Desulfomicrobium orale: AXF15_01705
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Entry
AXF15_01705 CDS
T04289
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
doa
Desulfomicrobium orale
Pathway
doa03420
Nucleotide excision repair
doa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXF15_01705
03430 Mismatch repair
AXF15_01705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doa03400
]
AXF15_01705
Enzymes [BR:
doa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXF15_01705
DNA repair and recombination proteins [BR:
doa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXF15_01705
MMR (mismatch excision repair)
Other MMR factors
AXF15_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
RecR_HhH
AAA_30
AAA_12
Viral_helicase1
HHH
DEAD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMD91953
UniProt:
A0A109W5G8
LinkDB
All DBs
Position
363739..365913
Genome browser
AA seq
724 aa
AA seq
DB search
MLDYQNDLNPAQYEAVSTLDGPVLVIAGAGSGKTRTVVYRLAHLVERGVSPAEILLLTFT
RKASAEMLHRAGALLGHQNLGAVRGSTFHGFAFSLLKQYAGLLGFERGVSIMDRSDAEDM
LGEARDRLRIGRGDRKFPKRGTILSLISKSRNKELPLEQILRREAYHLGAYAEDMARLDE
EYTRMKRECGLLDYDDLLFMLERLLTDFPHVRQAVTSSISHIMVDEYQDTNLVQARLTGL
LAPPDQDRPNILAVGDDAQSIYAFRGADVRNILNFPNLFPETRIIKLEQNYRSTQPILEL
TNAILDGFRDKFGKKLFSDRQDSRLPEYIQPFSDRSQARLVTAKIAELSREYPLDQIAVL
FRAGYQSYHVEVELNKIGLPFRKYGGIKFSEAAHIKDVLACLRLSLNAADLPAWQRMLGN
IPGIGPKSAQKIHHAVMVNDQNFLRAQCSKKPALTELLGVLDTLRAQVMKPATAIGFILE
YYTPVLREKFSDDYPRREAGLEELAQIALGYEDTASFLGDLSLDSPDAEEARGPAVTLST
VHSAKGLEWEAVLVIDLVEDRFPSRHALGDSEAFEEERRLLYVACTRARAHLSLFSPETL
YSREASTSMPARPSSFLQDIPPHLFTRYREQFTGGLAPQSAPIRTGTGRTDSFPDAADLN
ISAPDGEYASAPRQTGQTPVQGTFCRHKIFGRGKVIARVEPNKYKINFPGFGLKLIIEDF
VELE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactaccagaacgatctcaatccggcccagtacgaggccgtctccaccctggac
ggcccggtgctggtcatcgccggagccggatcgggcaagacccggactgtcgtctaccgc
ctggcccacctggtggaacgcggcgtttcacccgccgaaattctccttctgacctttacc
cgcaaggcttcggccgaaatgctgcatcgcgccggagcccttcttggccaccagaatctg
ggcgcggtacgcggaagcaccttccacggcttcgccttttccctgctcaaacagtacgca
ggactgctcggattcgagcgaggcgtgtccatcatggacagaagcgacgccgaggacatg
ctgggcgaggccagggaccggctgcgcatcgggcgcggagaccgcaagttccccaaacgc
gggaccatcctctccctcatcagcaaaagccggaacaaggagctgccgctggagcagatt
ctccggcgcgaggcgtaccatctgggcgcctacgccgaggacatggcccggctggacgag
gagtatacccgcatgaagcgggaatgcggcctgctcgactacgacgatcttctgttcatg
ctggagcgtctgctgacggattttccgcatgtgcgacaggccgtgacatcgtccatctca
cacatcatggtggacgaatatcaggacaccaatctggtccaggcccggctgacgggcctg
ctggctccgccggatcaggaccggcccaacattctggccgtgggcgacgacgcccagtcc
atctacgccttccggggagccgatgtccgcaacatcctgaacttcccgaatctcttcccg
gaaacccggatcatcaagctggagcagaattaccgctccacccagcccattctggagctg
accaacgccattctggacggcttccgggataaattcggcaaaaaacttttctccgaccgt
caggattcccgcctgcccgaatacatccagcccttttccgaccgcagccaggccagactg
gtcacggccaagatcgcagagctcagccgggaataccccctggaccagatcgcggttctg
ttcagggccgggtaccagtcctaccatgtggaagtggagctgaacaaaatcggcctgcct
tttcgcaaatacggcggcatcaagttttccgaggccgcgcacataaaggatgtgctggcc
tgcctgcgcctgtccctgaacgccgccgacctgcccgcctggcagcgcatgctcggcaac
attccgggcatcggccccaaaagcgcccagaaaatccaccatgcggtcatggtcaacgac
cagaatttcctgcgcgcccaatgctccaaaaagcccgccctgacggagcttctgggcgtg
ctggacaccctgcgcgcccaggtaatgaaaccggccacggccatcggcttcattctggaa
tactacacgccggtcctgcgggaaaaattttccgacgactatccgcgccgggaagcggga
cttgaagagctggcccagatcgccctgggctacgaggacacggcctcctttctgggcgac
ctgagcctggacagtcccgacgccgaagaagcgcgcggtccggcggtcacgctgtccacg
gtgcattcggccaaggggctggaatgggaggccgtgctggtcatcgatctggtggaggac
cgtttcccgtcccgccacgctctgggcgacagcgaagccttcgaggaggaacggcggctt
ctgtacgtggcctgcaccagggctcgcgcgcacctgagcctgttttcgccggaaaccctg
tacagccgggaggcgtccacctccatgcccgcccggcccagctcctttctgcaggacatc
ccgccgcatttgttcacccgctaccgcgagcagttcacgggcgggcttgccccgcaatcc
gcgcccatccggaccggaacaggacggacggactcttttccggacgcggcggatctgaac
atttccgcgccggacggcgaatacgcctccgcgccgcgccagacaggccagacgcctgtt
cagggaaccttctgccgccacaagatcttcggccggggcaaagtcatcgcgcgggtggag
cccaacaaatacaagatcaattttccgggcttcggcctgaaactcatcatcgaggatttc
gtggagctggaatga
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