Diuraphis noxia (Russian wheat aphid): 107164779
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Entry
107164779 CDS
T04900
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107164779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnx03019
]
107164779
03012 Translation factors [BR:
dnx03012
]
107164779
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107164779
Messenger RNA biogenesis [BR:
dnx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107164779
Translation factors [BR:
dnx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107164779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_19
AAA_22
nSTAND3
ATPase
ResIII
T2SSE
NPHP3_N
AAA_14
AAA_23
NACHT
AAA_24
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
107164779
NCBI-ProteinID:
XP_015368212
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MPLMKPYRTIKQTGPKDKNKGPRLQSKSSSSRLLLEENDFFLDNVGPSNMNEKQKSRSSH
PPHLKGRDIGLWHARKQASMREDEEMLDMGRPKVKPPSHLRGRELDMWHKEQNRLWQKSK
KKEQQKELGKCFIKLXIEGISRMEMQLQQLEEEMPIPDENINQVPCVKSNSKSNKKDYSN
HNYRALNLLTLKDEDVDENAEYIIDRYKKLEDSNFKRKFLDNITGSIEENLVASIQSNMK
LQNDESKNAFLKNELENKRRSAKYRSMCEIRKKLPSYSKKDEILELIHRNQVILISGETG
CGKTTQMAQFILDDAIMSGRGSTCRIVCTQPRRISAISVAERVADERAERIGEASVGYQI
RLERKLGREFGSILFCTTGILLQHIQRDSALNYYSHIIIDEIHERDTISDFTLTILKSII
PVRPDIKVILMSATLNAAAFSKYYNDCPSLNIPGFTYPVEELYLEDIYTLNKFRYFPKKS
TQRTRKIKPGDPFTEFVFPYVKEMQRLKKYPSAILNWLENPMSEDTDYELILELIYYICN
NKDDGAILVFLSGWDQISKLTKILKDKGFGNTSRYILIPLHSMLPTVSQKSVFESPPRGV
RKIILSTNIAETSVTIDDVVYVIDNGRMKLKGFDAENNIGTLNEEWVSLANSRQRRGRAG
RVRPGICYHLYTRGRERSFNDYVLPEMMRTSLEEVILQAKILQVGMVTPFLEKVMNPPET
KALEVALKLLIDLNALDEKENLTPLGFHLAKLPIGPLEGKMIILGAMFSCLSPIMTIAAS
LNFKDPFVMPANKEYQCREIKKDMDEGHQSDHLMVTRAMSKFLLAKQENRAWEFCRDNFL
MYNTMNMLYELKSQYAKYLCDLGFIKTXSYTDSEYNQNSNNVKLLKCVLAAGLCPNIAVS
NSKIKTNGRKLSKFITAEDGKVEIHPKSVNSIDSYYESPLLLYHTKLKTSSIFLHDTTMI
YPFPVILFAKSLKTTGEKTDHVTFSLNPQINFTCCARTAMFIKQVRHRLKWLIDHLMSHP
EEISCNSNSSSGKALK
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaatgaaaccttatagaactattaagcaaactgggcccaaagacaaaaataaa
ggacctagactgcagtcaaaatcatcatcatcacgactactcttagaagaaaatgatttc
tttttggataatgtcgggccatcaaatatgaatgaaaaacaaaaatcaagatcatctcat
ccaccacatttaaaaggacgagatatcggcttatggcatgctcgtaaacaagcaagtatg
agagaggatgaagaaatgcttgatatgggtagacctaaagttaagccaccttctcattta
agaggtcgtgaattagatatgtggcataaagaacaaaatcgtttatggcagaaatctaaa
aagaaagaacaacaaaaggaactaggaaaatgttttattaagctaakaattgaaggaatt
agccgtatggaaatgcagcttcaacaacttgaagaagaaatgccaattcccgatgaaaac
attaaccaagtcccatgtgttaagtcaaattccaaatcaaataaaaaagattatagcaat
cataattatagggctttaaatcttttgactttaaaagatgaagatgtagatgaaaatgct
