Diuraphis noxia (Russian wheat aphid): 107173964
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Entry
107173964 CDS
T04900
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107173964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dnx03021
]
107173964
03019 Messenger RNA biogenesis [BR:
dnx03019
]
107173964
Transcription machinery [BR:
dnx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107173964
RNA polymerase I system
107173964
Messenger RNA biogenesis [BR:
dnx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
107173964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
KOW5_SPT5
KOW2_Spt5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
KOW7_SPT5
Spt5_N
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
107173964
NCBI-ProteinID:
XP_015380224
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MSDYDSDQVSDRGGSGSEPEEDSNPRYRRQASSRSASRSHSPSGSEAEENNHEEEVADEQ
EPEGEDLNSEDEYDEEEDEEDDRPGKKKKKNERFGGFIIDEADVDDEVEEDDDWEDGAGE
YGIVANEVDELGPTAREIEGRRRGTNLWDTQNEDEIEEYLRKKYADASATIKHFGDAGEE
LADEITQQTLLPGVKDPNLWMVKCRIGDEKNTALLLMRKYIAYQFTEDPLKIKSIVSPEG
VKGYIYIESYKQTHVKSAIENVSSLKMGFWKQQMVPIKEMTDVLKVVKVQTGLRSKQWVR
LKRGLYKDDIAQVDYVDLAQNHVHLKLLPRIDYTRPRGALRASMDAEALKRKKKRRPAAK
PFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFYMNAITADGVKPTLSELEKFEE
APEGIDIELPVSNKDNSANSQSLSSGDNVEVCTGELINLQGKVLSIDGDMVTIMPKHDDL
KMPLEFMANELRKFFKQGDHVRVVGGRYEGDTGLIVRVEQNRIVLFSDVTMHELEVLPRD
LQLCSDXASGVDSLGQFQWGDLVQLDPQNVGVIVRIEREKMHILNMAGKLVEAKPQSLNK
KKEHRNTIGVDALGSSIQRKDIVKVIDGPHTGMHGEIKHLYRHHAFLYSRLMTDNGGIFV
CRLRHIALAGNSTNKQAITAPQNGFASPQITSPRHTPGSPFGAGGGGSGGRGGGGGGSGG
RFGGVRRDRDLIGQTIRITGGPYKGAVGMVKDATECTARVELHSSCQTISVDRRNITIVG
QQSKDGRLTSSYSRTPANVMMTPGYREGGKTPLQGSMTPNYEVGNRTPHFGSMTPSHDGS
KTPTQAWDPAAGYTPARVTDSDLEYPMDPGTPYAQTPNTLYGSSDHSYSPYQAISPSGGG
GYNSSNSYANTPSPINTSSPRSIQYHPAPSPSGSYASLMTPSSVSSPGLAAPSLTSFGLP
PGWQTTDIFVRIADSDLAGQTGIIRDVSEATCSVYLPEEERVVTIENDNLEPIMPKPSDY
VKVLCGSYRDRTGNMMAIEGSEGVVVMPDEKNPILIPLLHLCRAN
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattacgacagcgatcaagtgagtgatcgcggtggcagcggtagtgaacctgag
gaagattcaaatccgcgatatcgcagacaggcctctagtcgtagtgcaagtagaagtcat
tctccaagtggatctgaagcagaggaaaataaccatgaagaagaagtcgctgatgaacaa
gaaccagaaggggaggatttaaattcagaagatgaatatgacgaagaagaagatgaagaa
gatgaccgtccgggcaagaaaaaaaagaaaaatgaacgttttggcggttttattattgat
gaagcagatgtagatgatgaagtagaagaagatgatgattgggaagatggagctggtgaa
tatggtattgttgctaatgaggttgatgagttaggaccaactgcaagagaaattgaagga
cgcagacgtggaactaacctttgggacactcaaaatgaagatgagatagaagaatacttg
cgtaaaaaatatgcagatgcttcagctacaataaaacattttggagatgcaggagaagaa
ctagctgatgaaattacacaacaaacacttctgcctggtgttaaggacccaaatttatgg
atggtcaaatgtcgtattggtgatgaaaaaaataccgctttgttgttgatgaggaagtat
