Diuraphis noxia (Russian wheat aphid): 107168427
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Entry
107168427 CDS
T04900
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx04512
ECM-receptor interaction
dnx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107168427
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107168427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dnx04147
]
107168427
00536 Glycosaminoglycan binding proteins [BR:
dnx00536
]
107168427
Exosome [BR:
dnx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107168427
Glycosaminoglycan binding proteins [BR:
dnx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107168427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107168427
NCBI-ProteinID:
XP_015373317
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MPRLSLLRWRQFALFAYLFTTVSTQWNPTWNSNQTNLNDPYYGDQEVKRYTGDSRYAISN
QRGNSTNCTPKCFAEKGSRGPPGSTGLPGPQGIQGYQGLEGLPGPVGDKGDIGPIGVRGP
KGDRGKTGIPGFPGISGIPGQMGPQGIPGIPGLDGCNGTDGNPGLPGLPGVIGPRGYQGI
TGEKGQKGEAAQTSIHNKGQKGEPGLDGDRGLPGNPGIQGIQGPIGLTGEIGIKGNRGVP
GLKGEKGNMGLGYEGLKGEKGHKGERGPPGPPVPNSSLVASNNTTVGPTGEPGEKGNPGE
NGEPGMKGEPGMIGDPGNPGEVGEKGEKGLVGTPGPRGRDGYHGPAGPVGQKGDRGIDGL
NGLPGRPGLKGEPGLDGAPGAAGLRGPPGQPGGGKGRPGLPGPQGPRGYPGPTGPKGLDG
IDGLPGLPGPKGNIGGQGVPGSIGLEGLQGEKGTKGEPGLTGLPGESGQRGFPGAQGPPG
PRGPVGEKGASIVGPKGYDGVDGRDGEKGLKGERGYQGERGSPGDSPTGIAGPQGVKGAT
GEKGEDGRPGIPGIPGRDGPKGEIGGRCQGCSPGEKGSKGEPGLYGTPGLKGPRGPPGER
GYPGEPGADGLIGPTGEPGAPGVDGAQGEVGPPGEKGAAAIIPASWTYSQKGETGPRGDP
GRDGLRGADGLNGPEGKPGIDGLPGINGEKGDRGFPGSDGIPGQPGYPGSKGEKGISIKG
EQGMLGRPGLKGDKGEPGLTGQKGTPGNCELMNIEKIQKGEPGSQGEKGEPGPPGVDGYP
GEKGSIGPIGLNGPVGPRGIPGLVGPRGLPGIRGEKGNTGPMGFIGEPGRDGERGYPGLP
SPKGVKGEPGIPIVGPKGSEGLPGEKGERGLQGPFGRPGVSGEPGTPGSPGEKGSQGEPG
LEGLTGQPGAKGEPGPVGPSGPPGNDGLPGLDGPKGETGLPGEPGRQGLQGFPGPKGDTG
PTGPEGPKGFAGFRGMPGAVGKPGIDGMPGEKGDKGDTGLPGISGPPGEDGLPGPQGYRG
EKGDIGFPGPPGETGLRGLPGPMGERGPLGLPGLKGEPGPVSEKGQKGEPGESGLRGPQG
QPGIDGLPGMKGDTGFPGIGLQGWSGQKGEPGTPGYDGRPGNDGEKGVAGVAGVPGMKGD
TGPRGVPGTPGPPGMDALDGIKGNAGFPGIPGLEGEKGDIGYPGIPGLDGEKGERGLPGL
IGPTGLKGAMGDKGDRGLPGPAVDIKGDKGEPGPPGFPGIPGPVGPAGLNGPPGIEGEKG
DMGLPGATGYPGPSGPRGEKGNIGPQGLPGIPGTTVKGEKGLPGLLGKHGRDGLPGLSGE
KGDKGLSGLPGLPGPVGPVGFPGSPGDVGAIGPPGFPGSPGLDGLPGIPGKDGPPGLMGF
KGEPGNPAPYGEKGDKGDAGFPGEPGYPGSKGDKGDRGYPGLEGIQGVQGLPGDKGIAGV
PGKIGMPGISGIKGDKGEPGLAPPPGSKGERGLPGPVGWPGEKGDRGIDGLPGLEGLKGN
IGVPGLNGPVGPPGSEGEKGEPGIDGLPGLQGPPGLRGNDGPAGKSCESEPNYSTGILLV
KHSQSSSIPQCEPNHAQLWDGFSLLYIEGNEKSHNQDLGFAGSCIRKFSTMPFLFCDFNN
VCNYASRNDKSYWLSTNAPLPMMPVEENDIQKYISRCVVCEAPANVIAVHSQASTIPDCP
NGWEGLWIGYSFVMHTAAGAEGGGQSLASPGSCLEDFRATPFIECNGARGTCHYFANTMS
FWMATIDPDEQFTSPKRQTLKKDDSRTRISRCQVCIRTT
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggctcagcctgctccgttggcggcaattcgcattattcgcctacttatttacg
