctagaggtgataaagtcatggttaaagttttatcaata
agtggcaaccaaaagatttctttatccatgaaagatgttgatcaagacactggagaagac
ttaaatccaatgatacagcctgaagatttaggtgaagacgatgatatgatgggtggccgt
aaccctgacagacctacttccttactagaactgcagacaattgcggatgctgatgaaatg
acaaatttaaaacgtatgaataaaatttcatctccagagcgctgggaaataaaacaaatg
ttatcagctaattgtattgacaaaagtgaacttcctgattttgatgaagaaactggtatt
ttacccaaagataacactgaagaagaacaagatattgaaattgaaattgttgaagatgaa
cctccatttttacatgggcatggtagaaatctccacgatctcagcccagttcgtattgtc
aaraatccagatggttctcttgcacaagcagctatgatgcaaagtgcattgtccaaagaa
cgccgagaacataaaatgttagcgcgtgaacaagaaatggactctgtgcctaaaaacgtt
actaaaaattggattgatcctctaccagataatgatagtagacacttatcttcaaatatg
cgaggaattggtttgactgcccaagatgtaccagaatggaaaaagcatgttattggtggt
aaaaaaagttcattcggtatgaaaaccaacctgactctcttagaacagagacaaagttta
ccaatttataaactcaaagatgaactcatcaaagctgtgactgacaaccaaatattgatt
gtcattggagaaactggttcaggaaaaaccactcagattactcaatatttagctgaggcg
gggtttacatcaagaggtaaaattgggtgtactcaacctagaagagtggccgccatgtca
gttgcaaagagggtatctgaagaatttggatgcagattaggtcaagaagttggttacact
attcgttttgaagattgcactagtccagagactgtgatcaaatatatgacagacggtatg
ttgctgcgtgaatgtcttgtagattttgacttgaagaactattctgtaatcatgttggat
gaagctcacgaaagaacaataaacactgacgttttatttggattattaaaacaagctgtc
acaaaaaggaaagaacttaaacttattgtaacatctgccactctagacgctgtgaaattc
tctcaatacttttttgaagcccctatatttacaattcctggacgtacattccctgtagaa
gttttatatactaaagaacctgaaactgactatctggatgcatcacttattacaattatg
caaatacatttacgcgaaccacctggtgacgtattgcttttcttgactggtcaagaagaa
attgatactgcttgtgaaattttatatgaaagaatgaagtcattaggacctgatattcca
gagttgattattttacctgtttattctgctctacctagtgaaatgcaaactagaattttt
gaagcagctcctcctggatctcgaaaggttgttatcgctaccaatattgctgagacttca
ttgacaattgatggcatttattatgttgtcgatcctggatttgtaaaacaaaaagtctat
aattcaaaaactggaatggactctttagttgtcacaccaatttcacaagcrcaagccaaa
caaagagctggtcgtgctgggcgtaccggaccaggtaaatgttatagactttacacagag
agagcctatcgagatgaaatgttaccaacacctgttcctgagatacaacgtacaaattta
gcaaccacagtattgcaactgaaaactatgggcattaacgatttacttcattttgacttc
atggatgctccaccagttgaaagtttaatcatggccttggaatcattacattctttgagt
gcattagatgatgagggtctacttaccagattgggaagacgaatggctgaatttccatta
gaaccgaatctctccaaaatgttgataatgtctgttcatcttcaatgttctgaagaaata
ttgactattgtatccatgctttctgttcaaaatgtcttctacagaccaaaggataagcaa
gcrttggctgatcagaaaaaagcaaaattcaatcaagttgagggagatcacttaaccctt
ctggcagtgtacaactcttggaaaaacaataagtttagtaatgcatggtgctatgagaat
tttgtccaagttcgaacactcaaacgagcccaagatgttcgtaaacaattgcttgggatt
atggatagacataagttagatgttgtttcggccggtaaaaacacagctcgaatacagaag
gctatttgttcgggatttttccgcaatgcatctaaaaaagatccacaagaaggttatcgt
actcttgttgatgggcaggcagtctatattcatcctagcagtgctttgttcaaccgacaa
cctgaatgggtaatgtatcacgagctggttcaaacgaccaaagagtacatgcgygaggta
acaacaatagatccgaggtggcttgttgaatttgcgccagcgttcttcaaattctctgat
ccaaccaaattaagcaaattcaaaaagaatcaacgactagaaccactttataacaaatat
gaagaaccaaattcatggagaatttcaagagtgcgaagaagaagaaactaa
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