attgcgtatcagtttactgaagatccattgaaaattaaatcaatagtttctcctgaaggc
gttaagggttacatatacattgaatcctacaaacaaactcacgtaaaatcagccattgaa
aacgttagcagtcttaaaatgggattttggaaacaacaaatggtccctattaaagaaatg
actgatgttttaaaagttgttaaagtacaaactggcttgagatctaaacaatgggtcaga
ttgaaaagaggtttgtacaaagatgatattgctcaggtagattatgtagacttggcacaa
aatcatgtacatttgaaactattaccaaggatcgactatactagaccaaggggtgctctc
agggcttcaatggatgcagaggctttaaagagaaagaaaaaaaggcgtcctgctgctaaa
ccatttgatccagaagctatcagggctattggtggtgaagtcaccagtgatggtgacttt
ttaatatttgaaggaaatcgctacagccgtaaagggtttttatacaaaaacttctacatg
aatgcaataacagctgatggtgtcaaacctacactgtcagaacttgaaaaatttgaagaa
gctcctgaaggtatagatatagaattaccagtttcaaataaagataattcggcaaacagt
cagtccttaagttctggtgataatgtggaagtgtgtactggagagttgataaatttacaa
ggaaaagtgttatctattgatggagatatggtcactattatgcctaaacatgatgatctc
aaaatgccgctggaatttatggcaaatgaattgcgcaaattttttaaacaaggtgaccat
gttagagtagtaggaggacgttatgagggtgatactggactcattgttcgggtagaacaa
aatcgaatagtgttattttctgaygtcactatgcacgaacttgaagtattacctcgtgat
ttacaattgtgttcggacatkgcttctggagttgattcacttggacaattccaatgggga
gatcttgtacaattagatccacaaaatgttggcgtgatagtgagaattgagcgtgaaaaa
atgcatattttaaatatggcaggaaagttggttgaagctaaaccacagtctttaaataaa
aaaaaagagcacagaaatacaattggagttgatgctttaggaagttcaatacaaagaaaa
gatatcgttaaagttatcgatggaccacatacagggatgcatggtgaaattaaacatcta
tatcgtcaccatgcctttttgtattctcgtttaatgacagataatggaggaatatttgtt
tgtcgattaagacacattgccctagctggaaattcaaccaataaacaggctataactgca
cctcaaaatggttttgcatctcctcaaattacatctcctcgtcatacacctggtagtccg
tttggtgctggtggaggtggcagtggtggacgtggtggaggaggaggaggatctggaggt
agatttggaggcgttcgaagagacagggatttaattggtcagacaattagaatcacgggt
ggcccttacaaaggtgctgttggcatggtaaaagatgcaaccgagtgtacagctagagtt
gaacttcattcctcttgtcaaacaatatcggtggatcgaagaaatataacaattgttgga
caacaatctaaggatggaagattaacatcatcatactctagaacaccagctaatgtgatg
atgactcctggatatcgtgaagggggcaagactcctctacaaggttcaatgacacccaac
tatgaagttggtaaccgtacaccacactttggaagcatgactccatcacatgatggttct
aaaacacctactcaagcttgggaccctgctgctggttatactcctgcccgagtaactgac
agtgatttagaatatccaatggaccctggtactccttatgcacaaactccaaatacatta
tatggttcttcagatcattcttactcaccatatcaagcaatatcaccatcagggggtggt
gggtataacagtagtaattcttatgcaaacactccaagtccaatcaatacttctagccct
cgtagcatccaatatcacccagcaccatccccatcaggttcttatgcaagtttaatgact
ccatcatcagtgtcgtctccaggtttagcagctccttcattaacatcatttggtttacca
ccaggatggcagactacagatatttttgttcgtattgctgattcagatttggcaggacaa
actggtattataagagatgttagtgaagccacatgcagtgtttatttgcctgaagaagag
cgtgtagtcactatagaaaatgataatttggaacctattatgccaaaacccagtgattat
gtgaaagttttatgtggttcatacagagacagaacaggaaatatgatggcaattgaaggc
agtgaaggtgttgtagtaatgccagatgaaaaaaaccccatacttataccgctgttgcat
ttgtgcagggcaaattag
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integrated database retrieval system