acagtatcgacgcaatggaatccaacttggaattcaaatcaaacaaatttaaatgatccg
tattatggagatcaagaagtaaaacgttatacaggtgacagtagatatgccatttcaaac
caaagaggcaactcaacaaattgtacaccaaaatgtttcgcggaaaaaggaagccgagga
ccaccgggctcaacgggtcttcctggtcctcaaggaatacaaggatatcaaggtcttgaa
ggtcttccaggtccagtaggggataaaggagatatcggtccaataggggtacgaggacca
aaaggagacaggggtaaaacgggtattccaggattcccaggtataagtggaatacctgga
caaatgggcccacaaggaataccaggtatccctggcttagacggatgtaatggaacagat
ggaaatccaggccttccaggattaccaggagtgattggacctcgtgggtaccaaggaata
actggtgaaaaaggtcaaaaaggagaagctgctcaaacatcgattcataacaaaggtcag
aaaggagagcctggtttggatggagatcgagggctacctggaaatcctgggatccaagga
atacaaggtcctatcggacttactggagaaatcggaataaagggaaatcgtggagtcccg
ggtctaaaaggagaaaagggaaatatgggacttggatatgaaggtcttaaaggagaaaag
ggtcataaaggagaacgtggtccaccaggaccacctgtgccaaactcatcacttgttgca
agcaataatacaacagttgggccaactggtgaaccgggtgaaaaaggaaatccgggcgaa
aatggcgaacctggaatgaaaggagaaccaggaatgattggtgatccaggaaacccaggt
gaggttggtgaaaaaggagaaaagggtttagttggaactccaggaccaaggggtcgtgat
ggttaccatggacctgcaggacctgtaggacaaaaaggcgatcgaggaattgatggcttg
aatggattaccaggacgaccaggacttaaaggagaaccaggattggatggtgcaccagga
gcagctgggttgcgaggacctccaggacaaccagggggtggaaaaggcagacccggtctg
cctggacctcaaggaccgcggggataccctggacctacaggtccaaaaggtttagacggt
attgatggtcttcctggtcttcctggcccaaaaggaaatattggaggtcaaggagtacca
ggatctataggcctagaaggtttacaaggagaaaaaggaacaaaaggagaacccggactt
acaggtttacccggagaatccggtcaaagaggttttcctggcgcacaaggtccacctgga
cctcgaggacctgtcggtgaaaagggtgcttcaattgtcggacctaaaggatacgatgga
gttgatggaagagatggtgaaaaaggtcttaaaggcgaacgtggttatcaaggcgaacga
gggtctccaggtgattctccaactggtattgctggaccacaaggtgttaaaggtgctact
ggggagaaaggtgaagatggaagaccagggattccaggaattccaggtcgagatggtcca
aaaggtgaaattggtggaagatgtcaaggctgtagtccaggagagaaaggtagtaaaggt
gaacctggattatatggtactccagggttgaagggaccgcgtggaccaccaggcgaaaga
ggatatccgggtgaaccaggtgctgacggactaatcggaccaactggtgaacctggtgct
cctggagtagatggtgctcagggtgaagttggtccaccaggggaaaaaggtgcagcggca
ataattccagcaagttggacatattctcaaaaaggagaaactggtcctcgtggagatcct
ggaagggacggtttacgaggagcagatggactaaacggacctgagggaaaaccaggtatt
gatggattacctggaattaatggagaaaaaggcgatagagggtttccaggttctgatgga
ataccaggacaaccaggatatcctggatccaaaggagaaaaaggcattagcattaaagga
gaacaaggaatgctaggaagacccgggttaaaaggagataaaggagaacctggattaaca
ggtcaaaaaggaactcctggtaattgcgaactcatgaatattgaaaaaattcaaaagggt
gaacctggaagtcaaggggaaaaaggcgaacctggtccaccaggggttgatggttatccg
ggagaaaagggatcaataggaccaattggtcttaatggaccagtaggaccaagaggaatt
ccaggtcttgtgggccccagaggactaccaggtattcgtggagaaaaaggaaatactgga
ccaatgggtttcattggagaacctggacgtgatggagaaagaggatacccaggattacct
tcacctaaaggtgtcaaaggtgaacccggtatacctatagttggaccaaagggttcagaa
ggacttccaggcgaaaagggtgaaagaggtcttcaagggccatttggaagaccaggagtg
tctggtgaaccaggaactcctggatcacctggtgaaaaaggaagtcaaggtgaacctggt
ttagaaggattaactggacagccgggagctaagggcgaacctggccctgtaggaccgagt
