Diuraphis noxia (Russian wheat aphid): 107167456
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Entry
107167456 CDS
T04900
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107167456
03036 Chromosome and associated proteins [BR:
dnx03036
]
107167456
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107167456
Chromosome and associated proteins [BR:
dnx03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107167456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
HHH_9
HHH_3
S1
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
107167456
NCBI-ProteinID:
XP_015371989
LinkDB
All DBs
Position
Unknown
AA seq
1814 aa
AA seq
DB search
MSQFIDSEAEESEDEELDEINKKKAKRIKSMQSDDDDDEDDEEKIREELKDLIDDNPIDE
SDGSGDESDGSKKRKKSDDDFDDRLEEDDYDLIEENLGVKVERRKRFKRLRRLEDEESDD
EGTGENATEDREAIANTLFDMSDNEEERTTDRVSSRAERVDTYDVEGDEEGEGYSDEDDD
GFIVDDEGRPIKEKKKKRKHIYQDAALQEAQDIFGVDFDYDEFEKYDDEYEDDVSDDDYL
EDEEDGERRQRPKPQKRRKATRKSIFEIYEPIELKRGHFTDLDNQIRNNDIPERMQLREV
PVTPVPEGSDELDDEADWIYKQAFCKPTITTQENKGGVDPRLQSKKGPQTIGKIKKALDF
MRNQNFEVPFLAYYRKEYVEPELDINALWRVYHFDAKWCQLKSRKTMLIELLEKMRNYQM
EMLMKDTNAPMPDHIRIIKDEDIDKLRAVQTNEELKDIQGHFMLYYANDVPAMQECARKK
SRESKIKARELREERRKLAIEAGEDVPDDDEDDGNLDDDDSNVETVKPASSSGPYTMCLK
SGLAGFAKRFGLKPEHFAANVRDNYQRHEVDQESVDPYKLAGEYCNELLKTPDEVLKAGK
YMVACQLSREPLIRKCLRETFFDRAKINIVPTKRGIKEIDENHNCYSMKYIRRKPVRDLV
RDDFLKLQMAEDDKLLTISFDEEVDGLGSLPYIEEVKQLYIRDEFSSNVQQWNDVRRECV
DLAYRKLLMPEMVKELRRSLLAEAKEHILKSCKHKLSNWLAIGPYKPEVDEDDDDWDTSK
GIRVMGLAYSPDHEQASFACILSTDGEVVDHLRLPYIMKRPFNDDVKAKRDGDFNHIKNF
ILFKKPHVIVLGAESRDALWLVRDIKAVVDQLVVDEQFPQIQVEILDNHLARIYANSIKG
ENEFRDYPQLLRESISLGRRMQDPLVEFSQLCSTDDEILCLRYHQYQEVLNQEELLEGLY
QEFINRTNEVGVDINEVVQRVYAPNLLQFVCGLGPRKATALIKLMKQTNQRLENRTQLVT
ACHMGPKIFINCAGFIRIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDE
EANPAGALEEILDAPERLKDLDLDAFAEELERQGFGNKSITLYDIRQELNHRYKDIRVAY
KPPNSAQLFELLTKETQETFFVGKMVLATVAGIARRKPQNDQLDKANPVRNDETGLWQCP
FCFKNDFLELSDVWNHFDAGGCPGQASGIRIRLDNGIXGFIAMKNLSNTHVANPEDRVRF
NQAIHCRIIKIEPDRFSFEATSKSSDLKDQEHHWRPQKDPYYDHETESRQRKTELDKNKI
KNAQTYIKRVIVHPCFHNVSFAEAVKLLNNSDQGDAIIRPSSKGADHLTVTWKVADNVYQ
HIDITEKGKVNAFSLGRSLWIGTEEFEDLDEIIARHITPMASNARELLRFRYYRDTDGGN
IEKAEQILREEKTNNPSKIHYIVSVSQKYAGKFLLSCLPXRRSKHEYITVTPEGYRFRSQ
NFDSIGSLFRWYKEHFRDATPHVTPITSRSAGQTYGPSPHTEPSPMNRSHSSHSNATPQY
SQSPHASYNNMQQSAYNTPYTPSGQTPYLGNYATPRYSAAQAPVHDGVFLHPSSVTPIVQ
SSPKPSPSKPPVQSADPNDWRRMAEEWAKAKQRGDGGFSTPMSDGGGRHTPRSRYNNHRY
NMNRERETSIPRSDAPSPTPSASSYGYNSPAPSKTYKSSYITSSHNSSKSPRGPSSNSGT
PYDPFTMDPGQDSPGVYASSSRSVRNDENDPDLRYASPGSRWTPRSGRSTPHTINSPRSM
VESSMGDNTPLYED
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtttatagactcggaagcggaagaaagtgaagatgaagaattggatgagata
aataaaaaaaaggcaaagagaattaagtctatgcaaagtgatgatgatgatgatgaagat
gatgaagaaaaaattcgtgaagaattaaaggacttaattgacgataatccaattgatgaa
