Diuraphis noxia (Russian wheat aphid): 107173448
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Entry
107173448 CDS
T04900
Name
(RefSeq) collagen alpha-1(III) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx04382
Cornified envelope formation
dnx04512
ECM-receptor interaction
dnx04518
Integrin signaling
dnx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107173448
04518 Integrin signaling
107173448
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107173448
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107173448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dnx04147
]
107173448
00536 Glycosaminoglycan binding proteins [BR:
dnx00536
]
107173448
Exosome [BR:
dnx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107173448
Glycosaminoglycan binding proteins [BR:
dnx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107173448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Chitin_bind_4
Motif
Other DBs
NCBI-GeneID:
107173448
NCBI-ProteinID:
XP_015379481
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MHLQRDGKMSLRPCTNMCLILFAIFGIQLAFSQQTNPNDLEVVLNIEDSNKTQYHXQNFD
TMAYIFGYEVGPNGQFHHENKGPDGFTYGCYGYVDPEGKLQATHYISDGWGYRVVTPGES
VEIFHHKHDPADENQANESSEGGSEHEHHGHHGVVTAWGDLYFPKGCGGGRPIQGTGQLG
GSGSSGYPSFVGIGQPGAAGTPGSPGSPGSPGSPGSPGSPGYGGSPGSGGSPGSPGSPGS
PGSPGYGGSPGSGGSPGSGGSPGSPGSPGSPGSPGSPGSPGSPGYGGSPGFGGYPGSGGS
PGSPGSFGKPGYPGSPGSPGSPGSPGSPGSPGSPGSPGSPGSLGYPGQGSPGSPGSPGSP
GSPGSPGSLGYPGLGTPGSPGSPGSPGSPGSPGSGSPGSFGYPALGSPGSPGLPGSPGSP
GAPGSPGSLVYPVSGSPGSFGYPGSQGSPGSPGAPGAPGSPGSPGVSGYPGSLGYPGTGS
PGSFGYPGTPGTPGTPGSPGKPGKPGSGSPGGSPGSFGYPGTPGSPGLPGSPGAPGSPGS
LGYPGTGSPGSFGYPGTSGSPGSPGSPGSPGSPGSPGKPGSPGSGFPGSFGYPGTPGSPG
SPGSPGAPGSLGSLGYPGTGSPGSFGYPGTSGSPGSPGSPGSPGKPGSPGSLGYPGSGSP
GLFGYPGTPGSPGSPGSPGTPGSPGSLGYPGSGSTGSFGYPGSQGSPGSPGVPGSPGSPG
FPGSHGKPGYPTTPGSLGYPGSGSPGSFGYPGTPGSPGSPGSPGLPGSPGLPGKPGSGLS
SYPKPGSPGFPGSPGSPGLPGQPGQPGLPGSPSSVYPSPPGPQGPSGSLGATGSPGLPSL
PSYQKPTVYPTSTYPGSSGSPGSPGFPGAPGLPGKPGSPGFPSYQQPSLYPSSSYPSAQG
SAGLPGTPGIPGAPGLPGSPGSSLYNRPSSYPSGPGSPGLPGSPGLPGTPGLPGSYQKPT
QYPGTLYPSGSGAPGSPGTPGYPGLPGQPGTPGLSGSSPYPKPSYPVAPGSPGTPGSPGF
PGLPGKPGSYVPQSSYPGSAYPGTPGQPGLPGTPGLPGKPGASVIPSIPSEKPQPTYQKP
NSGYPGSPGQPGTPGLPGAPGLPGTISYPKPTPPSTYPVGPGQSGYPGSPGLPGQPGTPG
LPGSVYQPSYQKPTSVNQYGNPTLYPGSSYPGSQGLPGTPGLPGQPGTPGTPGSAYPGST
LNQTPNYQSVKPSSQGYPSSSYPGSPGQPGTPGLPGQPGTPGIPSQPSYQKPNPPTYPAK
PTYPPQPSYSGYPGSSGQPGKPGTPGTPGTPGTPGLPAGPPYQKPTPPPAGYPGSPGKPG
QPGIPGLPGIPXQSFGQNPQTSVDYGKPNPSGYPGSTGQPGLSGQPGTPGTPGTPGIPGS
YPTLPKPSSSPINSGSGSVSGSPSNGYPSSIDQTQTGYPNKPVSQPSYPSQNYVYPTSYP
QRPDIPDYGAQQPNEYPGYLSSGYPVPPPPNAPLPNYPPPSSPSGYNGYFELYPGQNQIY
SGQPDSNVYPAGNQYSFNGYPEQQFTYPAKENKGKTPQITTPVSTSTLGYTSKSSQTTVQ
YPKTPSLIDIRVNVPNEPQFNDGQKSVNLGKNELIGPSSGSSGYSSSLTPQYVNSPTKAP
KLPYQFGQESNQVVLSSSKPESSTPLYSVTSKISSTPENINSVESSSTISYEDQFSTLSP
DSSTPVNIIPYPLPIVPNPGSCPCYFVPPTNNNSSNLLQQQQPTFDLNNLPEGAVIGFVP
VVFYPSCGAGSVASKEILSSKLEPVFPSAYQVPYKCSYCEQSESQTATIRSSFNQVLKQS
