Diuraphis noxia (Russian wheat aphid): 107164353
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Entry
107164353 CDS
T04900
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03018
RNA degradation
dnx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107164353
09123 Folding, sorting and degradation
03018 RNA degradation
107164353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnx03019
]
107164353
03041 Spliceosome [BR:
dnx03041
]
107164353
Messenger RNA biogenesis [BR:
dnx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107164353
mRNA degradation factors
5'-3' decay
Lsm complex
107164353
Spliceosome [BR:
dnx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107164353
Complex C
U2 snRNP components
107164353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
107164353
NCBI-ProteinID:
XP_015367638
LinkDB
All DBs
Position
Unknown
AA seq
98 aa
AA seq
DB search
SIFLQLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLVDISVTDPEKYPHMAS
VRNCFIRGSVVRYVQLPADEVDTQLLQDAARKEATVSR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
tctatttttttacagttgttctactctttttttaaatcacttgttggaaaggatgtcgtc
gtggaattaaaaaatgatctgagtatttgtggaacattacattctgtggatcaatatttg
aatatcaaactcgttgacattagtgtaactgatcctgaaaaatacccacatatggcttct
gtgaggaactgtttcatcagaggttctgtggttcgctatgtacagttaccagcggatgaa
gttgatacacagttgttacaagatgctgcacgtaaagaagcaacagtttcacgctaa
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