Diuraphis noxia (Russian wheat aphid): 107172760
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Entry
107172760 CDS
T04900
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03440
Homologous recombination
dnx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107172760
03450 Non-homologous end-joining
107172760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dnx03032
]
107172760
03400 DNA repair and recombination proteins [BR:
dnx03400
]
107172760
DNA replication proteins [BR:
dnx03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
107172760
DNA repair and recombination proteins [BR:
dnx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
107172760
BRCA1-C complex
107172760
NHEJ (non-homologous end-joining)
MRX complex
107172760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_15
AAA_29
AAA_22
Mst1_SARAH
AAA_13
Motif
Other DBs
NCBI-GeneID:
107172760
NCBI-ProteinID:
XP_015378546
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MSTLESISIQGIRSYHPDEKQTLKFHKPLTLILGQNGCGKTTIIECLKYITCSDLPRNAN
KGGFVWDPKLSDHHTVKGNVKLSFYDTKDTRVVVSKTLESTQKQSSTSTKSLDQTISRKG
QSTSHKCADVDDVMCTYLGVSKSILKDVVFCHQEDSNWPLDEDKKVKEKFDSIFDVGKYD
KCIKQIQTEIKATHGDKRACNNNIQHFWKYREEARNKRATLESKKCSFEELQEKLESIEK
EMNPLEVRFQEILKTEENFFSLKNKLLTSEGNLNSIRLAIKDLKSLIKLEFKGNDSDLDE
ELENFNNNLLLKEEEKCQLNCLKDKAITNENKIQENISKEQVNLGRYQSEEKQNQNNINK
QNAKIIELGNEMKIVLPDITEFNRTEVISDLTNNLNSNNSKLESIQKEYRENEIKLQSNI
DSMRVEKAKLDQEIKIKEKQIWENTSEIQKFKKDIEQVRHSAEKLSDLQKLKVDVETKLN
MLRGSFNLDDVKTEINMKKGEKYKQNIKLEALEKEVQKLQLLSIVQAELDTVILNKTGIN
NKLKILKNKVNDVLKDLLGFIPQEKLKFEFTSFLDKLSDTIRCNRISIAEKQKQLTTLEA
NYNHTKDKLRTKQIELSNDENALSDMCQDQEYETILKEVNEKVEELQAQKGSVSTSGHLF
RRYIKNLEAQDPSCPLCHRCFGSVDEVTELINDLNMRVQKIPNELETTIGQLEILLEKQS
KLQQLRPTYTRISVLKQTEIPNIKDELERISNNLRKYRDELTKLSDENGKLETNETNAKS
IQSDIIMIDSFENDVKRYLKEEQRLATKMSESGSTRNLQEAISEKNHLKTTLNEICNILE
KKQHELNEYSENLHKLQMQQNKITNDELNIKSKMQDEKSVIDKLKDLQNLEATLSLELDN
AKETLEPVQEKLKTCINTFEETKKQQRSTIENKRKEIIILEKKIQEINNLQSSIDSYEKK
GWTLRIKETNNLLNSLIKEKMNYVEEQKNLQKQIDAINEYNANQEVKKIDLENNKKLRQK
SKEEIKCLSEINKFHEDVGTMDVDSLLNEKTNNRKKIQALFVEKNKSLGRKQELDNIIKH
ITEELKAIHFKNAEDIYLHEKVQLEILNRVEKDLTKYNKALEWAMNRFHKERMQSINSII
KKLWRDIYTGNDIDYIQIKTSSDDKPIHTDTIKKRVFNYRVIQIKNEVELDMRGRCSAGQ
KVLACLIVRMALAETFSKNCGILALDEPTTNLDESNIQSLAESLSEIITRRSSQKSFQLL
IITHDPNFLRKLSARDMVDTYYEVKRSNEGMSIVCEQDIKYLP
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtctacattagaatcaatatcaattcaaggtataagaagttatcacccagatgaaaaa
caaactttaaaattccataaacccctaacattgatcttagggcaaaatggttgtggaaaa
actactataattgagtgtcttaaatatattacgtgttcagatctaccgagaaatgcaaat
aaaggtggttttgtttgggatccaaaactatcagatcatcatactgttaaaggcaatgta
aaactttcattttatgatactaaagatacacgtgtagtggtttcaaagactttggaatca
actcaaaaacaatcatctacgtctacaaaatcactcgatcaaacaatttctagaaaaggg
cagagtacttcacacaaatgtgctgatgttgatgatgtcatgtgtacttatttgggtgta
tcaaaatcaatcttaaaagatgttgttttttgtcatcaagaagactctaactggccttta
gacgaagataagaaggtaaaagaaaaatttgattcaatttttgatgttggaaaatatgac
aaatgtatcaaacaaattcaaacagaaataaaggctactcatggagataaaagagcatgc
aacaataatatacaacatttttggaaatatcgagaagaagcacgaaacaaaagagctacc
cttgaaagtaaaaaatgtagttttgaagaattgcaggagaaactggagagtatcgaaaaa
gaaatgaatccattagaagtcagattccaagaaattttgaaaacagaagaaaattttttt
tctcttaaaaataaattattgacatctgaaggaaatttgaactctattagattagctata