QLNPSVVIKSPSRKNYPNAPIYDQQEFGKKIKVVNRKTNDE
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgcayctgcaacgggacggcaaaatgtctctgagaccgtgtacaaacatgtgtttaata
ctgttcgcaatttttgggattcagttggctttttctcagcaaactaacccaaatgatttg
gaagtggtgcttaacattgaagatagcaacaaaactcaataccatgakcaaaatttcgat
accatggcctatatattcggctacgaagtaggtccaaatggtcaattccatcacgaaaat
aaaggtccagatggattcacatatggttgctacggatatgtagacccagaaggaaaatta
caagcaactcattatatatctgatggctggggatatagagttgtcacgccaggtgaatct
gtagaaatattccatcataaacatgaccctgcagatgaaaatcaagctaatgaaagttct
gaaggtggttctgaacacgaacatcatggacaccatggagtggtaacagcgtggggtgat
ctttatttcccaaaaggttgtggaggaggacgtccaattcaaggtacaggtcaattgggt
ggatcaggctcatcaggataccctagttttgttggaattggtcaaccaggagcagcaggt
acacctggatctccaggttctccaggatctcccggttctccaggatcaccaggttcccct
ggatatggaggttctccaggatctggtggctctccaggatctcccggttctccaggatca
ccaggttcccctggatatggaggttctccaggatctggtggctctccaggatctggtggc
tctccaggatctccaggatcaccaggatctccaggatcacctggatctccaggatcacca
ggttcccctggatatggtggttctccaggatttggtggctatccaggatctggtggatct
ccaggatcccccggttcattcggtaaaccaggatacccaggatcaccaggatcacccgga
tccccaggatcacctggatccccaggctcaccaggatcacccggatccccaggctctcca
ggatcacttggttatccaggacaaggatctccaggttccccaggatcaccaggctctcca
ggatcaccaggctctccaggatcacttggctacccagggttaggaacaccaggctctcca
ggctctccaggatcaccaggctccccaggctcaccagggtcaggatcaccaggatcattt
ggctatccagcattaggctcaccaggttcaccaggcttaccaggctcaccaggatcacca
ggtgcaccaggatccccaggatcacttgtttacccagtatcaggatctcctggatcattt
ggttaccctggctcacaaggatctccgggttcaccaggagctccgggagctccgggatca
ccaggttcaccaggggtatcaggatatccaggatcacttggttacccaggaacaggatct
ccaggatcatttggctatccaggcactccaggcacaccaggcacaccaggctcaccaggc
aaaccaggcaaaccaggatcaggatctccaggaggatctccaggatcatttggctatcca
ggcacaccaggctcgccgggtttaccaggatcaccaggtgcaccaggatccccaggatca
cttggttacccaggaacaggatctccaggatcttttggctatccaggcacatcaggctca
ccgggttcacccggctcaccgggctcaccgggctcaccgggctcaccaggcaaaccagga
tctccagggtcaggatttccgggatcatttggctatccaggtacaccaggctcaccgggt
tcaccaggatcaccaggtgcaccaggatccctaggatcacttggttacccaggaaccgga
tctccaggatctttcggctatccaggcacatcaggctcacctggctcaccgggttcacca
ggctcaccaggcaaaccaggatctccagggtcacttggttacccaggatcaggatctccg
ggattatttggctatccaggcacaccaggctcaccgggctcaccaggctcaccaggcaca
ccaggatccccaggatcacttggttacccaggatcaggatctactggatcatttggttat
ccyggttcacaaggatctccgggttcaccaggagttccgggatctcctggctcaccagga
ttcccaggttcacatggtaaaccaggatatccaaccacaccaggatcactcggataccca
ggttcaggatctccaggatcatttggctatccaggcacaccgggctctccaggctcacca
ggatctccaggcttaccaggatcaccaggattacctggcaaaccaggttcaggattatca
tcatacccaaaaccaggatccccaggattcccaggatccccagggtctccaggactccca
ggtcaaccaggtcaaccaggattaccgggaagtccatcttcagtttatcctagtcctcca
ggaccacaagggccatcaggttctttaggtgctacaggtagcccaggactacctagctta
ccatcttatcaaaaaccaacagtttatccgacatccacttatcccgggagctcaggttct
ccaggctccccaggtttcccaggagctccaggcttaccaggtaaaccaggatctccaggc
tttccttcatatcaacaaccatccctttaccctagttcatcttatcctagtgcacaaggc
tcggcaggtttaccaggaacaccaggaattccaggkgctcctggattgccaggttcacca
