Diuraphis noxia (Russian wheat aphid): 107165129
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Entry
107165129 CDS
T04900
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107165129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107165129
03036 Chromosome and associated proteins [BR:
dnx03036
]
107165129
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107165129
Chromosome and associated proteins [BR:
dnx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107165129
PBAF complex
107165129
GBAF(ncBAF) complex
107165129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
107165129
NCBI-ProteinID:
XP_015368710
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MLALGPKKDGSPNVKFFESPETLNMLEGVRTWLMKNHKKYLQADPPTNKTLAALVLQLIQ
FQEDNLGKNVSKPPLTRLPMRCFLDFKPGGALCHLLATVYKFKVEQGWRRFDFQVSKSPS
RMDRSIEMFMNVEKALIQAKCLSMPVILIHPDVDKIVQNRIKDIIKRHQGTLTENEQEAT
HILFPVVDPLDEEYARPVYKNKERWIQMHWYYFPDSHDSWVTTELPVEPPEVLYGSQPPT
PWRVTASWVLDLDTYNEWMNEEDYEVDETGKKKVHKLRLSVEDFMSNDPSGGKKKPKRKR
TPSPPSKPNKRKSGRGGSVMSVKKNKVDDDSDDLTRDLEDPISEPNISEVNLNISQIKTG
SSSSKKDSDSQPIRSGTLMDLDEDLDKSEDNKNFDSNTQDGTSCPASGVSSTGGPLSIIK
EEGPEDNATEQMHHIVIPSYAAWFDYNSIHTVEKRALPEFFNNKNKSKTPEIYLAYRNFM
IDTYRLNPTEYMTSTAARRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTAMGPPPTS
HFHILSDTPSGLQPVNPPRTQQPSAAKTLLDLEKKPVIADKDAGHHPEPLSGFGLKLDQY
AKKPGLLRNKTAAGMTRDWTEQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRL
PIEDPYLEDFETGGALGPLSYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEF
AAIRDEVPSALMDAHVKNIEAATTDGKYDPAVGLLQSGIAGTFPEKEEENEKEKKEPEDV
KDPSLTTDNDKSIRTDKEVVSDKDKEQPMDVDKKPCEETTASTQSTTVNRTAEEEPERIV
KDSEVQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTM
EREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHHRLQAAGVPPPVPNPEHVAPAS
PAPPMAT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgttggccttgggtccaaaaaaggacggcagtccgaacgtgaagtttttcgaatctcct
gaaacgctgaacatgttggagggcgttaggacgtggctaatgaaaaatcataaaaagtac
cttcaagcggatccaccgaccaacaagacacttgcagccctggtgttgcagctcattcaa
ttccaggaagacaatctcggcaaaaatgtcagcaaaccaccactcactcgcttgcctatg
cgctgttttttggacttcaaacctggaggtgctctatgccatttgttagctactgtgtac
aagtttaaagtggaacaggggtggcgaagattcgatttccaggtcagtaagagtccttct
agaatggacagaagtattgaaatgtttatgaacgtcgaaaaggccttaattcaggctaaa
tgtctttctatgccagttatacttattcatccagatgttgataaaatagtacaaaaccgc
ataaaagatatcataaaaaggcatcaaggaacactcactgaaaacgaacaagaagctacc
catatcttatttccggttgtggatccattggatgaagaatatgctcgacccgtgtacaaa
aataaagaacgctggatacaaatgcactggtattattttcctgattctcatgattcatgg
gtaactactgaattaccagttgaacctcctgaagtgttatatggcagtcaaccaccaact
ccttggagggtcacagcatcttgggtcttagatttagatacttataatgaatggatgaat
gaagaagattatgaagttgatgaaactggcaaaaaaaaagttcataaattgcgtctctca
gttgaagatttcatgagtaatgatccatctggaggtaagaaaaaacctaaaaggaaacga
actccatcaccgccctcaaaaccaaataaacgtaaaagtgggcgtggaggttctgtgatg
agtgttaagaaaaataaagttgacgatgacagtgatgatctaacaagagatcttgaagat
ccaatttcagaacccaatatttctgaagttaatttaaatatatctcaaataaaaactgga
tcatcttcatcaaagaaggatagtgattctcagccaattagaagtggtactcttatggat
ttagatgaagatctagataaaagtgaagataataaaaactttgatagtaatactcaagat
ggtacaagttgtcctgcttctggagtatctagtacaggagggcctttatcaattataaaa
gaagaaggaccagaagataatgctactgaacaaatgcatcatattgttataccaagttat
gctgcatggtttgattataattcaattcatacagttgagaaacgagcattaccagagttt
ttcaataacaagaataaatcgaaaacccctgaaatatacttagcgtatcgaaatttcatg
attgatacatatagacttaatccaactgaatacatgacgagtaccgcagctagacgtaat
ttagctggtgatgtttgtgcaattatgagagttcatgcttttttggaacaatggggtcta
attaactatcaagttgatgccgatagtagaccaactgcaatgggtccaccaccaacatct
cattttcatattctatctgatactccatctggtctacaacctgttaatcctcctagaact
caacaaccttcagctgctaaaacacttttagatttagagaaaaagcctgtaatagcagat
aaagatgcaggtcatcatccagaaccattatctggttttggacttaaattagatcaatat
gccaaaaaacctggtttattaagaaataaaacagctgctggaatgacaagagattggact
gaacaagaaactttattattacttgaaggattagaaatgtataaggatgattggaacaaa
gtttgtgaacatgttggcacaagaactcaagatgaatgtatactgcactttcttcgttta
cccatagaagatccgtacttagaagattttgaaactggtggtgctttgggtcctttgtct
tatcaaccaattccatttagtaaatctggtaatcctattatgtctactgttgccttttta
gcctctgtagtagatcctagagttgctgctgcagcagctaaagctgctatggaagaattt
gctgctattcgagatgaagtaccttcagcattgatggatgctcatgttaaaaacatcgaa
gcagccactactgatggaaaatatgatccagctgttggacttttacagagtggtattgca
ggcactttcccagaaaaagaagaagaaaacgaaaaagaaaagaaggaaccagaagatgtc
aaagatccatcattgacaacagataatgacaaatctattcgaactgataaagaagtagtc
tctgataaagataaagagcaacctatggatgttgacaaaaaaccatgcgaagaaactaca
gctagtacacagtccactactgttaatcgtactgcggaagaagaacctgaacgaatagtt
aaggactctgaagtacaagctgctgctgctgcagctttagccgcggctgccgtcaaggca
aaacatttagcagctgtagaggaacgaaaaataaaatctcttgttgcattattagtagag
actcaaatgaaaaaactagagataaagctaagacactttgaggaactagaaacaactatg
gaaagggaacgtgaagggttagaatatcagagacaacagttgatacaagagcgacaacaa
tttcacttagagcaactaaaagctgccgaattcagagcccgccaacaggctcatcataga
ctacaagctgctggtgttcctcccccagtccctaacccagaacatgttgctcctgcatca
cccgcacctccaatggccacataa
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