KEGG   Diuraphis noxia (Russian wheat aphid): 107170924
Entry
107170924         CDS       T04900                                 
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
dnx  Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dnx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107170924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dnx03019]
    107170924
   03041 Spliceosome [BR:dnx03041]
    107170924
Messenger RNA biogenesis [BR:dnx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107170924
Spliceosome [BR:dnx03041]
 Complex B
  Other components
   Prp19-related factors
    107170924
 Complex C
    107170924
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_8 TPR_12 TPR_15 TPR_2 Mad3_BUB1_I NRDE-2 RPN7 TPR_10 DHR-2_Lobe_A SNAP MMR_HSR1_Xtn PPR
Other DBs
NCBI-GeneID: 107170924
NCBI-ProteinID: XP_015376632
LinkDB
Position
Unknown
AA seq 853 aa
MRMELATSKSNVNVIQPDAVIFETYWLNKRDVEFEQDILRNPNSVKCWMRYIDNYKLGPY
KKVCVLYERALKQLPGSYKLWHCYLKIRRKYLKTTDNPDYEEVNNVYERALVYMNKMPRI
WIEFCTFMLKQPKLTVARRLFDRALRALPITQHXRIWPLYLKFIKESHDPEVAVKIYRRY
LKLFPEDSEDYIEYLTTSGRLDEAAIRLSEIVNNDSFVSKHGKSKHQLWNELCNLISKNP
LEIKSLNVDAIIRSGLRRYTDQLGHLWNSLADYYIRSGLFERARDIYEEAIQTVTTVRDF
TQVYDAYAQFEELSLQKRMEVVHANQNSTEKDDCEIDLRMARLENLIERRLLLLNSVLLR
QNPHNVKEWLKRVQLYEGNDVQVINTFTEAVETVDPQKAVGRLHTLWVEFAKFYEKAKQL
EEARLVFKKAVLVSYIKVEHLASVWCEWVEMELRHDNFNEAMRLMRQATSIPSRKVAYHD
DTETVQIRLHKSLKLWSLYLDMEESFGTVKSTMACYDRVIDLRIATPQTIINYGLFLEEN
NYFEEMFKAYEKGVALFKWPNVFDIWNTYLTKFLDRYGGTKLERARDLFEECLEGCPPQF
AKCIYLLYAKLEEKHGLGRRAMAVYERATEAVLPEEKFEMFNIYIKKAAEISGIPKTREI
YMKALEVLTNNNARSMYLRFAELETKLGEIDRARAIYSHCSQICDPRVTEEFWQTWTSFE
VAHGNEDTLREMLRIKRSVQAMYNIQVNMMSAQMMSVISVEPEKSGMKLLEEKALENKEK
PLEPIKFVLGSEQDRLPNIKVSNPDEIEFSDDEDEEDGDKENEXNDDEDMPTKKDVPAEL
FGNLGAFTEKNTE
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgagaatggaactcgcaacgtcgaaaagcaacgtcaacgtgatacagccagatgctgtg
atattcgagacgtattggttaaataagagagatgttgaatttgaacaagatatactgaga
aatccaaattctgtgaagtgttggatgcggtacatagacaattacaaactgggcccgtac
aaaaaagtatgtgtactatacgaacgcgccttgaaacaactgccaggcagctacaaactg
tggcattgttacttgaaaatacgtcgaaagtatttaaaaactacagacaaccccgattac
gaagaagtgaacaatgtttacgagcgagcattggtgtacatgaacaagatgcctcgcatc
tggatagagttctgcacattcatgttgaaacagcctaaactcactgttgctcgtcgtctc
tttgatagggctcttagagctttaccaatcactcaacattmccgaatatggccattgtat
ttgaaattcataaaagaaagtcatgacccagaagttgctgttaaaatatataggagatat
ttaaaattatttccagaagattcggaagattatattgaatacttgaccacatctggacga
ctcgatgaagctgctattcgtttgtctgaaattgtaaacaatgacagttttgtatctaaa
catggtaaatctaaacatcaactttggaatgaactttgtaatttaatatcaaaaaatcct
ttagaaattaagtcattgaatgttgatgcaattatacgtagtggtttaagacgttacact
gaccagcttggtcatttgtggaactctttagctgattattatatacgtagtggattattt
gaaagagcaagagatatatatgaagaggctattcaaactgttacaacagttcgtgatttt
acccaagtgtatgatgcttatgcacaatttgaagagttaagtttacaaaaacgaatggaa
gttgttcatgctaatcaaaatagtactgagaaagatgattgtgaaattgatttacggatg
gcaagattggaaaacttgattgaaagaagattactacttttaaactcggtacttctaaga
caaaacccccacaatgttaaagaatggttaaagcgtgtacagctctatgaaggaaatgac
gttcaggtaataaatacttttactgaagctgtggagacagttgatcctcaaaaagctgtt
ggtagattacatacactttgggtggagtttgctaaattttatgaaaaagccaaacaactc
gaagaagcacgcytagtatttaaaaaggctgttttagtgtcatatattaaagttgagcat
ttagctagtgtctggtgtgaatgggtagaaatggaattgagacatgataactttaatgaa
gcaatgagactaatgcgacaagcaacttccataccttctcggaaagtagcctatcacgat
gacacagaaactgttcaaatacgattacataaatcrttaaaattatggtctttgtatttg
gatatggaagagagttttggaacggtcaaatcaacaatggcttgttatgatcgagttata
gatttaagaatcgcaactccacaaactattattaattatggattatttttagaagaaaat
aactattttgaagaaatgtttaaagcttatgaaaaaggtgtagcattattcaagtggcca
aatgttttygatatatggaatacatacttaacaaaatttttggaccgttacggtggtaca
aaacttgaacgggcacgtgatctttttgaggagtgtcttgaaggttgcccaccacaattt
gctaagtgtatttatttattgtatgcaaagcttgaagaaaaacatggcttaggcagaaga
gctatggctgtttacgaaagagccactgaagctgttctacctgaagagaagtttgaaatg
ttcaacatttacattaaaaaagcagcagaaatatctggtataccaaagactagagaaatt
tayatgaaagccttggaagttttgacaaataataatgcccgttcaatgtatctaagattt
gctgaacttgaaacaaaattaggtgaaattgatcgcgctcgagcaatatactcgcattgt
agtcaaatttgtgatcctagggtaactgaagaattttggcaaacttggacctcatttgaa
gtagctcatggtaatgaagatactctccgagaaatgctaagaattaaacgaagtgttcaa
gcaatgtataatattcaagtgaacatgatgtcagcacaaatgatgtctgttatttcggtt
gaaccagaaaagagtggaatgaagttgttagaagaaaaagcattagaaaataaagagaaa
ccattggaacctatcaaatttgttttgggtagtgagcaagatcgtttaccaaatataaaa
gtatcaaatccagatgaaattgaattcagtgacgatgaagatgaagaagatggtgacaaa
gaaaatgaagawaatgatgacgaagatatgcctactaaaaaagatgtgcctgctgagttr
tttggtaacttaggagcatttaccgaaaaaaataccgaataa

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