Desulfomicrobium orale: AXF15_04320
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Entry
AXF15_04320 CDS
T04289
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
doa
Desulfomicrobium orale
Pathway
doa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXF15_04320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doa03400
]
AXF15_04320
Enzymes [BR:
doa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AXF15_04320
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AXF15_04320
DNA repair and recombination proteins [BR:
doa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXF15_04320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7351
Motif
Other DBs
NCBI-ProteinID:
AMD92411
UniProt:
A0A0X8JPC8
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All DBs
Position
962143..962961
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AA seq
272 aa
AA seq
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MPELPEVETIARGLDAQASGQRIVKARLITPKVLLRGKPEMLEGRSIRRVVRRAKLLMAM
LDNEDALIFHLKMTGRVWLAAARQPLPKHTHLVLELESGDRVIFEDQRRFGYFGLFSPAE
LETWDFHVSLGPEPLSISPEELAARLKGRRSAIKSLLLNQTVVAGVGNIYADESLFAARI
HPASTASAIPEKRLLLLCAELQRILLAAIEAGGSTFSDYRNAYGKSGIFQEFFQVYGKKG
EPCPACRRPLVAATVAGRTSTHCSRCQRRYHG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgccggaagtggaaaccatcgcccggggcctggatgcccaggccagcggc
cagcgcatcgtcaaggcgcgcctgatcacgccgaaggtcctgctcaggggaaagccggaa
atgctggaaggccggagcatccgccgcgtcgtgcggcgggccaagctgctcatggccatg
ctggacaatgaagacgccctgatttttcatctgaaaatgaccggccgggtctggctggcc
gccgcgcgccagccgttgcccaagcacacccatctggtgctggaactggaaagcggggac
cgcgtgatcttcgaggaccagcgccgtttcggctatttcggcctgttcagcccggccgag
ctggaaacatgggatttccatgtaagcctcggccccgagccgctctccatcagcccggag
gaactggccgcccggctgaaaggacggcggagtgccatcaaaagcctgctcctgaatcag
accgtcgtggccggtgtcggcaacatctacgccgacgagtccctgttcgcggcccgaatc
catccggccagcacggcttcagccattccggaaaaacggctgctcctgctgtgcgcggaa
ctgcagcgcatcctgctggcggccatcgaggcgggcggcagcaccttcagcgactaccgc
aatgcctacgggaaaagcggcatctttcaggaattcttccaggtttacggcaagaagggc
gaaccctgcccggcctgccgccgcccgctggtcgcagccaccgtggccgggcgcacatcc
acccactgttcccgctgccagcgccggtatcacggctga
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