Diuraphis noxia (Russian wheat aphid): 107173347
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Entry
107173347 CDS
T04900
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107173347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnx03041
]
107173347
03009 Ribosome biogenesis [BR:
dnx03009
]
107173347
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107173347
Spliceosome [BR:
dnx03041
]
Complex A
U1 snRNP components
U1 related factors
107173347
Complex B
107173347
Ribosome biogenesis [BR:
dnx03009
]
Eukaryotic type
Pre-60S particles
Helicases
107173347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Imm64
Motif
Other DBs
NCBI-GeneID:
107173347
NCBI-ProteinID:
XP_015379342
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MFAQGLRVVKSAILNPIHVKSISNRQQLLTEKITVMSYARNGTGGGRSNGSYGGQRSSYG
GGGGGGGRGGMGGAKKNPGANLQAPNWDRVQLRPFKKEFYVPHPTIERRSYEEVDKYRTG
KDITVMSSDRSPVPYPIQHFKEANFPDYVMTVIRNEGFTEPTPIQAQGWPIAMSGKNMVG
VAQTGSGKTLGYTLPAVVHINNQEPLKKGDGPIALVLAPTRELAQQIQKVAGLFNQSTYL
RSTCIYGGAPKSHQARDLMNGVEIVIATPGRLLDFLESRATNLQRCTYLVLDEADRMLDM
GFEPQIRKIIQQIRPDRQVLMWSATWPKEVQKLANDFLSDYIQLNVGSLTLSANHNILQN
VDVCQEHEKEDKLMDLLQDIANMEENKTIIFAETKRKVDTITRKITNMGARAVGIHGDKS
QSERDHVLKQFRNGRANILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSS
QKGTSYAFFTHSNSKQAKDLVAVLTEANQRIDPKLAAMAARSFPSGGNKWYGGGGGGGNR
SWGGGRPAHRKF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcaaggattgagagtcgtcaagtccgccatattgaatccaattcacgtgaaa
tccatatctaatcgtcaacagttgcttactgaaaaaattaccgtaatgtcttatgcaagg
aatggtactggtggtggaagaagtaatggttcttatggaggccaacgatcatcatatggt
ggtggtggtggtggtggtggtcgaggtgggatgggtggtgccaagaaaaatccaggtgcc
aatttacaagcccccaactgggaccgtgtccaactaagaccatttaagaaagagttctat
gttcctcatccaactattgaaagaagatcttatgaagaagttgataaatatagaactgga
aaagatatcactgtaatgagctcagacaggagccctgttccttatccaattcaacatttt
aaagaagcaaattttcccgactacgttatgacagttattcgtaatgaaggttttactgaa
cctactcctattcaagcacaaggttggcctattgcaatgagtggcaaaaacatggttgga
gtcgcccaaactggttctggaaaaactttgggttatacattgcctgctgtagtacatata
aataatcaagaacctttgaaaaaaggagatggcccaattgctttagttttggctcctact
agagagttagcccagcaaatacagaaagtcgctggattattcaatcagtccacatattta
cggtcaacatgtatttatggtggtgctcctaaatctcatcaggctagagatttaatgaat
ggtgttgagattgttattgctacaccaggtcgtctattagatttcttagaatctcgtgca
accaatttgcaacgttgtacctatttagtattggatgaagctgaccgtatgcttgacatg
ggttttgaacctcaaattagaaaaatcattcaacaaattagacctgaccgacaagttttg
atgtggtcagccacgtggcctaaggaagttcagaaattagccaatgatttcttaagcgat
tacattcaattgaatgttggttcattaacattatctgccaaccacaacattttacaaaac
gtggatgtgtgtcaagaacatgaaaaagaagacaaattaatggatttattacaagacata
gctaatatggaagaaaataaaactattattttcgctgaaaccaagaggaaagtggataca
ataacacgtaaaataactaatatgggggcaagggctgttggaattcatggagacaaatca
caatctgagcgtgaccatgtgttgaaacaattcagaaatggaagagctaatattttggtt
gctactgatgttgctgccagaggtttagatgtcgatgacgttaagtttgttattaatttt
gattatcccaacaactctgaagattatattcayagaataggcagaactggacgatcgtca
caaaaaggtacctcatatgcattcttcacccattctaayagcaaacaagccaaagacctt
gtggctgttttaactgaagccaaccaacgtattgatcccaaattagctgccatggctgca
cgttctttcccaagtggtggtaacaaatggtatggcggcggtggcggtggtggaaacaga
tcttggggaggcggaagaccagctcacagaaaattttaa
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