aaggatttgaaatcattgattaagctagagtttaaaggaaatgattctgatcttgatgaa
gagctagaaaattttaataataatttgcttctaaaagaagaagaaaaatgtcaattaaat
tgtctaaaagataaagcaattactaatgaaaataaaattcaagaaaatataagcaaagaa
caagtaaatttaggaagatatcaaagtgaagaaaagcaaaatcaaaacaatataaacaaa
caaaatgcaaaaataattgaattaggaaacgaaatgaaaattgttctgccagatataaca
gaattcaatcgtacagaagtgataagtgaccttacaaacaacctaaattctaacaacagt
aaattagagtctatacaaaaagaatatagagaaaatgaaatcaagttacaatcaaayatt
gattcaatgagagtagaaaaggctaagttagatcaagaaattaaaataaaagaaaaacaa
atttgggaaaatacttctgaaattcaaaaatttaaaaaagatattgaacaagtaagacat
tcagccgaaaaattatctgatctacaaaaattaaaagttgatgttgaaacaaaattaaat
atgcttcgaggatcttttaatttagatgatgttaaaacagaaataaatatgaaaaaggga
gagaaatataaacaaaatataaaactagaagctttagaaaaagaagtacaaaaattgcag
ttattaagtattgtacaagccgaacttgacactgttatattaaataaaactggaattaat
aataagctcaaaatacttaaaaacaaagtaaatgatgtgttaaaagatttgcttggattt
atacctcaagaaaagctcaaatttgagtttacgtcatttttagataaattatctgataca
atcagatgcaatcgaataagtatagctgaaaaacaaaaacagttaactacactggaggct
aattataaccacactaaagacaaattgcgtacaaaacaaattgaactttctaatgatgag
aatgctttaagtgatatgtgtcaagatcaagaatatgaaacaatattaaaggaagtcaat
gaaaaagtagaagaattgcaagctcaaaaaggttctgtatcaacttctggtcatcttttt
aggcgatacataaaaaatttggaagctcaagatcctagttgtccattatgtcatcgatgc
tttggttctgttgatgaagtgactgaattaataaatgatttaaatatgagagtccaaaaa
attccaaatgaattagagaccacaattggacaattagaaatacttttagaaaagcaatca
aaacttcaacaattaagaccaacttatactcgaatatcagttttaaaacaaacagaaata
cctaatataaaggacgaacttgaacgtataagtaataatttaagaaaatatcgtgatgaa
ctaactaaattatcagatgaaaatggaaaactagaaactaacgaaacaaatgcaaagagt
atccaatctgatataataatgattgatagttttgaaaatgatgttaaacgatatttaaaa
gaagagcagcgtttggcaacaaaaatgagtgaatctggttccactagaaatcttcaagaa
gcaatttcagaaaaaaatcatttgaaaactactttaaatgaaatttgcaatattttggaa
aaaaaacagcatgaattgaatgaatattctgaaaacttacacaagttacaaatgcaacaa
aataaaataactaatgatgaattaaatataaagagtaaaatgcaagatgaaaagagtgta
atagacaaattgaaagatttacagaatcttgaagcaacattaagtttagaattagacaat
gccaaagaaacattagaaccagtacaagagaagttaaaaacatgtattaatacatttgaa
gaaactaaaaaacaacaaagaagtacaattgaaaataaaagaaaagaaataattattctt
gaaaaaaaaattcaagaaattaataacttacaatcttctattgatagttatgaaaaaaaa
ggatggactctacgaattaaggaaactaataatttattgaatagtttaattaaagaaaaa
atgaattacgttgaagaacagaaaaatttgcaaaaacaaattgatgctattaatgaatat
aatgccaatcaagaggttaaaaaaatagacttagaaaacaataaaaaattgagacaaaaa
tcaaaagaagaaattaaatgcttatctgaaataaacaaatttcatgaagatgttggaact
atggatgtggatagtttgttaaatgaaaaaacaaacaacaggaaaaaaattcaagcctta
tttgtcgaaaaaaataaatctcttggtagaaaacaagagctggataatatcattaagcat
ataacagaagagttgaaagctattcatttcaaaaatgctgaagacatatacttacatgaa
aaagtgcagttagaaatattaaatcgtgttgagaaagatttaactaartataacaaagct
cttgaatgggcaatgaataggtttcacaaagaacgaatgcaaagtattaatagtattatt
aaaaagttatggagagatatttatactggcaatgacattgactatattcaaataaaaaca
tcttctgatgataagccaatacataccgatacaattaaaaaaagagtctttaactatagg
gttattcagataaaaaatgaagttgaattggatatgcgaggaagatgcagtgctggccaa
aaagttttggcatgcttaattgtaaggatggcattagcagaaactttcagtaaaaattgt
ggtatactagcattagatgagcctacaacaaatttagatgaatctaacattcaaagctta
gcagaatcattatcagaaattataacacgacgcagctctcaaaaatcattccaattactc
atcattactcatgatccaaatttcttacgtaaattatctgccagagacatggtcgataca
tactatgaagtgaaaagaagtaatgaggggatgtccattgtatgtgaacaagatataaaa
tacttaccctaa
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integrated database retrieval system