Diuraphis noxia (Russian wheat aphid): 107171147
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Entry
107171147 CDS
T04900
Name
(RefSeq) putative ATP-dependent RNA helicase me31b isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107171147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnx03019
]
107171147
03036 Chromosome and associated proteins [BR:
dnx03036
]
107171147
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107171147
Messenger RNA biogenesis [BR:
dnx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107171147
mRNA degradation factors
5'-3' decay
Decapping complex
107171147
Chromosome and associated proteins [BR:
dnx03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107171147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
107171147
NCBI-ProteinID:
XP_015376864
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MLAANHNNSGINLNMPSKQLNRISFEGIDDAGWKAKLKLPPQDHRIKTSDVTSTKGNDFE
EFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDILARAKNGTGKTGAYSIPVLEQVD
PKLDVIQALVIVPTRELALQTSQICIELAKHLDIRVMVTTGGTNLKDDILRIYQRVHVII
ATPGRILDLLDKSIAKVDNCRILVLDEADKLLSQDFKGMLDHIISRLPAERQILLYSATF
PLTVKQFMDKHLHSPYEINLMEELTLKGVTQYYAFVQEKQKVHCLNTLFSKLQINQSIIF
CNSTQRVELLAKKITDLGYCCYYIHAKMAQAHRNRVFHDFRKGSCRNLVCSDLFTRGIDV
QAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIKPI
PKVIDPRLYVARPEDVDINEEMDLSK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgcaaatcacaataactcagggattaacctcaatatgcccagcaaacagtta
aacagaattagcttcgaaggaatagatgatgcaggttggaaggccaaacttaaacttcct
cctcaagaccacaggattaaaacaagtgatgttacttcaaccaaaggaaatgactttgaa
gaattctgtttaaaacgtgaattattaatgggtatatttgaaaaaggttgggaaaaacct
agtcctattcaagaagcaagtattcctatagcactttctggcaaagatatattggcaaga
gcaaaaaatggcacaggaaaaactggggcttattctatacctgtacttgaacaagtggac
ccaaaattagatgttatacaagcacttgtgattgtgcctacaagagaattagcattacaa
actagtcaaatatgtattgagcttgcaaagcacttggacattagggtcatggtgactact
ggtggtactaatcttaaggatgatattcttcgtatttaccaaagagtgcatgttataatt
gccactcctggaaggatattggatctcctagataaaagtatagccaaagttgataattgt
cggattttagttttagatgaggcagataaacttttgtcacaagattttaaaggtatgtta
gatcatattatttcaaggttaccagctgagaggcaaatcctcttatactctgccacattc
cctctgactgtcaaacagtttatggataaacacttacatagtccatatgaaataaactta
atggaagagttaaccttgaaaggagttactcaatattatgcatttgttcaagaaaaacaa
aaggttcattgtttgaacactttgttctcaaagcttcaaataaaccaaagtataatattt
tgtaattcaacacaacgtgtagagttacttgctaaaaaaattactgatctcggctattgt
tgttattacattcatgctaaaatggcccaagcacatcgtaatcgtgtattccatgatttt
agaaaaggatcttgccgcaatcttgtttgttctgatttatttacaagaggtattgatgta
caagctgtaaatgttgtgataaactttgattttcccaaaatggcagagacgtatttgcat
cgtattggtaggtcaggcagatttggacatcttggtatagccatcaatcttatcacctat
gacgaccgatttgcattgcaccgtattgaacaagaattaggcacggaaataaaacccata
cctaaagtaattgatccaaggttgtatgttgcacgaccagaagatgtagatattaatgaa
gaaatggaccttagtaaatga
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