Diuraphis noxia (Russian wheat aphid): 107163409
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Entry
107163409 CDS
T04900
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnx03041
]
107163409
03016 Transfer RNA biogenesis [BR:
dnx03016
]
107163409
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107163409
Spliceosome [BR:
dnx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107163409
Transfer RNA biogenesis [BR:
dnx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
107163409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Motif
Other DBs
NCBI-GeneID:
107163409
NCBI-ProteinID:
XP_015366313
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MAAFEEMGVLPEIGKAIEEMDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
IQIVWETLKQSSKHQGILPVKVSSHADPWAMSVWDRSSAVAVTPDGIKCQSREVKDWHGC
RATKGVRNSGKYYFETTVTDEGLCRVGWSTPGAVLDLGTDKFGFGFGGTGKKSNNKQFDS
YGESFGLNDTIGCWLDLDNWTIGFSKNGKYLGDAFKIPVNLKTSAFYPAVVLKNAEITFN
FGESSLKYEIPKDFSPISKAPSNCIELSQCNAPKINSNTKKPNNAPYAIIIEPSRELAEQ
TFNQIKKFKKYLIEPQVKDLLVVGGFSIKDQIAALSAGVDIIVATPGRLEDLISGSHLSL
SQCRFYILDEADGLLKQRYTKLIENLHEKMPKVSSDGKRLQMIVCSATLHDFEVKKLASR
LMHFPTWVDLKGEDAVPETVHHVVVNVDSQKDSSWISLKNHIPTDGVHDRDNVRALNTSE
ALSQGIKLLKGEYCIKAINKYKMDKALIFCRTKLDCDNLEKYFKQLGSFYTCCTLHGSRN
VNDRRMNLEKFKNGAIKFLICTDVAARGIDVNGLPFMINMTLPDDKANYVHRIGXVGRAE
RMGLAISFVATTPEKVWYHGEWCPSRGQRCSNTNLTSIKGCCIWYNEPQYLAEIEDHLNI
TIQQVDSELDIPMNEFDGKVTYGQKKTNKGPIYKNHYDQLLSTINELTQLETKAQYLYLH
MLNN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtttgaagagatgggagttttgcccgaaataggtaaagccattgaagaaatg
gattggctattacctacagacgtccaagctgaagcgatacctctaatacttggcggtggt
gatgtattaatggccgcggagactggtagcggtaaaacgggagcattctgtttaccagtt
attcaaatagtgtgggaaactctcaaacaatccagtaaacaccagggaattttaccagtc
aaagtgtctagtcacgcagatccttgggccatgagtgtctgggatcgttcttctgctgtg
gctgtgactccagatggtataaaatgtcaatcaagagaggtaaaggattggcatggttgt
agagctactaaaggcgttagaaattcgggaaaatattattttgaaacaactgtcaccgat
gaaggtctatgtcgagtcggatggtcaacaccaggagccgtgttagatctgggtacagat
aaatttggttttggttttggtggaactggcaagaagtcaaacaataagcagtttgattct
tatggagagagttttggtttaaatgataccatcggctgttggttggatctagacaattgg
actataggattcagtaaaaatggtaaatatctaggcgacgcatttaaaatacctgtaaat
ctgaaaacatctgcattttatccagctgttgtattaaaaaatgctgaaataacatttaat
tttggtgaatcatcattgaaatatgaaattcccaaagacttctctcctattagtaaggca
cctagcaattgcattgaactttctcagtgtaatgctccaaaaataaattcaaatacaaaa
aagccaaataacgcaccatatgcaataattattgaaccttctagagaattggctgaacaa
acttttaatcaaattaaaaagtttaaaaaataccttatagaacctcaagttaaagatctc
ctagtagttggtggttttagtattaaagatcaaattgctgccttatctgcaggtgttgat
attattgttgctacacctggccgcctagaagaccttatatctggcagccatttatcttta
tctcagtgtagattttatatactagatgaagccgatggattattaaaacaacgttataca
aagctcatagaaaatctccacgagaagatgccaaaagtttcaagtgatggtaagagactt
caaatgattgtttgctcagcaacacttcatgattttgaagtgaaaaaattagcatcgcgt
cttatgcatttcccaacttgggttgatcttaaaggtgaagatgctgttccagagactgta
caccatgttgttgttaatgttgattcccaaaaagattcatcatggatttctttgaaaaat
cacataccaactgatggtgtacatgatagagataatgtaagagctcttaatacatctgaa
gctttatctcagggaataaagcttttaaagggtgaatactgtatcaaagctataaacaaa
tacaagatggacaaagctctcatattttgtcgcactaaacttgactgtgataatttagaa
aaatacttcaaacaacttggttcgttttatacttgttgtactcttcatggatcgcgtaat
gttaatgaccgtagaatgaatttagaaaagtttaaaaatggtgcaatcaagtttttaatt
tgtactgatgtagcagctcgtggaattgatgttaatgggttacctttcatgattaatatg
actttacctgatgataaagctaattatgtacacagaattggcygtgtgggtagagcagaa
cgtatgggattggccatttcatttgtggcaactaccccagaaaaagtgtggtatcatggt
gaatggtgtccatcgagaggtcagaggtgttcaaatactaatttaacttctatcaaaggt
tgttgcatatggtacaatgaaccccaatatttagctgaaattgaagatcatttaaacatt
actatacaacaggttgattcagaactcgacattccgatgaatgaatttgatggaaaagtc
acatacggccaaaaaaaaacaaataaaggacccatatataaaaatcattatgatcaacta
ttgtctactatcaatgaactcacacaattagaaactaaggctcaatatttgtatttgcac
atgcttaataattaa
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