Diuraphis noxia (Russian wheat aphid): 107168136
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Entry
107168136 CDS
T04900
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107168136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnx03019
]
107168136
Messenger RNA biogenesis [BR:
dnx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107168136
mRNA degradation factors
3'-5' decay
Pan complex
107168136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
107168136
NCBI-ProteinID:
XP_015372932
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MFALGTESGNAVTNDSIRSNNPFLDFRRIILSQQEDQSSKMDPMTLVTQYNLLQNGPPEE
SKLATYMKRQNNSXPQSTLYSTLSKNYSNLDINQSSLSMKKASIATVDFVPRNLAGSLNN
TDVSSIYAKDKSQPIQAYQKNVNGTTYFYPPDTNGTNQPNGNIFDDPSGYLPMPSVESPT
SSLYAQDDLRRDLLHRNALSIASLDSDQWPDLPETVEDYHDVYPLDIYGHSSKILTYNTS
TYRATYSKNGEKCCLKRIHGFRLTITKYAPLIEAWKKINHANIVQLKDVFITKAFNDTSL
VFVFNYHPDSESLQTRHFSSNEIMNGYNDPFSSDPNAPRPYSHTKNAILRHQHSNGLLSE
NTLWNYAIQLSGALRAIHGSGLALRGLCLNRVLVTGHVNTRARLRINCVAITDILLNDMA
SSNMIGHFQQEDLTEFGKLLLALACRSLIAVHQDNLATSIDLMARSYSSDIRNLIRYLLS
SQRRHITELMPMIGARFYTQLDAAQNHSDNLENELSKEMENGRLFRLLVKLGSINERPEF
NLDPAWSETGDRYMLKLFRDYLFHQVTEDGRPWLDMSHIVQTLNKLDSGSSDTICLYSRD
EKTILVVSFQELKHCLEQSYCEIASVAASDDHIKAE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcactgggaacagagagtggtaatgcagtaaccaacgacagtattagatcgaac
aacccttttttggacttcagacgtataattttgtctcaacaagaagatcaaagttcaaaa
atggatccaatgactctagtgacacaatataatttattgcaaaatggtcctccagaagaa
tcaaaacttgctacttatatgaaacgacaaaataactcaycacctcaatcaacactgtac
tcaacattatcaaaaaattattctaatttagatataaaccagtcctctttatcaatgaaa
aaggcatctatagcaactgtcgatttcgtacctagaaatctagctggttcattaaacaat
actgatgtttcttcaatttacgctaaagacaaatctcagcctatacaagcatatcagaaa
aatgtcaatggtacaacatatttctatcctccagacactaatggtactaatcaacctaat
ggtaatatctttgatgatccatctggatatttaccaatgccatcagttgaatcaccaaca
tcttcattatatgcccaagatgatttaagaagagatttattgcatagaaatgctttatca
attgcctcactagactcagaccaatggccagatttaccagaaactgttgaagattatcat
gatgtttatccactcgatatatatgggcactcatctaaaatattgacttacaatacatcc
acttatcgagcaacctattctaagaatggagagaaatgttgtttaaaacgcattcatggt
tttcgattaacaattacaaaatatgctccattaattgaagcttggaaaaaaattaatcat
gcaaatattgttcagttaaaggatgtatttataacaaaagcttttaatgatacttcatta
gtctttgtttttaattatcatccagattctgaatctttacaaactcgacatttcagttct
aatgaaataatgaatggttataacgatccatttagttctgatccaaacgcaccacgacct
tatagccacactaaaaatgcaattttaagacaccagcatagtaatggacttttatctgaa
aatacactatggaattatgcaattcaacttagtggtgcactacgagcaatacatggatca
ggattagctttacgaggtctttgtctaaatagggttttagtgacaggtcatgtaaatacc
agggctagacttcggatcaattgtgtagctataacagatattttgttaaatgatatggcc
agttcaaacatgattggtcattttcaacaagaagatttaacagaatttggtaagctttta
ttagctctagcttgtcgatcccttatagctgttcatcaagataatcttgctacttctatt
gatttaatggcacgctcttacagtagtgatattcgtaacttaataaggtatttactgagt
agtcaaagacggcatattacagagctaatgccaatgataggagctagattttacactcaa
ctggatgctgcgcagaatcactcagacaatttggaaaatgagttatctaaagaaatggaa
aatggtcgtttgtttcgattgcttgtgaaacttggatcaattaatgaacgacctgagttt
aatttagatcctgcgtggtcagaaactggtgatcgatatatgttaaaactatttagggac
tatttatttcatcaagtgactgaggatggacgcccttggctggatatgtcgcacatagtt
caaactttaaataaactcgattctggatcatcagatactatttgtttgtattcgcgtgat
gaaaagaccatattagtggttagctttcaagaactgaaacattgtttagaacagtcatat
tgtgaaattgcctccgtggctgcgtccgatgatcatattaaggctgaataa
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