Diuraphis noxia (Russian wheat aphid): 107173307
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Entry
107173307 CDS
T04900
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107173307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dnx03019
]
107173307
Messenger RNA biogenesis [BR:
dnx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107173307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
nSTAND3
AAA_22
AAA_27
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
107173307
NCBI-ProteinID:
XP_015379279
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MARHRNIRTTQYSDDEYYDDDDDYSNSFEDDCISPSDAIYLINHKSKFDSDQDLTDAKVN
SCLQRVTEILGFELAKDVVAGHLINNEFNIDKTVDQIINSKISSTKVKDQQPADGRLSRP
PSVVIASSSKNKDNIIVGFGNASISGSKNKNLIATPKQTPFSTPICSPAATPRNRSPQNV
RLGSPRVDRKLNSPKSNKVRBNQDLSTSIHKDQLYLIIIGHVDAGKSTLMGHLLYKLGHI
QQRTIQKYEHESRKLGKQSFLYAWVLDETAEERNRGITMDVGHLKFETKTKDVTLLDAPG
HKDFIPNMITGASQADATMLVVDATKGEFETGFDSGGQTREHALLIRSLGITQLGVAVNK
MDTVNWSEERFEEIKTKLGLFLKQAGYKESDVTFVPCSGLSGENLATKANEALLTRWYNG
PCLMDVIDSFKPPERAISKPLRLCISDVFKSSGSGFSIVGRIETGQLRVGDKVLVQPQGE
VAQIKSIEIDELPQPIGLAGDFISVSLTGYDAQTIYSGCVLCDISLPIPVTSVLEARVVV
FNVDFPIVRGHQIVLHYQSSSESAVVSRLLAELNKSTGEVIKKNPRMIKKNTHALIKINL
SRPICVEIYSDIRQLGRXMLRSGGTTIAAGLVTKVNFNK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccacaggaacatacggaccacgcaatattccgatgatgaatattatgatgat
gatgatgattattcaaattcatttgaagatgactgtatttctccaagtgatgcaatctat
ttaattaatcacaaatccaagtttgattcagatcaagatttaactgatgccaaagttaat
tcatgtttacaaagagtaacagaaattttgggctttgaacttgccaaggatgttgtagca
ggacatttaattaataatgaatttaatattgataaaactgttgatcaaataataaattca
aaaattagttctacaaaagtaaaggaccagcaacctgctgatgggaggttaagtagacct
ccttctgttgttattgcttcttcatcaaaaaataaagacaacatcattgttggttttgga
aatgcatctatttcagggtcaaaaaataagaacttaatcgcaacacctaaacaaacacct
tttagcacacccatatgctcaccagctgcaacacctcgcaaccgatctcctcaaaatgtt
cgtttaggatcaccacgtgtagatcgcaaattaaattcgcccaagagcaacaaagttaga
rataatcaagatttatcaacgtccattcataaagatcaactttatttaattataattggt
catgtcgatgctggaaaaagtactctaatggggcatttactgtataaattaggacatata
caacagcgaaccatacaaaagtatgagcatgaaagtagaaagttaggtaaacagagtttt
ctctatgcttgggtattagacgaaactgctgaagaaagaaaccgtggtattacaatggac
gtaggtcatttgaagtttgaaacaaaaactaaagatgttactctgctagatgcgcctgga
cataaagattttataccaaatatgattacaggagcttctcaggctgatgcaactatgtta
gttgtagatgcaactaaaggagaatttgaaactggatttgacagtggagggcagacacga
gagcatgccctcttaatacggtctctgggaattactcaactcggagttgcagtaaataaa
atggatactgttaactggtctgaagaacgatttgaggagatcaaaacaaaacttggactg
tttttgaaacaagctggttacaaagaatctgatgttacttttgtaccatgctccgggtta
agcggtgaaaatttagctacaaaagcaaatgaagcattgctaacccgttggtataatggt
ccttgtttaatggatgttattgattcatttaaaccacctgagcgggcaatttctaaacca
ttaaggttatgtataagtgatgtttttaaaagttcaggatcaggattttcaattgttgga
cgaattgaaacaggacagcttagagttggtgataaagttttggtacagccacagggagaa
gtcgcacaaattaagagtattgaaatagatgaattgccacagccaattggattagctggt
gactttatcagtgtttcacttactggttatgatgctcaaactatttactctggttgcgtt
ttgtgtgacatttcattaccaataccagtaacatcagttttagaagcacgagtggttgta
tttaatgtggacttccccattgttcgtgggcatcagattgtattgcactatcaaagttca
tcagaatcagcagttgttagtagacttctagcagaactaaataaaagtactggtgaagtc
atcaagaaaaatcctcgaatgataaaaaaaaatactcatgctctaatcaaaataaatcta
tcaaggccaatttgtgtagaaatatattcagacatcagacaattgggtagartaatgtta
cggtctggtggtactactatagcagctggtcttgttacaaaagtcaattttaataaataa
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