ggacctcctggtaatgatggcctacctggcttagacggtccaaaaggtgaaactggatta
ccaggtgaaccaggaagacaaggactgcaaggattccctgggccaaaaggtgatactgga
cctacaggtccggaaggtccaaaaggatttgcaggatttagaggaatgccaggtgcagtt
ggaaaacctggaatcgatggaatgccaggagaaaagggtgataaaggagatactggatta
cctggaattagtgggccaccaggagaagatggtttgccaggaccacaaggatatagaggt
gaaaaaggtgatataggttttcctggacctccgggtgaaactggattacgtggtctacct
ggtcctatgggtgaacgtggtcctttaggattaccgggtttaaaaggtgaacccggtcca
gtatcagaaaagggacagaaaggagagcccggtgaatccggtctcagaggacctcaagga
caaccaggaatagatggtttacctggaatgaagggagacactggattcccaggaattgga
ttacaaggatggtcaggacaaaagggagaacccggtacaccaggatatgatggacgacct
ggaaatgatggtgaaaaaggagttgctggagtcgctggtgttccaggaatgaaaggtgac
acgggacctcgtggagtcccaggaacaccaggacctccgggaatggatgctttagacgga
ataaaaggcaatgcaggtttcccaggaattcctggactagaaggagaaaagggtgacatc
gggtaccccggaataccagggttagacggagagaaaggagaacgaggcttaccagggtta
attggaccaactggattaaaaggagcaatgggagataaaggtgatcgaggattgccaggt
cctgcagttgatattaaaggagataaaggtgaaccagggccaccaggttttccaggaata
cctggtccagtaggacctgctggacttaatggtccacctggtatcgaaggagaaaagggt
gacatgggattaccaggtgcaactggttatccgggtccttcaggaccaagaggcgaaaaa
ggcaatatcggtcctcaaggattgccaggcatccctggaacaacagtcaaaggagaaaag
ggattaccagggttattgggtaaacatggcagagatggactacctggtttatcgggagaa
aaaggtgacaaaggactatccggattaccaggattacctggtcctgtggggccagttggt
ttccccggttcaccaggtgatgttggagcaattggaccaccaggtttccctggatctcct
ggattagatggacttccgggtataccaggcaaggatggtccaccaggattaatgggattc
aaaggagaaccaggaaatccagcaccttatggtgaaaaaggagataagggcgatgcaggt
tttccaggggaaccaggttatcctggatctaaaggtgataaaggagatagaggatatcca
ggacttgaaggaatacaaggtgtacaagggttaccaggtgataaaggaatagctggagtt
ccgggaaaaataggtatgcctggaatatctggaattaaaggcgataaaggagaaccaggt
ttagcacctccaccaggatccaaaggagaacgtggattacctggacctgttggttggcct
ggtgaaaaaggagatcgtggcattgatggcctccctggtttggaaggattaaaaggaaat
atcggtgttcctggtttgaatggtccagttggtcctcctggttcagaaggtgaaaagggt
gaaccgggaatagatgggcttccaggcttacaaggaccaccaggtttacgaggaaacgat
ggacctgctggtaaatcctgtgaatcagaaccaaattattcaacagggattctattggta
aaacatagtcaaagttcttcgatacctcaatgcgaaccaaatcacgcacaactttgggat
ggatttagtttgttatatattgaaggaaatgaaaaatcccacaatcaagacttaggattc
gccggttcttgtatccggaagttctcgaccatgccatttttgttctgtgacttcaacaat
gtatgcaactacgccagtagaaacgacaagtcgtattggctcagcacaaatgcaccgtta
ccgatgatgccagttgaagagaatgatattcaaaaatatatttctagatgtgtcgtatgc
gaagctcctgctaacgtaattgctgtacacagtcaggcgtcaacaattcccgactgtccc
aatggttgggaaggtttgtggattggatacagttttgtaatgcacacggctgcaggtgca
gaaggtggtggtcaatcactagccagtcccggttcatgtctggaagattttagggcaacg
ccgttcatcgagtgtaacggagcgcgaggaacatgtcattatttcgccaacaccatgagt
ttttggatggcaacgattgaccctgatgaacagttcaccagccccaagagacaaaccttg
aagaaagacgatagtcgcactcgcatcagtagatgtcaagtgtgcatacgaacaacatag
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integrated database retrieval system