Diuraphis noxia (Russian wheat aphid): 107167394
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Entry
107167394 CDS
T04900
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107167394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnx03041
]
107167394
Spliceosome [BR:
dnx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107167394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
NBCH_WD40
PRP4
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_SCAP
eIF2A
Ge1_WD40
Beta-prop_IFT140_1st
WD40_like
Beta-prop_SPT8
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
107167394
NCBI-ProteinID:
XP_015371905
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDDEEITYVKKQKTIHYGSLEDQERVRLSSLAFTEGDAEPKVVGGNINVSNEYFDLEDA
ISKDKQALLEEFERKKKARHVQVSTDDDEVKKNLRKLGQPICLYGEGPAERRNRLRELLS
RVGEDVVAKKPEEEREKRQQIKDQDTTWYHEGPPSLLDARLYMAEYSLLRSHIRLEKLRE
EASIPESTLTARLQDLHKYTTSLSIYCSQIGDTRPISYCRFSPDSRFIATSSWSGLCKLW
SVPDCSLVQTFRGHNCNVCSITFNPHAGTAENICDLVSCASDGSVKLWSMDSKKEEPVAD
LEGHAPFRVSRADFHPSGRFLGTCCFDNSWRLWDLEQGEEVLHQEGHCKPVYCMSFQCDG
SIVATGGLDAFGRVWDLRTGRCIMFMEGHLKSIYSIDFSPNGYQMATGSEDNTCRIWDVR
KRSCLYTIPAHMSLVSGLRYQPEGHFIVTSSYDNTIKIWANKTWQMLKTLSGHDNKIMGV
DISPDSKYIASSSYDRTFKLWAPEYTS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaagaaataacttacgtaaaaaaacaaaaaacaatacactacggttca
ttagaagatcaagaacgtgtccgtttatcatctttggcttttactgaaggcgatgctgaa
cctaaagttgtaggaggaaatataaacgtatccaatgaatattttgatttggaggatgct
atatctaaagacaagcaagctttacttgaagaatttgaacgtaaaaagaaagcccggcat
gtgcaagtttctactgatgatgatgaagttaaaaaaaatcttaggaagcttggacaaccc
atatgcttgtatggagaaggaccagcagaaagaagaaatagattgagggaactgctttcg
agagtaggagaagatgttgtagcaaaaaaaccagaagaagaaagagaaaaacgccagcaa
attaaggatcaagatacaacctggtatcatgaagggccaccttcactactagatgctcgt
ttatatatggcagagtattcattgttgagatcacatattcgtttggaaaagctcagagaa
gaagctagtatacctgaatcaacacttacagcgcgcttacaagatttacacaaatacaca
acatctctttctatttattgtagtcaaattggagatactagaccaatttcatactgccga
tttagtcctgactcgcggtttatagctacatcatcttggagtggtttgtgtaaattatgg
tcagttcccgattgttcattagttcaaacattcagaggacataattgtaatgtctgctct
atcacatttaatccacatgctggtactgctgaaaatatttgtgatctcgtatcatgtgcy
agtgatggttctgttaaactgtggtccatggatagtaaaaaagaagaacctgtagcagac
ctggaaggccatgcaccatttagagtgtcaagagcggattttcatccatctggtcgattt
ttaggaacttgctgttttgataattcttggcgattgtgggatttagaacaaggggaagaa
gttctccatcaggaaggacattgtaaaccagtttattgtatgtcatttcagtgtgatgga
tcaattgttgctactgggggcttagatgcttttggtcgtgtttgggatttgcgtacagga
agatgcattatgtttatggaaggtcatttaaagtctatatatagtatagatttttctcct
aatggttaccaaatggccactggtagtgaagataacacatgtcgtatttgggatgttaga
aaaagatcatgtctatacactattccagcgcatatgagccttgtttcaggactgagatac
caacctgaaggtcattttatagtcacgtcttcatatgataacacwatcaagatttgggcg
aataaaacatggcaaatgttaaaaacactatctggacatgacaacaaaatcatgggagtg
gacatatcaccagattctaaatatatagcttcttcatcatatgatagaacctttaaatta
tgggctcctgaatacacatcatag
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