ggatcatctttatataacagaccctcgtcatacccaagtggtccagggtcaccagggtta
ccaggttcaccgggattaccaggaacaccaggtctgcctggttcataccaaaaaccaaca
cagtacccaggaacattataccctagcggatcaggagctccgggatcaccaggcacacca
ggctacccaggattaccaggccaacctggaaccccaggattatcaggttcttcaccctat
ccgaaaccttcataccctgtagctccaggttcaccaggtacaccaggatctccaggtttt
cccggtctaccaggaaaaccaggatcttatgttccgcaatcttcatacccaggatccgct
tatccaggcaccccaggtcaaccaggcctgccaggaactccagggttaccaggtaagcca
ggagcatcagttataccaagtataccgtctgaaaaaccacaaccaacctatcaaaaacca
aattcagggtaccccggaagcccaggtcaaccaggtactccaggtttaccaggagctcca
ggattaccaggtacaatttcatacccgaaacccacaccaccatctacatatcccgttgga
ccaggtcaatcaggataccctggatctccaggacttccaggccaacccggaacaccaggt
ctacctgggtctgtataccaaccctcatatcaaaaaccaacttccgttaaccaatatgga
aatcctactttatatccaggatcttcatatcctggaagtcaaggattacccggaacacca
ggattaccaggtcaaccaggtacacctggaacaccagggtccgcttatccaggttctacg
ttaaatcaaacacctaattatcaatctgtgaaaccaagctctcagggatatccaagttct
tcatatccaggaagtccaggtcaaccaggtaccccaggattaccaggtcaaccaggaact
ccaggtataccaagccagccgtcttatcaaaaaccaaatccaccaacatacccagctaaa
ccaacatatcctcctcaaccatcttattctggttaccccggaagctcaggtcaaccagga
aaaccaggaactcctggtacaccaggtacaccaggcacaccaggccttcctgcgggaccg
ccttaccaaaaacctactcccccacctgctggatatccaggttctcctggtaagccagga
caaccaggaatccctggtctcccaggcattccagmtcaatcatttggtcaaaatcctcaa
acttcggttgactacggaaaacctaatccatcgggatatcccggttctactggtcaacca
ggcctttccggtcaaccaggcactccaggaactccaggaaccccaggaatcccaggttct
tatcccactttaccaaaacccagctcatctccaataaattcaggcagtggaagtgtatca
ggttcaccatctaatggttatccatcatcaatcgatcaaactcaaacaggttatccaaat
aaacctgtttctcaaccatcatacccgagtcagaactatgtttaccctaccagctatcct
caaagaccagatattcctgactacggagcacagcaaccaaatgaatatcctggatattta
agttccggttatccagtacctccacctcccaacgcaccacttcctaattacccaccacct
agttcaccatctggttacaatggttattttgagttgtacccgggtcaaaatcaaatatac
tcaggtcaacctgattctaatgtatacccagctggtaatcaatattctttcaatggttat
cctgaacaacaatttacttaccctgcaaaagaaaacaaaggtaaaacgcctcaaataact
acacccgtttcaacttcaacattgggttatacaagcaagtctagtcaaactactgtgcaa
tatccaaaaacgcctagtttgatagatatacgtgttaatgtgccaaatgaacctcaattc
aacgatggtcaaaagtccgtaaatttaggtaaaaacgaattaataggaccatcgtcagga
tcatctggatattctagctcacttactccacaatacgtgaatagtcctacaaaggcaccc
aaattaccatatcaatttggtcaagaatcaaaccaggtagtcttatcatcaagcaaacca
gaatccagtactccgttgtatagtgtaacctctaaaatatcatcgacacctgaaaatatt
aattcagtggaatcaagcagtaccatatcatatgaagatcaatttagtactctttcacca
gattcttcgacacctgtcaatataattccttatcctttgccaattgtgcctaacccagga
tcttgcccatgctattttgtccccccaacaaataataattcttccaatctattgcaacaa
cagcaaccaacgtttgacttaaacaatctccctgagggtgctgttattggatttgtgcca
gtagtattttatccatcatgtggagcaggaagtgtagcatcaaaagaaatactgtcatct
aagttagagcctgtttttccgtcggcttatcaagtaccatataaatgttcgtattgcgaa
caaagtgaatcacaaactgcgaccatcagaagcagttttaatcaagtactaaaacaaagt
caattaaatccatccgttgtaataaaaagtccaagtagaaagaattacccaaacgcccca
atttatgaccaacaagaatttggaaaaaagataaaagttgtaaacagaaaaactaatgat
gaataa
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