Desulfomicrobium orale: AXF15_08030
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Entry
AXF15_08030 CDS
T04289
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
doa
Desulfomicrobium orale
Pathway
doa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXF15_08030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doa03021
]
AXF15_08030
03019 Messenger RNA biogenesis [BR:
doa03019
]
AXF15_08030
Transcription machinery [BR:
doa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AXF15_08030
Messenger RNA biogenesis [BR:
doa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXF15_08030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA
AAA_22
AAA_25
ATPase_2
OB_RNB
AAA_2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AMD93047
UniProt:
A0A0X8JQD6
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All DBs
Position
1753800..1755047
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AA seq
415 aa
AA seq
DB search
MNLSELKTKSMPELMDIASGYQIENLSGLRKQELIFALLQACASQNGSIFGEGVLEILPD
GFGFLRSPMYSYMPGPDDIYVSPSQIRRFGLRTGDVISGQIRPPKEGERYFALLRVKEIC
FREPEEAKKIVLFDNLTPIYPDQQFRLENGDKNYSARIMDLMTPIGMGQRGLIVAPPRTG
KTMLLQTIANSISVNHPDAYLIVLLIDERPEEVTDMERTVKAEVISSTFDEPPQRHVQVA
EMVLEKAKRLVERKVDVVILLDSITRLGRAYNATTPSSGRVLSGGLDANALQRPKRFFGA
ARNIEEGGSLTIISTALIDTGSRMDEVIFEEFKGTGNADIYLDRHLSDKRVFPAIDLNRS
GTRKEDLLLDPDVLNKVWILRRVMAPMNSVDSMDFLLDKMRGTKSNKDFLEVMNS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgtccgagttgaaaaccaagtccatgccggagctcatggacatcgccagcggg
tatcagatcgagaatctgagcgggctgcgcaaacaggagctgattttcgcgttgctgcag
gcctgtgcctcccagaacggctccattttcggggagggagtgcttgaaattctgcccgac
ggctttggttttctgcgttcgcccatgtacagctacatgcccggtccggacgatatttat
gtctcgccgtcgcagatcaggcgtttcggtctgcgtacgggggatgtcatttcaggacag
attcgccctcccaaggaaggcgagcgctattttgctctgctcagagtcaaggaaatctgt
tttcgcgagcctgaggaggccaagaaaatagtcctctttgacaacctgacacccatctat
ccggatcagcagttccggctggaaaacggcgacaagaattattccgcccggatcatggac
ctcatgacgcccatcggcatgggccagcgcggcctcatcgtggcgccgccccgcaccggc
aagaccatgctcctgcagaccatcgccaactccatcagcgtcaaccaccctgatgcctat
cttatcgtgctgctcatcgacgaacgacccgaagaagtcacggacatggagcgcacggtc
aaggccgaggtcatcagctccacattcgatgaaccgccccagcgccatgtgcaggtggcc
gaaatggtgctggaaaaggccaaacgcctggtggagcgcaaggtggacgtggtcattctg
ctcgattccatcacccgcctgggccgggcctacaacgccaccacgccgtcatcgggccgg
gtgctgtccggcggtctggacgccaatgccctgcagcggcccaagcgctttttcggcgcg
gcccggaacatcgaggaaggcggcagcctgaccatcatctccacggccctcatcgacacg
gggtcgcgcatggatgaagtcattttcgaggaattcaagggtacgggcaacgcggacatc
tatctggaccgccatctttcggacaaacgggtgttcccggccatcgacctgaaccgctcc
ggcacgcgcaaggaagacctgctgctcgatcccgacgtgctgaacaaggtctggattctg
cgccgggtcatggcccccatgaactccgtggacagcatggactttctgctggacaagatg
cgcggcaccaagagcaacaaggattttctggaagtgatgaactcctga
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