agtgatggttctggtgatgaatcagatggttcgaaaaagagaaaaaaatctgatgatgac
tttgatgatcgattggaagaagatgattatgatcttattgaagaaaatcttggtgttaaa
gttgaaagaagaaaacgattcaaaagacttagacgtttggaagatgaagaaagtgatgat
gaaggtactggtgaaaatgctactgaagatcgagaagctattgctaacactttatttgat
atgtctgataatgaagaagaaagaacaactgatcgtgtttcttcaagagctgaacgggtt
gatacttatgatgtagaaggagatgaagaaggagaaggatattcagatgaagatgatgat
gggtttattgtagatgatgagggacggccaattaaagagaaaaagaaaaaacgtaaacat
atatatcaagatgctgcccttcaagaggcacaagacatatttggtgttgattttgactat
gacgaatttgaaaaatatgatgatgagtatgaagatgatgtgtctgatgatgactatttg
gaagatgaagaagatggcgagagaaggcaaaggccaaaacctcaaaaacgtagaaaagct
actagaaaatcgatatttgaaatatacgaaccaattgagttgaaaagaggtcattttaca
gacttagacaatcagattcgtaataatgatatacctgaaagaatgcaactacgtgaagtt
ccagttacacctgtacctgaaggttctgatgaattagacgatgaagcagactggatttac
aaacaagcattttgcaaaccaactattactacacaagaaaacaaaggtggtgttgatcct
cgacttcaatccaagaaaggacctcaaactatcggaaaaattaaaaaagcgttagacttc
atgcggaatcaaaactttgaagttccttttttagcatattacagaaaagaatatgttgaa
cctgaacttgatatcaatgctttatggagagtttaccatttcgatgctaaatggtgtcaa
ttgaaatctcgcaaaaccatgctaattgaattattagaaaaaatgcgaaattatcagatg
gaaatgttaatgaaggatacaaatgcccctatgccagatcatattcgcattatcaaggat
gaagatattgataaattgcgtgcagtacaaacaaatgaagaactaaaagatattcaaggc
cattttatgttgtactatgccaatgatgtccccgcgatgcaagaatgtgctagaaaaaaa
tctagagaatctaaaataaaagctagagaacttagggaagaaagaagaaaacttgcaata
gaggctggtgaagatgtacctgatgatgatgaagatgatggtaatttagacgatgatgat
tcaaacgttgaaactgttaaacccgcaagtagttcgggaccttatactatgtgcctaaaa
tctggacttgctgggtttgcaaaacgttttggtttaaaaccggaacattttgctgcaaat
gtccgtgataattatcaaaggcatgaagtagatcaagaatctgtagatccttataaactt
gccggcgaatactgtaatgagttattaaaaacccctgatgaagttttaaaggctggcaaa
tatatggtagcatgtcaattatctcgagagccactcataaggaaatgtttgcgtgagact
ttctttgatcgagctaaaattaatattgtaccaaccaaacgaggaatcaaagaaattgat
gaaaatcataattgttattcaatgaagtacattagacgtaaaccagtgagagatttagta
agagatgattttttaaagttacaaatggcagaagatgataaattgcttactatttcgttt
gatgaagaagtagacggtctaggttctcttccatatatagaagaagtcaaacagctatat
ataagagatgaatttagctcaaatgtacaacaatggaatgacgtgagacgtgaatgtgtt
gatttagcttatagaaaattattaatgcctgaaatggtaaaagaactccgacgaagtcta
ctagctgaagctaaagagcatatattaaaatcttgcaaacataaattatcaaattggctc
gctataggtccatataaaccagaagtggatgaagatgatgacgactgggatacaagcaaa
ggcattagagttatgggattagcttattcgcctgatcatgaacaggcatcatttgcatgt
attttatcaactgacggtgaggttgtcgatcatctacgtttgccatatattatgaaaaga
ccgttcaatgatgatgtaaaagctaaaagagatggagatttcaatcatataaagaacttt
atactctttaaaaaaccccatgtcatagttcttggagcagaatctagagatgcattgtgg
ttagttagagatatcaaagcagttgttgaccaactagtagttgatgaacaatttcctcaa
atacaagtcgaaattttagataatcatctagctagaatttatgccaattctattaaagga
gaaaatgaattcagagactatccacaactgttacgcgaatccatctctttagggcgtaga
atgcaagatcctttagttgaattttctcaattgtgttcaacagacgatgaaatattatgt
