Desulfomicrobium orale: AXF15_01880
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Entry
AXF15_01880 CDS
T04289
Name
(GenBank) hypothetical protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
doa
Desulfomicrobium orale
Pathway
doa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AXF15_01880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doa03400
]
AXF15_01880
Enzymes [BR:
doa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AXF15_01880
DNA repair and recombination proteins [BR:
doa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AXF15_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AMD91986
UniProt:
A0A109W5H1
LinkDB
All DBs
Position
413877..417113
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AA seq
1078 aa
AA seq
DB search
MRHFFLYTSNRLEHLALVLAQVTAEPLDPMRPETILVQSAGMQRWVSMQLAREHGVWANA
RFPFPVAFAYDLARALLPGLPEEYPLSQERMLWRVASLLPGLADRPEFASVRRYLDGADT
LKLIQLARKIAFHFDQYLIFRPRWAALWESGRTCGETHGDPGAEAWQAVLWRETAKGREQ
EHRAALLRRVMEALRQKPAVLPPRLSVFGISTLPPAYLDLLLALAEHVPVHMFLLSPSRQ
YWGDLPGQRERLREYRLLTEHGVPPQEEVENPLAGLGALGRDFHDLLAAGGVEEMPLYRD
FSAPRTLLEHVQQDLLELSPVPGSLPDLDGESIQVHCCHSPMREMETLQDIILDRLQRDE
TLTPRDILIMAPDMDLYAPFIQTVFGAPEDPSRFLPFSMADRRPSQTQTHARLLLELLEF
GLSRFEATAVLDLLEAPAIRQALQLDETDVSRIREWVDEARIRWGADPDFQSQTGGVLYP
QNTWEQGLARLFLGYMTGPGGLPVRGVSPLGPLGGDDQELLGRLAAFLDQLRQMRDFLGI
PAGAGEWRQRLLWMLDTFFPRDRDTVDVLCGLRQSVTALVQAMSVGAPEIIVDSRAMLHL
LRERLDAAPAEGGFLSSGLTFCGLRPMRAIPFRVICLAGLSSTGFPRQDTRPGFDLMAAS
PRPGDRSLRDDDRYLFLESLISARDALILTYPGLSPRDNSESPPSVLVSELLDYLDSRAR
VSGWLPSEALVTRHRLQGFHPDYFRSGSPLFSFSEQNCRGARALCGQPVSRPFFPADAFP
EVWPASCPEISLGELEDFLSHPVRCLLRTLGVRPAMPDGEIPDEEPLAVPDGLDGFGLNQ
DLLNFMLAGNPPESAVRERLRAGQGLPPGPAGQEAIREMYAQVSDQAARIRMEQGGEKPV
FHDLALDLGTCRITARLPLLAGGAGWRMVAFRAVKLKGADMLRLWVRHLAAGAAGLSAAS
VHVARDDIFTAPEVSKEQAARILRDLVRLRMSGMSAPLPLFPRASLIYARRRFDAKNGDM
ESALNEARKDWLGGYSTRAEREDPFLRAAYRDAEPDWEAFAAVTEAVYGPLLGGDRDP
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcgccattttttcctgtacacctcgaatcgtctggaacatctggcgctcgtgctggcc
caggtcacggccgagcccctcgatcccatgcgtcccgagaccattctggtccagtccgcg
ggcatgcagcgctgggtgtccatgcagctggcccgcgaacacggcgtctgggccaatgcc
cgttttccctttcccgtcgcttttgcctacgatctggcccgcgccctcctgcccggcctg
cccgaggaataccctctgtctcaggaacggatgctctggcgcgtggcgagccttctgccc
ggtctggccgacaggccggaattcgcgtcggtcagacgctatctggacggcgcggacacg
ctcaagctgattcagctcgcccggaaaatcgccttccatttcgatcagtatctgatcttt
cgtccccgctgggcggccctctgggagtccggccggacctgcggggaaacgcacggcgac
cccggcgcggaagcctggcaggccgtcctgtggcgggaaacggccaaaggccgcgaacag
gagcatcgtgcggccctgctgcggcgggtcatggaggcgctgcggcaaaaacccgccgtc
ctgccgccgcgcctgtccgtgttcggcatttccaccctgccgcccgcgtatctggatctt
ctgctggctctggccgaacatgttcccgtgcacatgtttctgctcagcccgtcccgccag
