Desulfomicrobium orale: AXF15_04070
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Entry
AXF15_04070 CDS
T04289
Name
(GenBank) hypothetical protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
doa
Desulfomicrobium orale
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
doa03016
]
AXF15_04070
Enzymes [BR:
doa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AXF15_04070
Transfer RNA biogenesis [BR:
doa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AXF15_04070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AMD92366
UniProt:
A0A0X8JP92
LinkDB
All DBs
Position
910407..912443
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AA seq
678 aa
AA seq
DB search
MLIPSPLQPGCIVEFLQDNQPVTAWVLDIQGPRLRVFTIGQREMKLPATRVLPWVGPQCA
PGASRQDMLDLLRTHHGRRERVAEEVDALEIWELAQGELAEAEIGWFASLVFEDPAPDQM
AGLGRKLLQTKTHFRFSPPRFEIYSQEVVDRRQEELRKAQERERLVGFGQVFLRGLWEAF
CNRKNTAPQPDEEQAERIGKLLMTRIVSPDDRDSEMLWRTMSQGLPDDPFLPLYLAQAWG
LVPAHFNVYLARAQYDWEPRWEEYAAELRALRERVEKLKTAPVAEIVTIDAPTTRDIDDG
FSLEATADGFILRQALACPPFGWEFGSPLDSAVQHRFSSLYLPEGTSHMLPEELGTDFFS
LVGGTERPALVITFDLDSEAGLRRVMPEIGWVRVAANLTYAGVEEDLARGGSLMMEEARR
LAGLLRAARIREHAVILEQPDPYLTLCGDSGHPEVTVDEPSPAPDAQMIVSEFMILANKA
MGAWGLVEGVPLLYRTQNITLPAECAGVWRDPVDIYRIINNMGPSILECEPRRHATIGAE
AYAPMTSPLRRYSDFINMAQILARLTGTGRLLDRTGLENLLPVLSGRAEAVNQVQRLRVR
YWKYEYFRQNYKKMRWSGVLVDAGPVLVTIALPELQLFLKAPRKIFGDKFHPGQRFSVRV
GKVDPLAGEIRIAEAWEE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcccttctccactccagccaggctgcattgtggagtttctgcaggacaaccag
cccgtcacagcctgggtactggacatccagggcccccggctgcgcgtcttcaccatcggc
cagcgggagatgaaactgcccgccacccgtgttctgccctgggtggggccgcagtgcgcg
cccggagccagccgccaggacatgctcgaccttctgcgaacccatcacggccgccgtgag
cgcgtggccgaggaagtggacgctctggaaatctgggagctggctcagggcgaattggcc
gaggccgaaatcggctggttcgcgagcctcgttttcgaggaccccgcgccggatcagatg
gccggtctggggcgcaagcttctgcaaaccaagacacatttcaggttttcgccgcccagg
ttcgaaatttattctcaggaggtggtggaccgcagacaggaggaactgcgcaaggctcag
gagcgcgagcgtctggtgggcttcggtcaggtttttctgcgcggcctgtgggaggccttc
tgcaaccgcaagaatacggccccgcagccggacgaggagcaggccgagcgcataggcaag
ctgctcatgacccgcatcgtaagtcccgacgaccgggattccgaaatgctgtggcggacc
atgagccaggggctgcccgacgatcccttccttcccctgtacctggcccaggcttggggg
ctcgtacccgcccatttcaacgtgtacttggccagagcccagtacgactgggagccccgc
tgggaggagtacgcggcggagctgcgcgccctgcgggagcgcgtggaaaagctgaagacc
gctccggtggcggaaatcgtgaccatcgatgcccccaccaccagggacatcgacgacggc
ttcagccttgaagccacggcggacggttttattctgcgccaggccctggcctgcccgccg
tttgggtgggaattcggctctcccctggacagcgccgtacagcaccgcttttcctcgctg
tatctgcctgagggcaccagtcacatgctccccgaagaactggggacggactttttcagt
ctggtcggcggtacggaacgtccggccctggtcattaccttcgatttggacagtgaggcc
ggtttgcggcgggtcatgccggaaataggctgggtgcgcgtcgcggccaacctcacctat
gctggcgtggaagaggatctcgcccgcggtggctctctcatgatggaggaggcccggcgt
ctggccggacttctgcgggccgcccgcatccgcgaacacgccgtgattctggaacagccg
gatccgtatctgaccctgtgtggagactccggacacccggaggtgaccgtggacgaaccc
agcccggcccccgacgcccagatgatcgtgtccgagttcatgattctggcgaacaaggcc
atgggagcctggggcctcgtggaaggggtgcctcttctgtaccgcacccagaacatcacc
ctgcccgccgagtgcgccggagtctggcgcgatcctgtggacatctaccggatcatcaac
aacatgggcccttccattctggaatgcgaaccccggcggcacgccaccatcggggccgaa
gcctacgctcccatgacttcccccctgcggcgctattccgatttcatcaacatggctcag
attctggcccggttgaccggaacagggcgtcttctggaccggaccggactggaaaatctg
ttgccggttctgtcgggccgggccgaagccgtaaatcaggtgcagcggttgcgggtgcga
tactggaaatacgagtacttccgccagaattacaaaaagatgcgctggtccggtgttctg
gtggacgcaggccctgtgctggtgaccatcgccctgccggaactgcagctttttctgaaa
gcgccgcgcaagattttcggcgacaagttccatcccggccagcgtttttccgtgcgtgtg
ggcaaagtggacccgctggccggagaaatccgcattgccgaagcctgggaagaatga
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