Diuraphis noxia (Russian wheat aphid): 107169094
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Entry
107169094 CDS
T04900
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107169094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107169094
03019 Messenger RNA biogenesis [BR:
dnx03019
]
107169094
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107169094
Messenger RNA biogenesis [BR:
dnx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107169094
U7-dependent histone pre-mRNA processing factors
107169094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
107169094
NCBI-ProteinID:
XP_015374218
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MRVERSQSPTEQMTSILNEAAVAPDENTKLDLLLKAKEVLLYQEPKFLPQFINDVIAYQN
DHSSTIRKFVVAFIEECCNKDKSNVCVTLPNLLMLLKDRSLVVQKRVVQAASNIYRAGLQ
WISMIDLPSSDLSNVWQDLSNLKSHVINMIDNDNEGIRTQVIKFMETVILVQTYKGEGGV
DRENDMSLEDIPLTLKVTRRRRLEDEAKVLFDLLSRFCHSGNVGCANLMTCMGSLTLIAK
FRVSFIEKVLTTLETLTKNIPNSLTPSQSTSVQKNLKLQFLSLLRLPASTEHQQTIGRLL
LDIGASNQEIMKALQVLSKNEDSKKLLRSLKRKNDDKDDKKLDKDDIPEKKRCTEGTPSD
RHINSIKTWVLEKLSPESITNLIMTFMPKLPSKMPSAFVTNYTPIAAAGTDSHIKHVAKL
LAAQICGSDIVIPDLKYITLNDDESLEGVKEEIIKMEEEDILLAQPAELNTNNCQIDPTE
AQELSNDALLRVLDTSKIVLSKKFKEVHIKAITKVAVMCSDNFRDMILDYINLDIPKNMN
LCLSWLYEEYSVSQGFIKLPTAFRNTLTSEQNYSTVLCSLIRGALNIGDLKEKEDAITTF
YFESPFITDDAVDILKEICGDHAFGLFILNELVTKRPPRQLVYLNALLFFTSHKNDKLRE
IALNFISKLYKNKDLKNIIEEYATFYLGFLRLQLPPDVLFGHETGRLVKSEVWDEDSTTA
CLYLYFMLMADNYELIHELASVFSNSQGEVKRSIIKLLPQPIQNMPMNSAEMFRLLEDIP
KGSETMITRVLHTITEKEIPSTELVSRVKKLYENQIVEVRFLVPIISGLDKKYILNVLPQ
LIKLNPNVVKEVFNRILGINYSNSNPPVSPAELLIALHTMESDPNDLKYIIKATSLCFAE
KTVFTQEILAIVMQNLMDVNPLPTLLMRTVIQSLTTYPRLIAFIMNILQRLILKKVWHQK
TQWEGFIKCCQKTKPNSFQVLLQLPPEQLEDVLFQCPEMRKSLLDHVLSFTEVQRSHIRQ
AIMDVIFGKKMEVPMYQNLKVKCEPVSNTNNQQVLVSKQEKLSPEKISNMKEDELRPPGD
CDEDSINGI
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtagaacgtagtcaaagccctactgagcagatgaccagtattttaaatgaagct
gctgtggctcctgatgaaaatactaaacttgatttactacttaaggctaaagaagtgctg
ttgtatcaagaaccaaaatttttaccacaatttattaatgatgtaatagcgtatcaaaat
gaccatagttcaacaataagaaaatttgttgtagcgttcatagaagaatgctgcaataaa
gacaagtcgaatgtatgtgtcacattaccaaatttattaatgttactgaaagatcgatca
cttgttgtccaaaaaagagtggtgcaagcagctagcaatatatacagagctggattacaa
tggatatcaatgattgatttacctagttctgatttatcgaatgtatggcaagatttatca
aatttaaaatcgcatgttattaacatgattgacaatgataatgaaggtattcgtactcaa
gtaattaaattcatggaaacagtaatacttgtacaaacatacaaaggtgaaggcggtgtg
gatcgtgagaatgatatgtcacttgaagatatacctttaactctcaaagttactcgccgt
agaagacttgaagatgaagcaaaggtattgtttgatcttctgtcaagattttgtcattct
ggtaatgtaggctgtgcaaatttaatgacttgcatgggatcattaacactgattgccaaa
tttcgtgtgtcatttattgaaaaagtcttaaccacattagaaacattaactaaaaatata