cttcgctatcatcagtatcaagaagtactgaatcaagaagaattacttgaaggcttatat
caagaatttataaatcgtactaatgaagtaggtgttgatataaacgaagtggttcaacga
gtttatgcacccaacctattacaatttgtctgtggtttaggacctcgtaaagctactgca
ttaattaaactaatgaaacagacaaatcaacgattagaaaaccgaacccaattagttact
gcatgtcatatgggtcctaagatatttataaattgtgctggatttattaggattgatacc
aactctttgggtgatagtactgaagcttatgtagaagttttagatggatctagagtacat
ccagaaacatatgaatgggccagaaaaatggcagttgatgctttagagtatgatgatgaa
gaagcaaatccagcaggagctctagaagaaattttagatgcaccagaaagactaaaagat
ttagatttagatgcatttgctgaagaattagaaagacagggttttggtaataaaagtatc
acactttatgatatacgccaagagttaaaccaccgttataaagatattagagtagcttat
aaacctccaaattctgcacaattattcgaactactaactaaagaaacccaggaaacattt
tttgttggaaaaatggttttagctactgttgctggaattgcacgtagaaaaccacaaaat
gatcaacttgacaaagcaaatccagtgagaaatgatgaaactggcttatggcaatgtcca
ttttgttttaagaacgacttccttgaattatcagatgtatggaaccattttgatgctggt
ggttgccctggtcaagcatcaggaattcgtataagattagataatggtataaktggcttt
atagcaatgaaaaatttatcaaatacccatgtagccaaccccgaagatcgagttcgtttt
aatcaggcaatacattgtaggattatcaaaattgaaccagatagattttcatttgaagct
acttctaaaagctctgatttaaaagatcaagaacaccattggcgtccccagaaagatcct
tattatgatcatgaaactgaaagcagacaacgaaaaactgagttagacaagaataaaata
aaaaacgctcagacatatattaaacgtgtaattgtgcacccatgtttccacaatgtatct
tttgcagaagctgttaaattattgaataactctgaccaaggagatgctattattagacca
tctagcaaaggtgctgaccatttaactgttacttggaaagtagctgataatgtttaccaa
cacatagacataacagaaaaaggcaaagttaatgctttttcattgggacgttcactttgg
attggtactgaagaatttgaagacctagatgaaattattgcacgtcatatcactccaatg
gcaagcaatgctagagaattattacgttttagatattatcgtgatacagatggaggtaat
attgaaaaagccgagcaaatacttagagaagaaaaaactaataatccttcaaaaatccat
tacattgtatctgtatcacagaaatatgcaggcaaatttcttctatcgtgtttacctast
cgtagatcgaaacatgaatacataactgttacaccagaaggataccgtttccgtagccaa
aattttgattctattggatctttattccgatggtacaaagaacatttccgagatgctaca
cctcatgtaacaccaataacgtctcgatctgctggacaaacttatggaccttctccgcat
acagaaccttcgccaatgaatcgcagtcatagtagccactcaaatgctacacctcaatat
tcccaatctcctcatgcatcatacaacaacatgcagcaatctgcatataacactccatac
acaccatcggggcagactccttaccttggcaattatgctactcctcgttatagtgctgct
caagctccagttcatgatggtgtgtttcttcatcctagctccgtcacaccaattgttcaa
agtagtccgaaaccatctccttctaaaccacctgtacaatctgcagatccaaatgattgg
cgtcgaatggctgaagaatgggcaaaagctaaacaacgaggtgatggaggattttctaca
cccatgtctgacggaggaggacggcacacacctcgtagcagatacaacaatcatcgatat
aatatgaaccgagaaagagaaacaagtataccacgcagcgatgctccatcacctacccca
agtgcttcatcatacggatacaactctccagcaccatcaaagacctacaaaagtagttat
ataacatcttcacataactcatcaaagtcaccccgaggcccatcgtctaattctggtaca
ccatatgatccatttacaatggatcctggacaagattcacctggagtatatgcttcatca
tcccgttcagtacgcaatgatgaaaatgatccagacttgagatatgcgtcgcctggatca
agatggactccacggtctggtcgatcaactccccataccattaatagcccaagatcaatg
gttgaatcgtctatgggcgataatacaccactgtatgaagactaa
DBGET
integrated database retrieval system
