Desulfomicrobium orale: AXF15_06130
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Entry
AXF15_06130 CDS
T04289
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
doa
Desulfomicrobium orale
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
doa03032
]
AXF15_06130
03400 DNA repair and recombination proteins [BR:
doa03400
]
AXF15_06130
Enzymes [BR:
doa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AXF15_06130
DNA replication proteins [BR:
doa03032
]
Prokaryotic type
DNA Topoisomerases
AXF15_06130
DNA repair and recombination proteins [BR:
doa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXF15_06130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
AMD92721
UniProt:
A0A109W5U9
LinkDB
All DBs
Position
complement(1358645..1360879)
Genome browser
AA seq
744 aa
AA seq
DB search
MSKDLIIVESPAKIKTIKKFLGSGYEVEASVGHVRDLPSKTLGVDEEHDFAPDYQIIPGK
AKVVSRLKAAAREADTVYLAPDPDREGEAIAWHVAEIIRGANSNLKRIQFNEITARAVKD
ALAHPTELRKSLFDSQQARRILDRLVGYKISPLLWKNVKRGLSAGRVQSVALRLIVDRER
ERQAFVSEEYWVFKATLQGGAPPAFEADLWKVDQAKPVLGNAEDAGTLEKRIAGQPFIVE
DITQKERQRHPRPPFITSTLQQEASNRLGFNAKRTMSVAQRLYEGVELEGRGTTALITYM
RTDSVRVSDEAREAAKDWIGRNLGPDFLPGKPRVYKSKGGAQDAHEAIRPVDPALTPDEV
KSSLPAEQYRLYRLIWQRFMASQAASARFWDTVVTIQSGPAQWRAKGEQLIFPGFLSVSP
AQEADASALPELRQGQELRLEKLHKEQKFTQPPARFSEASLVHKLEELGIGRPSTYAAII
STLTERDYVHIEDRQFLPTDLGVIVCDLLLEHFARLMDTGFTARMEERLDQVAEGGEDWV
QLLRNFTQDFYPLLDKARETMTQLKAGMDTGLSCPQCEDGRLTMKFGKNGMFLGCSNYPA
CSFTSNYTRDEQGEIRIAEAEAAEDKGPCSDCGTGRLVVKKTRAGGRFVACTNYPECRHA
ESVSTGVPCPREGCSGELVEKSSRRGKVFFSCNTYPKCDYAVWDYPVAKPCPLCGSKILV
RKETKKGTYLACPLKECGFREKPE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacttaatcatcgtcgaatcgcccgccaaaatcaaaaccatcaagaaattc
ctgggcagcgggtatgaagtggaagcctccgtgggccatgtgcgcgacctgccctccaaa
actctgggagtggacgaggagcacgacttcgcccccgactaccagatcattcccggcaag
gccaaggtggtcagcagactgaaggccgccgccagggaagcggacacagtgtatctggct
ccggatccggaccgcgagggcgaggccatcgcctggcatgtggctgaaatcatccgcggc
gccaactccaatctgaaacggattcagttcaatgaaatcacggccagggccgtgaaggat
gccctggcccaccccacggaactgcgcaaatcccttttcgattcccagcaggccagacgc
attctggaccgtctggtaggctacaaaatttctcccctgctctggaaaaacgtcaaacgc
ggcctttcggcgggccgggtccagtccgtggccctgcgcctcatcgtggaccgggaacgc
gagcggcaggcgttcgtgtccgaagagtactgggttttcaaagccacgcttcagggcggc
gcgcctccggccttcgaggccgacctgtggaaagtggaccaggccaagcccgtcctcggc
aatgccgaagacgccgggacactggaaaaacgcatcgccgggcagcccttcattgtggaa
gacatcacccagaaggaacgccagcgccatccgcgcccgccgttcatcacctccactttg
cagcaggaagcaagcaaccggctcggcttcaacgccaaacggaccatgtccgtggcccag
cgcctctacgagggcgtggaactggaagggcggggcactacggcgctcatcacctatatg
cgtacggactcggtgcgcgtttccgacgaggccagagaggcggccaaagactggatcggc
cggaacctggggccggatttcctgcccggaaaaccccgcgtgtacaaaagcaagggcggc
gctcaggatgcgcacgaagccatccggccggtggacccggctctgactccggacgaggtg
aaaagctcgctcccggcggaacagtacaggctctaccgcctcatctggcaacggttcatg
gcgtcccaggcggcatcggcccgcttctgggatacggtggtgaccatccagagcggcccg
gcccagtggcgggccaagggcgagcaactcatctttccgggttttctgagcgtttccccc
gcgcaggaagcggacgcgtccgctctgcccgaactgcggcaagggcaggaactgcgtctg
gaaaagctgcacaaggagcagaaattcacccagcctccggccagattctccgaagcgtcc
ctggtgcacaaactcgaagaactgggcatcggccggccgtccacctatgcggccatcatc
tccaccctgaccgagcgtgattatgtccacatagaggacaggcagtttctgcccacggat
ctgggcgtcattgtctgcgacctgcttctggagcatttcgcgcggctcatggacacgggc
ttcacggcgcgcatggaggaacggctggatcaggtggccgaggggggcgaagactgggtg
cagctgctgcgcaacttcacgcaggatttttatccgctgctggacaaggcccgcgaaacc
atgacccagctcaaggcaggcatggacacgggtctttcctgcccgcaatgcgaagacggc
cgcctgaccatgaaattcggcaagaacggcatgtttctgggatgctccaactatcccgcc
tgctccttcaccagcaactacacccgcgacgagcagggtgaaatccggatcgcggaagcg
gaagccgccgaagacaaaggcccctgctccgactgcggcaccggacggctggtagtgaag
aaaaccagggccggcggacgctttgtggcctgcaccaattatcccgaatgccgccacgcg
gaatcggtctccacgggcgtgccgtgccccagagaaggctgcagcggggagctggtggaa
aaaagcagccgccggggcaaggtctttttttcatgcaacacgtatcccaaatgcgactac
gcggtatgggactatcccgtggccaagccctgccctttgtgcggatcgaagatactggtc
cgcaaggagaccaagaaaggcacctatctggcctgcccgctcaaggagtgcggcttccgg
gaaaagccggaatag
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