Desulfomicrobium orale: AXF15_05180
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Entry
AXF15_05180 CDS
T04289
Name
(GenBank) DNA-binding protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
doa
Desulfomicrobium orale
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
doa03019
]
AXF15_05180
Messenger RNA biogenesis [BR:
doa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AXF15_05180
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Paralog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AMD92563
UniProt:
A0A0X8JQA9
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All DBs
Position
1143222..1144304
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AA seq
360 aa
AA seq
DB search
MAHKKTFIRDLTAGQNISDIFALSQAQRREARNGPYWQLTLTDRTGGMEARIWAPQSLQY
ENLKPEQFVAVTGQIASFKDQLQMNVTDLVLVEPAGAGLDLTDFLPSSAVPPAELLAEIE
AFLDRELSFKPWRTLCAKVLADADIRAALLTAPGAKSVHHAHAGGLLEHTLGVMRVCAAL
AALYPSVDREILLTAALFHDLGKAFELTHGFSREYTDAGRLIGHIQMGLEALEPFLRAAK
DLPEGLAVHLKHLILSHHGELEFGSPRRPKTVEAFILHYADNLDAKINTVNTALENTADP
EDVEASHWSEYHRTLGRYLYQPMRTPRTETASDARSAAKKTAPRPKSALLRAMGIADPEE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaagaaaaccttcatccgcgacctgactgcggggcagaatatctcggacatc
ttcgctctgtcgcaggcacagcgccgggaagcccgaaacggcccctactggcagctgact
ctgaccgaccgcacgggcggcatggaggcccgcatctgggctccgcagagcctgcaatac
gaaaatctgaagccggaacaatttgtcgccgtgaccggacaaattgcgtcgttcaaggac
cagctgcaaatgaacgtcacggatctggttcttgtggagccggccggggcggggctcgat
ctgaccgacttcctgccgtcctcggccgtgcctcctgcggagctgctggcggaaatagaa
gcctttctggacagggagctgtccttcaaaccctggcgcaccctgtgtgcgaaagtcctg
gccgacgcggatatccgcgctgctctgctcacggctccgggagccaaatccgtccatcac
gcccatgccggcggtctgctggagcacaccctcggtgtcatgcgcgtctgcgcggccctg
gcggccctctatccttccgtggacagggagattcttctgacagccgccctctttcacgat
ctgggcaaggcctttgaactgacccatggcttcagccgggaatacaccgacgccgggcgg
ctcatcgggcacatccagatggggctggaagccctggagccttttctgcgggcggccaaa
gatcttcccgaggggctggccgtgcacctgaaacatctgatcctttcccatcacggcgaa
ctggaattcggttctccccgccggccgaagactgtggaggcattcatcttgcactatgcc
gacaacctggacgccaagatcaatactgtgaacacggctttggaaaatacggctgatccg
gaagacgtcgaggccagccactggagcgaataccaccgcactttgggccgttatctgtat
caacccatgcgcacgccccggacggaaacggcttccgacgcccgttcggccgccaaaaaa
acggcgcccagaccgaaatccgccctgctcagggccatgggcatagccgacccggaggaa
tag
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