tactggggcgatttgcccggacagcgggaacgcctgcgggagtaccgcttactgactgag
cacggcgtaccgccgcaggaggaggtcgaaaaccctctggccggactgggcgcgcttggg
cgggactttcacgatctgctggccgccggcggcgtggaggaaatgccgctgtaccgggat
ttctccgccccgcgcacgctgctggagcacgtccagcaggatcttctggagctttcgccc
gtgccgggctccctgcccgatctggacggcgaatccattcaggttcactgctgccacagc
cccatgcgtgaaatggagacgcttcaggacatcattctggaccgtctgcagcgcgacgaa
accctgaccccgcgggacatactgatcatggccccggacatggacctctacgcgcctttc
atccagaccgtgttcggcgcgcccgaggacccgtcccgtttcctgcctttttccatggcc
gaccgcagaccgtcccagacgcagacccacgcccgtctcctgctggaacttctggaattc
ggcctctcccgtttcgaggccacggccgtgctggatctgctggaagctccggccatccgc
caggcgcttcagctggacgaaacggatgtttcgcgcatcagggaatgggtggacgaggcc
agaatccgctggggcgcggatccggactttcagtcccaaaccggaggcgtcctctaccct
cagaacacctgggaacaggggctggcccggctctttttgggatacatgaccggccccggc
ggcttgccggtgcggggagtttccccgctggggcccctcggcggagacgatcaggaactg
ctggggcgtcttgcggcctttctggaccagctccgccagatgcgggattttctgggtatc
ccggccggggctggagaatggcggcagcgcctgctgtggatgctggacaccttcttcccc
cgggacagggacacggtggatgtcctgtgcggcctgcgccagtccgtcacggctctggtc
caggccatgagcgtcggcgcgccggaaatcattgtggacagccgggccatgctgcacctg
ctgcgcgagaggctggacgcggctccggccgagggcggctttctgagttcggggctgacc
ttttgcggtctgcgtcccatgcgggccattccgtttcgggtcatctgcctggccgggctg
tcctccacgggctttccgcgtcaggatacccgccccgggttcgatctcatggccgcctcg
ccccgccccggagaccgcagcctgcgcgacgacgacaggtacctgtttctggaaagcctg
atctccgcgcgggacgccctcattctgacctatcccggcctttctcccagggacaacagc
gagtcgcccccgtcggtactggtgtccgaacttctggattatctggacagccgcgcccgg
gtgtccggctggctgccgtccgaggctctggtcactcgccaccggctgcagggctttcat
cccgactatttccgctccggcagccctcttttttccttttccgaacagaactgccgggga
gccagggccttgtgcggccagcccgtgtcccggcccttttttccggcggatgcgttcccg
gaggtctggccggcttcctgcccggagatttctctgggcgagctggaagattttctgagt
caccccgtgcgctgcctgctccgcaccctgggggtacggcctgccatgccggacggggaa
attccggatgaagaaccgctggccgtgccggacggtctggacgggttcggcctgaatcag
gacctgctgaatttcatgctggccggaaatccgccggaatccgccgtgcgggagcggctg
cgcgccggacagggcctgccgcccggcccggccggacaggaggccatccgggaaatgtat
gcccaggtcagcgatcaggccgcccggatacggatggagcagggcggggaaaagcctgtt
ttccacgatttggcgctcgatctgggtacatgccggataacggccagactgcccctgctg
gcgggcggagcggggtggcgcatggtcgccttccgggccgtcaaactcaaaggggcggac
atgctccggctctgggtccgccatctggcggccggggctgccgggctttccgccgcatcg
gtccatgtggccagagatgacattttcacggccccggaggtgtctaaggagcaggccgcg
cgcatcctgcgggatctggtccggctgcgaatgtcgggcatgagcgcgccgctgcctctt
tttccccgcgcgtccctgatttacgcccgcagacgcttcgacgcgaaaaacggcgatatg
gaaagcgctctgaacgaggcccggaaagactggctggggggctattccacccgcgccgag
cgggaagacccgttcctgcgcgccgcataccgggacgccgaacccgactgggaagccttc
gcggccgtgaccgaagccgtgtacggcccgctgcttggaggcgatcgtgatccgtga
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