ccaaattcattaactccgagtcaatcaacctctgttcagaaaaatctaaagttacaattt
ttaagtttattgcgtctccctgcttcaactgaacatcagcaaacaattgggagactgtta
ttagatattggtgcttccaatcaagaaattatgaaagcacttcaagttttgtcaaaaaat
gaagatagtaaaaagttattacgatccttaaaacgtaaaaatgatgacaaagatgataaa
aaactagataaagatgacattccggaaaaaaagagatgtactgaaggcacaccatcagat
cgacatattaattcaattaaaacatgggttcttgaaaaattatctccagaatccatcaca
aatcttattatgacattcatgcctaaattaccatcaaaaatgccctcagcttttgtaaca
aattatactccaatagctgcagctggtactgatagccacataaaacatgttgcaaaatta
ttagctgctcagatttgtggatcagatattgttattcctgatttaaagtacataactcta
aatgacgatgaatcattagaaggagtaaaagaagaaattataaaaatggaggaagaagat
atacttttagctcaaccggcagaattaaatacgaataattgtcaaattgatcctactgaa
gctcaagaactatctaatgatgctttacttagagttttagatactagtaaaattgttttg
tcaaaaaagtttaaagaagtgcacattaaagctataactaaagtggcagttatgtgtagt
gataattttcgtgacatgatactcgactatataaatctggatatcccaaaaaatatgaat
ttatgcttatcatggttgtatgaagagtatagtgtaagtcaaggatttattaaactgcca
acagcattcagaaatactttaacttcagaacaaaattacagtactgttttatgctcatta
atcagaggggcattaaatattggagatctcaaagaaaaagaagatgctataacaactttt
tattttgaaagtccatttattactgatgatgctgtagatattttgaaagaaatttgtggt
gatcatgcgtttggtcttttcattctcaatgaattggttactaaacgtcctccaagacaa
ttagtgtatttaaatgcacttcttttcttcacttcacataagaatgataaacttcgagag
attgcgttgaattttatcagtaaattgtataaaaataaggatttgaaaaatattattgaa
gaatatgctactttttatttgggattcttaagattacaacttccccctgatgtactcttt
ggtcatgaaacaggccgattggtcaaatctgaagtgtgggatgaagactcaactacagct
tgcttatacctatatttcatgttaatggccgataattatgaacttattcatgaattagcs
tctgtattttccaactcgcaaggagaagtaaaacgttcaatcataaaacttttaccacaa
cctattcaaaatatgccaatgaattcagctgaaatgtttagacttcttgaagatatacca
aaagggtctgaaacgatgataactagagtattgcatactattactgaaaaagaaattcca
tcaacagagttagtatcaagagttaaaaagttatatgaaaatcaaatagttgaagtacgt
ttcttggtaccaataatatctggtttggataagaaatatattttgaatgtcttacctcaa
ctaataaaattaaatccaaatgttgtaaaagaggttttcaataggattttgggcattaac
tattctaactcaaatcctcccgtcagtccagctgagctattaattgcattacatacaatg
gagtctgatcctaatgacctcaaatacattattaaagctacatcattgtgttttgcggaa
aaaacagtattcacgcaagagatattggccatcgtcatgcagaatttaatggatgtaaat
ccattaccaactttattgatgcgtacagttatacagtctttaacaacttacccccgtttg
attgcttttataatgaatattctccagagacttatactaaaaaaagtatggcaccaaaag
acacaatgggaaggattcataaagtgttgtcagaagacaaaacctaatagttttcaggtg
ttgttacaattgccaccagaacagctggaagatgtcttatttcaatgtccagaaatgaga
aaatcattgttagatcatgtacttagttttaccgaagtacaacgctcacacattcgtcaa
gcaattatggatgttatatttggaaaaaaaatggaagtaccaatgtatcaaaatttaaaa
gtgaaatgtgaacctgtaagcaatacaaacaatcaacaagttttagtgtctaaacaagaa
aaactatcacctgaaaaaatatctaatatgaaagaagacgagcttaggcctccaggtgat
tgtgatgaagactcaattaacggaatttag
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integrated database retrieval system