gagtacataatagatagatataaaaaactrgaggattcaaatttcaaaagaaagttttta
gataacattactggatctatagaagaaaatcttgtcgcatctattcaaagtaatatgaaa
cttcaaaatgatgaatcaaaaaatgcatttttgaaaaatgaacttgaaaataaacgtaga
agtgctaaatacagatctatgtgtgaaatcagaaaaaaactgccttcgtatagtaaaaaa
gatgaaattttagaactcatccataggaatcaagttatattgataagtggtgaaacaggt
tgtggtaaaactacccaaatggcacaattcattcttgatgatgctattatgtcaggtcgt
ggttcaacttgtagaattgtttgtactcaacctagaagaattagtgctatatcagtggct
gaacgtgtcgctgatgaaagagctgagcgtattggagaagcaagtgtcggctatcaaatt
agacttgaaagaaaactgggtcgtgaatttggatctatattgttttgtactactggcatt
ttacttcaacatatccaaagagattcagctttaaattattactcgcatattattattgat
gaaatacatgaacgtgacacaattagtgattttacgttaacaattctcaagagcatcatc
cctgttagacctgatattaaagttatattaatgagtgcaacattaaatgctgcagcattt
tctaagtattacaatgactgtccatctttgaatatacctggattcacatatccagttgaa
gaactttatcttgaagacatttatacattaaataagtttagatattttcctaaaaaatca
acacaaagaactcgcaaaataaaacctggtgatccatttactgaatttgtatttccttat
gtaaaggaaatgcagaggcttaaaaaatatccttctgcaatattaaattggttggaaaat
ccaatgtctgaagatacagattatgaattgatattagaactcatatattacatttgtaat
aataaagatgatggagcaatacttgtgtttctatctggatgggatcaaatatcaaaactg
actaaaattttaaaagataaaggctttggaaatacatctcgttatatacttattcctttg
cattccatgttacctactgtatctcaaaaatctgtttttgaatcaccacctcgaggtgtt
cgtaagatcatattatccacaaacatagcagaaacttcagttactatagatgatgtagtt
tatgtaattgataacggccgtatgaagttaaaaggatttgatgcagaaaataatattgga
actctgaatgaagaatgggtgagcttagcaaattctagacaacgccggggtagagcgggt
cgtgtaagacctggtatttgttatcatttgtatacaagaggacgtgaacgatcatttaat
gattatgtactacctgaaatgatgcgaacaagcttagaagaagtaatacttcaagctaaa
atattgcaagttggtatggtaaccccgtttttggaaaaagttatgaatccaccagaaact
aaagcccttgaagtagctttaaaacttttgattgacttaaatgctttggatgaaaaagaa
aatcttactccattaggttttcatcttgcaaaattaccaatcggtccacttgaaggtaaa
atgattattctaggtgcaatgtttagttgcctgagtccaataatgacaattgctgctagc
ttaaattttaaagatccttttgttatgccagcaaacaaggaataccaatgtcgtgaaata
aaaaaagatatggacgaaggacatcaaagtgatcatcttatggtcacaagagcaatgagt
aaatttttactagcaaagcaggagaacagagcatgggaattttgcagagacaatttcctg
atgtataatacaatgaatatgttgtatgaattaaaatctcaatatgctaagtatttatgt
gatctgggattcattaaaactyccagttatacagattctgaatataatcagaattcaaac
aatgttaaacttttgaagtgtgttctagctgctggtttgtgtcccaatattgctgtttct
aactctaaaattaaaacaaatggccgtaaattatcaaaattcattactgctgaagatgga
aaagttgaaattcatcccaaatcagtgaattctattgatagttactatgaaagtcctttg
ttattataccacacaaaactgaagacttcttcaatatttttgcatgatactactatgatt
tatccatttcctgtgatactgtttgcaaaaagtcttaaaacaactggtgaaaaaactgat
catgttacatttagtcttaaccctcaaataaatttcacttgttgtgctagaacagcaatg
tttataaagcaagtaagacatagattgaagtggttgattgaccatttaatgtcacatcct
gaagaaataagttgtaattcaaattcaagcagtggaaaagcgctcaagtaa
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