Diuraphis noxia (Russian wheat aphid): 107172958
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Entry
107172958 CDS
T04900
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03082
ATP-dependent chromatin remodeling
dnx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107172958
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107172958
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dnx01009
]
107172958
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107172958
03036 Chromosome and associated proteins [BR:
dnx03036
]
107172958
Protein phosphatases and associated proteins [BR:
dnx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107172958
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107172958
SWI/SNF complex
107172958
Chromosome and associated proteins [BR:
dnx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107172958
PBAF complex
107172958
SWI/SNF complex
107172958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF3937
Motif
Other DBs
NCBI-GeneID:
107172958
NCBI-ProteinID:
XP_015378769
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRTITNDERKRLI
DLGKYLFAFXGMINFNFLYDYLYLIFFFLILILKESKGKKSVPWVPSLPNSSHLDAVPQA
TPINRNRIIQKKVRTFPLCYDDTDPANIHENANFSELLVPIRLDMEIEGQKLRDTFTWNK
NESLITPEQFAEVLCDDLDLNPLPFVPAIAQSIRQQIEAFNNDNILDEQHDQRVIIKLNI
HVGNTSLVDQVEWDMGEKDNSPEQFAMKLCAELGLGGEFVTAIAYSIRGQLSWHQRTYAF
SEAPLSVVETPFRPPSDADQWSPFLETLTDAEMEKKIRDQDRNTRRMRRLANTTPGCKLT
RLP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcactccggacatacggcgacaagccaatcagtttccaggtagaagagaatggcgaa
tactactgcattggatccgaggtcggcaattacttgcgactgttccgtggttctttgtat
aaacggtatccgggaatgtttcgcaggaccattacaaatgatgagaggaaacgtttaatt
gatttgggtaagtacctatttgcattttaaggaatgataaatttcaattttctttacgat
tacctatatttaatatttttttttttaattttaattctcaaagaatctaaagggaaaaaa
tctgttccgtgggttccatcattaccaaatagttcacatttggatgctgttcctcaggct
actcccattaaccgtaataggattatacaaaaaaaagtcaggacttttccactatgctat
gatgatactgatccggccaacattcatgagaatgccaacttttctgaattgttggttcca
attagacttgatatggaaattgaaggacaaaaattgagagatacatttacttggaacaaa
aatgaaagtttaataactccagagcagtttgctgaagtgttatgtgacgatttagatttg
aaccctttgccatttgtaccagctattgcacaatctatacgtcagcaaattgaagcattt
aataatgataatattttagatgaacaacatgaccaaagagttattatcaagttaaacatt
catgttggtaatacatcattagtggatcaagttgaatgggacatgggtgaaaaagacaat
tcgcctgaacagtttgccatgaaactatgtgccgaattaggacttggtggagaatttgta
actgccattgcgtactccatcagagggcaattgagctggcatcagcgtacctatgctttc
agtgaagcaccattgtcagttgttgagactccgtttagacccccatcagatgctgaccaa
tggagtccattcctagagacattgacagatgcagaaatggaaaagaagataagagatcaa
gacaggaatactaggcgaatgcgacgactggccaacacyacaccaggatgtaagttaact
cgtctaccgtga
DBGET
integrated database retrieval system
