Diuraphis noxia (Russian wheat aphid): 107166874
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Entry
107166874 CDS
T04900
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03022
Basal transcription factors
dnx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107166874
09124 Replication and repair
03420 Nucleotide excision repair
107166874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107166874
03400 DNA repair and recombination proteins [BR:
dnx03400
]
107166874
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107166874
DNA repair and recombination proteins [BR:
dnx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107166874
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
107166874
NCBI-ProteinID:
XP_015371199
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSKEPSTSKEKRKNLRKDDGSKILKVLTLYEYLIKLPEAVQDRLYSHPPTCLTVFRVLPD
IAQQFTLRILFIEQPVPQSVLSSWVPANYSSELDESIEVATNLHIWKLTGVSGGLKGWIL
NSTFKKKLKVALMGGGRSTVPNSDMTADPKARDIDFLDSYAYERWECILHYMVGSKHEGI
SSDAVRVLLNAGLMVRDTDDSPVITSTGFQFLLLDMATQVWYFMLRYMETVESRGLDLAQ
CLTFLFQIHLGTLGWDYITDEMSENLQAFLQHLREFGLVYQRKRKAGRFYPTRLVIEMGQ
GNSRTSERMKNKERYIIVETNFRVYAMTDSDLKVALVALFTHMLYRFPNMAAGILTRDSV
RTALRSGITAAQIVRFLTVHTHPQMQECGMPQTVIDQIYLWENERNRLTYTDGVLYSNIN
TPNDYETIKNYAAEIGALVWCDERRRNIVVSTDGHDDVRKFWKKQPKSDPF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaacccagcactagcaaagagaaacggaagaatttacgtaaagacgacggt
tctaaaattttgaaagtcctgacattatacgaatacctcatcaaacttccagaagccgtt
caagatcggctatacagtcatccgccgacttgcctaacagtgtttagagtgttacctgac
attgcacaacagtttactttacgtattttgttcatcgaacagccagtgccgcaatcagtt
ctttcatcctgggtgccggccaactattccagtgaacttgacgaatctatagaggtagct
accaatttgcatatatggaaattaaccggagtttctggtggcctcaagggatggatttta
aattctacgttcaagaagaaactcaaagtagcgcttatgggcggtggccgttctacagta
cctaacagtgatatgacagctgatccaaaagcaagagatatagactttttagattcctac
gcgtatgaacggtgggaatgcatattacattatatggttggttctaaacatgagggcata
tcatcagatgcagttagggttttactaaatgcaggtcttatggtcagagacacagatgat
agtccagtcattacatcaacaggatttcagtttctactgctggacatggccactcaagta
tggtatttcatgctccgctatatggaaacagttgaatcgagaggtctcgatcttgctcaa
tgtctaacgttcctctttcaaatacatctcggtactttaggatgggattatataacagat
gaaatgtctgaaaaccttcaagcgtttttacaacatctacgagaatttggattagtttat
caaaggaaacgtaaagctggacgtttctatcctactcgattagtaattgaaatggggcaa
gggaacagccgtacttcagaacgaatgaaaaataaagaacgttatataattgtagaaacc
aattttcgggtttatgctatgactgattctgatctaaaagttgccttagttgcattattt
actcatatgctttacagatttccaaacatggccgctggtatattaacaagagattctgtt
cgaacagcattacgtagtggcattactgctgcacaaatagtgagatttcttactgtacat
acacatccacaaatgcaagaatgtgggatgccacaaactgtaattgatcaaatttatttg
tgggaaaatgaaagaaatcgactaacatacacagatggtgtgttatatagcaatataaat
acacctaatgattatgaaacaataaaaaattatgctgctgaaattggtgcattggtttgg
tgcgatgaaagaagaagaaacattgtcgtgagtactgatggacacgatgacgtaagaaag
ttttggaaaaaacaaccaaaatctgatcctttttaa
DBGET
integrated database retrieval system
